RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 KIR2DL4Q99706 377 aa11.54□□□□□ -0.56
SF3B2-211ENST00000531041 MAP1LC3AQ9H492 121 aa11.54□□□□□ -0.56
SF3B2-211ENST00000531041 AMTP48728 403 aa11.53□□□□□ -0.56
SF3B2-211ENST00000531041 DNAH1Q9P2D7 4330 aa11.53□□□□□ -0.56
SF3B2-211ENST00000531041 IGLV2-18A0A075B6J9 118 aa11.52□□□□□ -0.56
SF3B2-211ENST00000531041 TCAPO15273 167 aa11.52□□□□□ -0.56
SF3B2-211ENST00000531041 NIT1Q86X76 327 aa11.52□□□□□ -0.56
SF3B2-211ENST00000531041 TMEM243Q9BU79 118 aa11.52□□□□□ -0.56
SF3B2-211ENST00000531041 K7EP13 123 aa11.52□□□□□ -0.57
SF3B2-211ENST00000531041 RAB5AP20339 215 aa11.52□□□□□ -0.57
SF3B2-211ENST00000531041 LINC01556Q5JQF7 62 aa11.52□□□□□ -0.57
SF3B2-211ENST00000531041 CHCHD5Q9BSY4 110 aa11.52□□□□□ -0.57
SF3B2-211ENST00000531041 LOC389332A0A1B0GUA5 103 aa11.51□□□□□ -0.57
SF3B2-211ENST00000531041 ESDP10768 282 aa11.51□□□□□ -0.57
SF3B2-211ENST00000531041 FCER1GP30273 86 aa11.51□□□□□ -0.57
SF3B2-211ENST00000531041 PKIAP61925 76 aa11.51□□□□□ -0.57
SF3B2-211ENST00000531041 CHCHD7Q9BUK0 85 aa11.51□□□□□ -0.57
SF3B2-211ENST00000531041 NBDYA0A0U1RRE5 68 aa11.5□□□□□ -0.57
SF3B2-211ENST00000531041 Q8N8P6 123 aa11.5□□□□□ -0.57
SF3B2-211ENST00000531041 NXT2Q9NPJ8 142 aaKnown RBP11.5□□□□□ -0.57
SF3B2-211ENST00000531041 TRAV9-2A0A087WT02 112 aa11.49□□□□□ -0.57
SF3B2-211ENST00000531041 TMEM262E9PQX1 116 aa11.49□□□□□ -0.57
SF3B2-211ENST00000531041 H7C423 109 aa11.49□□□□□ -0.57
SF3B2-211ENST00000531041 TTC32Q5I0X7 151 aa11.49□□□□□ -0.57
SF3B2-211ENST00000531041 Q6ZR54 194 aa11.49□□□□□ -0.57
SF3B2-211ENST00000531041 A0A087WX48 190 aa11.48□□□□□ -0.57
SF3B2-211ENST00000531041 K7EMI3 77 aa11.48□□□□□ -0.57
SF3B2-211ENST00000531041 TRGC2P03986 189 aa11.48□□□□□ -0.57
SF3B2-211ENST00000531041 IFI27P40305 119 aaPredicted RBP11.48□□□□□ -0.57
SF3B2-211ENST00000531041 GAGE6Q13070 117 aa11.48□□□□□ -0.57
SF3B2-211ENST00000531041 KMT2AQ03164 3969 aa11.48□□□□□ -0.57
SF3B2-211ENST00000531041 M0R2N4 97 aa11.47□□□□□ -0.57
SF3B2-211ENST00000531041 UBE2L6O14933 153 aa11.47□□□□□ -0.57
SF3B2-211ENST00000531041 IGHV3-30P01768 117 aa11.47□□□□□ -0.57
SF3B2-211ENST00000531041 IGHV3-33P01772 117 aa11.47□□□□□ -0.57
SF3B2-211ENST00000531041 IGHV3-30-3P0DP02 117 aa11.47□□□□□ -0.57
SF3B2-211ENST00000531041 IGHV3-30-5P0DP03 117 aa11.47□□□□□ -0.57
SF3B2-211ENST00000531041 MPV17L2Q567V2 206 aa11.47□□□□□ -0.57
SF3B2-211ENST00000531041 Q8N3U1 123 aa11.47□□□□□ -0.57
SF3B2-211ENST00000531041 C10orf126Q8N4M7 172 aa11.47□□□□□ -0.57
SF3B2-211ENST00000531041 C18orf32Q8TCD1 76 aa11.47□□□□□ -0.57
SF3B2-211ENST00000531041 KMT2CQ8NEZ4 4911 aaKnown RBP11.47□□□□□ -0.57
SF3B2-211ENST00000531041 A0A1B0GUV1 79 aa11.46□□□□□ -0.57
SF3B2-211ENST00000531041 PRSS3P2Q8NHM4 247 aa11.46□□□□□ -0.57
SF3B2-211ENST00000531041 KRTAP1-5Q9BYS1 174 aa11.46□□□□□ -0.57
SF3B2-211ENST00000531041 SACSQ9NZJ4 4579 aa11.46□□□□□ -0.58
SF3B2-211ENST00000531041 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
SF3B2-211ENST00000531041 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
SF3B2-211ENST00000531041 DNAH6Q9C0G6 4158 aa11.45□□□□□ -0.58
SF3B2-211ENST00000531041 LINC01546A6NGU7 62 aa11.44□□□□□ -0.58
SF3B2-211ENST00000531041 RBX1P62877 108 aa11.44□□□□□ -0.58
SF3B2-211ENST00000531041 Q8N976 141 aa11.44□□□□□ -0.58
SF3B2-211ENST00000531041 C20orf203Q8NBC4 194 aa11.44□□□□□ -0.58
SF3B2-211ENST00000531041 IBA57-AS1B1ANH7 110 aa11.43□□□□□ -0.58
SF3B2-211ENST00000531041 FGF6P10767 208 aa11.43□□□□□ -0.58
SF3B2-211ENST00000531041 LAGE3Q14657 143 aa11.43□□□□□ -0.58
SF3B2-211ENST00000531041 ORMDL2Q53FV1 153 aa11.43□□□□□ -0.58
SF3B2-211ENST00000531041 TMEM18Q96B42 140 aa11.43□□□□□ -0.58
SF3B2-211ENST00000531041 ZNF25P17030 456 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-211ENST00000531041 BTF3P20290 206 aaKnown RBP11.43□□□□□ -0.58
SF3B2-211ENST00000531041 AMMECR1LQ6DCA0 310 aa11.43□□□□□ -0.58
SF3B2-211ENST00000531041 MRPL52Q86TS9 123 aaKnown RBP11.43□□□□□ -0.58
SF3B2-211ENST00000531041 IGLV4-60A0A075B6I1 120 aa11.42□□□□□ -0.58
SF3B2-211ENST00000531041 SMAGPQ0VAQ4 97 aa11.42□□□□□ -0.58
SF3B2-211ENST00000531041 KLK12Q9UKR0 248 aa11.42□□□□□ -0.58
SF3B2-211ENST00000531041 HYDINQ4G0P3 5121 aa11.41□□□□□ -0.58
SF3B2-211ENST00000531041 ANGP03950 147 aaKnown RBP11.41□□□□□ -0.58
SF3B2-211ENST00000531041 RNASEKQ6P5S7 137 aaKnown RBP11.41□□□□□ -0.58
SF3B2-211ENST00000531041 FA2HQ7L5A8 372 aa11.41□□□□□ -0.58
SF3B2-211ENST00000531041 TIMM21Q9BVV7 248 aa11.41□□□□□ -0.58
SF3B2-211ENST00000531041 CSDC2Q9Y534 153 aaKnown RBP11.41□□□□□ -0.58
SF3B2-211ENST00000531041 LINC00614P0C842 121 aa11.4□□□□□ -0.58
SF3B2-211ENST00000531041 G0S2P27469 103 aa11.4□□□□□ -0.58
SF3B2-211ENST00000531041 RAB5BP61020 215 aa11.4□□□□□ -0.58
SF3B2-211ENST00000531041 RPL39P62891 51 aaKnown RBP11.4□□□□□ -0.58
SF3B2-211ENST00000531041 URB1-AS1Q96HZ7 61 aa11.4□□□□□ -0.58
SF3B2-211ENST00000531041 UBE2D4Q9Y2X8 147 aa11.4□□□□□ -0.58
SF3B2-211ENST00000531041 Q0VG73 95 aa11.39□□□□□ -0.59
SF3B2-211ENST00000531041 TMEM101Q96IK0 257 aa11.39□□□□□ -0.59
SF3B2-211ENST00000531041 AP5S1Q9NUS5 200 aa11.39□□□□□ -0.59
SF3B2-211ENST00000531041 PRR34Q9NV39 138 aa11.39□□□□□ -0.59
SF3B2-211ENST00000531041 TRAV8-3A0A0A6YYJ7 113 aa11.38□□□□□ -0.59
SF3B2-211ENST00000531041 C1orf134Q5TEV5 83 aa11.38□□□□□ -0.59
SF3B2-211ENST00000531041 C6orf223Q8N319 242 aa11.38□□□□□ -0.59
SF3B2-211ENST00000531041 OR5A1Q8NGJ0 315 aa11.38□□□□□ -0.59
SF3B2-211ENST00000531041 CYSLTR1Q9Y271 337 aa11.38□□□□□ -0.59
SF3B2-211ENST00000531041 DGAT2L7PQ6IED9 249 aa11.37□□□□□ -0.59
SF3B2-211ENST00000531041 ENHOQ6UWT2 76 aa11.37□□□□□ -0.59
SF3B2-211ENST00000531041 C2orf66Q6UXQ4 117 aa11.37□□□□□ -0.59
SF3B2-211ENST00000531041 LINC00269Q8N2A0 174 aa11.37□□□□□ -0.59
SF3B2-211ENST00000531041 SPANXA1Q9NS26 97 aa11.37□□□□□ -0.59
SF3B2-211ENST00000531041 PYGO1Q9Y3Y4 419 aa11.37□□□□□ -0.59
SF3B2-211ENST00000531041 NFE4Q86UQ8 179 aa11.36□□□□□ -0.59
SF3B2-211ENST00000531041 UBE2WQ96B02 151 aa11.36□□□□□ -0.59
SF3B2-211ENST00000531041 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
SF3B2-211ENST00000531041 LINC01549A6NIU2 74 aa11.35□□□□□ -0.59
SF3B2-211ENST00000531041 CRPP02741 224 aa11.35□□□□□ -0.59
SF3B2-211ENST00000531041 REG3AQ06141 175 aa11.35□□□□□ -0.59
SF3B2-211ENST00000531041 BAGE3Q86Y29 109 aa11.35□□□□□ -0.59
SF3B2-211ENST00000531041 ZNF664Q8N3J9 261 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms