RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 UQCC3Q6UW78 93 aa10.17□□□□□ -0.78
CPSF1-205ENST00000531042 C20orf203Q8NBC4 194 aa10.17□□□□□ -0.78
CPSF1-205ENST00000531042 DPH3P1Q9H4G8 78 aa10.17□□□□□ -0.78
CPSF1-205ENST00000531042 NIT2Q9NQR4 276 aa10.17□□□□□ -0.78
CPSF1-205ENST00000531042 BIN3Q9NQY0 253 aa10.17□□□□□ -0.78
CPSF1-205ENST00000531042 FAT3Q8TDW7 4589 aa10.16□□□□□ -0.78
CPSF1-205ENST00000531042 IGLV10-54A0A075B6I4 117 aa10.16□□□□□ -0.78
CPSF1-205ENST00000531042 BCL2P10415 239 aa10.16□□□□□ -0.78
CPSF1-205ENST00000531042 WDR73Q6P4I2 378 aa10.16□□□□□ -0.78
CPSF1-205ENST00000531042 CLRN3Q8NCR9 226 aa10.16□□□□□ -0.78
CPSF1-205ENST00000531042 PGLYRP4Q96LB8 373 aa10.16□□□□□ -0.78
CPSF1-205ENST00000531042 TMEM243Q9BU79 118 aa10.16□□□□□ -0.78
CPSF1-205ENST00000531042 PKHD1L1Q86WI1 4243 aa10.16□□□□□ -0.78
CPSF1-205ENST00000531042 IGLV4-60A0A075B6I1 120 aa10.15□□□□□ -0.78
CPSF1-205ENST00000531042 TRAV8-4A0A0B4J246 113 aa10.15□□□□□ -0.78
CPSF1-205ENST00000531042 CTRLP40313 264 aa10.15□□□□□ -0.78
CPSF1-205ENST00000531042 NUDT10Q8NFP7 164 aa10.15□□□□□ -0.78
CPSF1-205ENST00000531042 NUDT11Q96G61 164 aa10.15□□□□□ -0.78
CPSF1-205ENST00000531042 OXTP01178 125 aa10.14□□□□□ -0.79
CPSF1-205ENST00000531042 RPL37AP61513 92 aaKnown RBP10.14□□□□□ -0.79
CPSF1-205ENST00000531042 SDIM1Q6ZPB5 146 aa10.14□□□□□ -0.79
CPSF1-205ENST00000531042 CNFNQ9BYD5 112 aa10.14□□□□□ -0.79
CPSF1-205ENST00000531042 GFRA4Q9GZZ7 299 aa10.14□□□□□ -0.79
CPSF1-205ENST00000531042 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.14□□□□□ -0.79
CPSF1-205ENST00000531042 PANO1I0J062 215 aa10.13□□□□□ -0.79
CPSF1-205ENST00000531042 hDV102S1A0JD36 115 aa10.12□□□□□ -0.79
CPSF1-205ENST00000531042 TAGLN2P37802 199 aaKnown RBP10.12□□□□□ -0.79
CPSF1-205ENST00000531042 CNBPP62633 177 aaKnown RBP10.12□□□□□ -0.79
CPSF1-205ENST00000531042 COTL1Q14019 142 aa10.12□□□□□ -0.79
CPSF1-205ENST00000531042 TWIST1Q15672 202 aa10.12□□□□□ -0.79
CPSF1-205ENST00000531042 LYPD6BQ8NI32 183 aa10.12□□□□□ -0.79
CPSF1-205ENST00000531042 K7EN84 100 aa10.11□□□□□ -0.79
CPSF1-205ENST00000531042 UBE2L6O14933 153 aa10.11□□□□□ -0.79
CPSF1-205ENST00000531042 AMTP48728 403 aa10.11□□□□□ -0.79
CPSF1-205ENST00000531042 GATD1Q8NB37 220 aa10.11□□□□□ -0.79
CPSF1-205ENST00000531042 OCC1Q8TAD7 63 aa10.11□□□□□ -0.79
CPSF1-205ENST00000531042 RNASE7Q9H1E1 156 aaKnown RBP10.11□□□□□ -0.79
CPSF1-205ENST00000531042 RPP21Q9H633 154 aaKnown RBP10.11□□□□□ -0.79
CPSF1-205ENST00000531042 TRAV26-2A0A0B4J265 109 aa10.09□□□□□ -0.79
CPSF1-205ENST00000531042 SLPIP03973 132 aa10.09□□□□□ -0.79
CPSF1-205ENST00000531042 HNRNPA3P51991 378 aaKnown RBP10.09□□□□□ -0.79
CPSF1-205ENST00000531042 CIRBPQ14011 172 aaKnown RBP10.09□□□□□ -0.79
CPSF1-205ENST00000531042 SERTAD4-AS1Q5TG53 156 aa10.09□□□□□ -0.79
CPSF1-205ENST00000531042 AP5S1Q9NUS5 200 aa10.09□□□□□ -0.79
CPSF1-205ENST00000531042 GTSF1Q8WW33 167 aa10.08□□□□□ -0.8
CPSF1-205ENST00000531042 HMCN2Q8NDA2 5059 aa10.08□□□□□ -0.8
CPSF1-205ENST00000531042 IGHV3-64A0A075B6Q5 118 aa10.07□□□□□ -0.8
CPSF1-205ENST00000531042 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.07□□□□□ -0.8
CPSF1-205ENST00000531042 FOXA3P55318 350 aaPredicted RBP10.06□□□□□ -0.8
CPSF1-205ENST00000531042 SMIM15Q7Z3B0 74 aa10.06□□□□□ -0.8
CPSF1-205ENST00000531042 C15orf56Q8N910 161 aa10.06□□□□□ -0.8
CPSF1-205ENST00000531042 RPL39LQ96EH5 51 aaKnown RBP10.06□□□□□ -0.8
CPSF1-205ENST00000531042 TMEM218A2RU14 115 aa10.05□□□□□ -0.8
CPSF1-205ENST00000531042 GAGE12HA6NDE8 117 aa10.05□□□□□ -0.8
CPSF1-205ENST00000531042 NCR2O95944 276 aa10.05□□□□□ -0.8
CPSF1-205ENST00000531042 SMDT1Q9H4I9 107 aa10.05□□□□□ -0.8
CPSF1-205ENST00000531042 IGKV3OR2-268A0A0C4DH90 116 aa10.04□□□□□ -0.8
CPSF1-205ENST00000531042 TMEM250H0YL14 139 aa10.04□□□□□ -0.8
CPSF1-205ENST00000531042 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
CPSF1-205ENST00000531042 CHTF8P0CG12 524 aa10.04□□□□□ -0.8
CPSF1-205ENST00000531042 C10orf91Q5T1B1 145 aa10.04□□□□□ -0.8
CPSF1-205ENST00000531042 AMMECR1LQ6DCA0 310 aa10.04□□□□□ -0.8
CPSF1-205ENST00000531042 CFAP161Q6P656 301 aa10.04□□□□□ -0.8
CPSF1-205ENST00000531042 DPH3Q96FX2 82 aa10.04□□□□□ -0.8
CPSF1-205ENST00000531042 RNF185Q96GF1 192 aa10.04□□□□□ -0.8
CPSF1-205ENST00000531042 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.03□□□□□ -0.8
CPSF1-205ENST00000531042 A0A087WYN8 130 aa10.03□□□□□ -0.8
CPSF1-205ENST00000531042 IGKV2-29A2NJV5 120 aaPredicted RBP10.03□□□□□ -0.8
CPSF1-205ENST00000531042 A8MWL6 223 aa10.03□□□□□ -0.8
CPSF1-205ENST00000531042 H7C423 109 aa10.03□□□□□ -0.8
CPSF1-205ENST00000531042 APCSP02743 223 aa10.03□□□□□ -0.8
CPSF1-205ENST00000531042 PEA15Q15121 130 aa10.03□□□□□ -0.8
CPSF1-205ENST00000531042 FAM231DQ6ZW35 169 aa10.03□□□□□ -0.8
CPSF1-205ENST00000531042 SPACA4Q8TDM5 124 aa10.03□□□□□ -0.8
CPSF1-205ENST00000531042 SEC11CQ9BY50 192 aa10.03□□□□□ -0.8
CPSF1-205ENST00000531042 CARHSP1Q9Y2V2 147 aaKnown RBP10.03□□□□□ -0.8
CPSF1-205ENST00000531042 SDHAF1A6NFY7 115 aa10.02□□□□□ -0.81
CPSF1-205ENST00000531042 RNASEKQ6P5S7 137 aaKnown RBP10.02□□□□□ -0.81
CPSF1-205ENST00000531042 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.81
CPSF1-205ENST00000531042 FGF6P10767 208 aa10.01□□□□□ -0.81
CPSF1-205ENST00000531042 TRBV6-5A0A0K0K1A5 114 aa10□□□□□ -0.81
CPSF1-205ENST00000531042 FAM231BA6NCW3 169 aa10□□□□□ -0.81
CPSF1-205ENST00000531042 I3L3M4 83 aa10□□□□□ -0.81
CPSF1-205ENST00000531042 APOC3P02656 99 aa10□□□□□ -0.81
CPSF1-205ENST00000531042 RPS10P46783 165 aaKnown RBP10□□□□□ -0.81
CPSF1-205ENST00000531042 HIGD2BQ4VC39 106 aa10□□□□□ -0.81
CPSF1-205ENST00000531042 CT83Q5H943 113 aa10□□□□□ -0.81
CPSF1-205ENST00000531042 Q6ZRU5 148 aa10□□□□□ -0.81
CPSF1-205ENST00000531042 SVBPQ8N300 66 aa10□□□□□ -0.81
CPSF1-205ENST00000531042 PLAC8Q9NZF1 115 aa10□□□□□ -0.81
CPSF1-205ENST00000531042 F8W036 122 aa9.99□□□□□ -0.81
CPSF1-205ENST00000531042 ZNF25P17030 456 aaPredicted RBP9.99□□□□□ -0.81
CPSF1-205ENST00000531042 ADCYAP1P18509 176 aa9.99□□□□□ -0.81
CPSF1-205ENST00000531042 PMCHP20382 165 aa9.99□□□□□ -0.81
CPSF1-205ENST00000531042 CEBPGP53567 150 aa9.99□□□□□ -0.81
CPSF1-205ENST00000531042 SRSF3P84103 164 aaKnown RBP9.99□□□□□ -0.81
CPSF1-205ENST00000531042 COX6A2Q02221 97 aa9.99□□□□□ -0.81
CPSF1-205ENST00000531042 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
CPSF1-205ENST00000531042 GAS8-AS1O95177 125 aa9.98□□□□□ -0.81
CPSF1-205ENST00000531042 FOXI1Q12951 378 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms