RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 KRTAP4-5Q9BYR2 181 aa10.36□□□□□ -0.75
CCS-206ENST00000530961 SMKR1H3BMG3 65 aa10.35□□□□□ -0.75
CCS-206ENST00000530961 VCYO14598 125 aa10.35□□□□□ -0.75
CCS-206ENST00000530961 PHOX2AO14813 284 aa10.35□□□□□ -0.75
CCS-206ENST00000530961 IGHV3-30P01768 117 aa10.35□□□□□ -0.75
CCS-206ENST00000530961 IGHV3-33P01772 117 aa10.35□□□□□ -0.75
CCS-206ENST00000530961 IGHV3-30-3P0DP02 117 aa10.35□□□□□ -0.75
CCS-206ENST00000530961 IGHV3-30-5P0DP03 117 aa10.35□□□□□ -0.75
CCS-206ENST00000530961 PMCHP20382 165 aa10.35□□□□□ -0.75
CCS-206ENST00000530961 POLR2KP53803 58 aaKnown RBP10.35□□□□□ -0.75
CCS-206ENST00000530961 SUMO2P61956 95 aaKnown RBP10.35□□□□□ -0.75
CCS-206ENST00000530961 LINC00336Q6ZUF6 198 aa10.35□□□□□ -0.75
CCS-206ENST00000530961 ORMDL3Q8N138 153 aa10.35□□□□□ -0.75
CCS-206ENST00000530961 TRBV27A0A0K0K1C4 114 aa10.34□□□□□ -0.75
CCS-206ENST00000530961 IBA57-AS1B1ANH7 110 aa10.34□□□□□ -0.75
CCS-206ENST00000530961 D6R8Y8 96 aa10.34□□□□□ -0.75
CCS-206ENST00000530961 ELOBQ15370 118 aa10.34□□□□□ -0.75
CCS-206ENST00000530961 COX19Q49B96 90 aa10.34□□□□□ -0.75
CCS-206ENST00000530961 TMEM136Q6ZRR5 245 aa10.34□□□□□ -0.75
CCS-206ENST00000530961 NFE4Q86UQ8 179 aa10.34□□□□□ -0.75
CCS-206ENST00000530961 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
CCS-206ENST00000530961 RTL8CO15255 209 aa10.33□□□□□ -0.76
CCS-206ENST00000530961 TNFRSF6BO95407 300 aa10.33□□□□□ -0.76
CCS-206ENST00000530961 AMTP48728 403 aa10.33□□□□□ -0.76
CCS-206ENST00000530961 RPL32P62910 135 aaKnown RBP10.33□□□□□ -0.76
CCS-206ENST00000530961 LAGE3Q14657 143 aa10.33□□□□□ -0.76
CCS-206ENST00000530961 LAMTOR2Q9Y2Q5 125 aa10.33□□□□□ -0.76
CCS-206ENST00000530961 GNB1LQ9BYB4 327 aa10.32□□□□□ -0.76
CCS-206ENST00000530961 H7C423 109 aa10.31□□□□□ -0.76
CCS-206ENST00000530961 UBE2L6O14933 153 aa10.31□□□□□ -0.76
CCS-206ENST00000530961 HLA-DQA1P01909 254 aa10.31□□□□□ -0.76
CCS-206ENST00000530961 APCSP02743 223 aa10.31□□□□□ -0.76
CCS-206ENST00000530961 GAGE6Q13070 117 aa10.31□□□□□ -0.76
CCS-206ENST00000530961 Q8N3U1 123 aa10.31□□□□□ -0.76
CCS-206ENST00000530961 PRELID3AQ96N28 172 aa10.31□□□□□ -0.76
CCS-206ENST00000530961 KIR2DL4Q99706 377 aa10.31□□□□□ -0.76
CCS-206ENST00000530961 TRAV8-3A0A0A6YYJ7 113 aa10.3□□□□□ -0.76
CCS-206ENST00000530961 A0A1B0GUV1 79 aa10.3□□□□□ -0.76
CCS-206ENST00000530961 TCAPO15273 167 aa10.3□□□□□ -0.76
CCS-206ENST00000530961 ATRAIDQ6UW56 229 aa10.3□□□□□ -0.76
CCS-206ENST00000530961 DEFB104AQ8WTQ1 72 aa10.3□□□□□ -0.76
CCS-206ENST00000530961 TSHBP01222 138 aa10.29□□□□□ -0.76
CCS-206ENST00000530961 NPYP01303 97 aa10.29□□□□□ -0.76
CCS-206ENST00000530961 MT-ND6P03923 174 aa10.29□□□□□ -0.76
CCS-206ENST00000530961 RBX1P62877 108 aa10.29□□□□□ -0.76
CCS-206ENST00000530961 MPV17L2Q567V2 206 aa10.29□□□□□ -0.76
CCS-206ENST00000530961 KLK12Q9UKR0 248 aa10.29□□□□□ -0.76
CCS-206ENST00000530961 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
CCS-206ENST00000530961 PRSS47A8MTI9 375 aa10.28□□□□□ -0.76
CCS-206ENST00000530961 ESDP10768 282 aa10.28□□□□□ -0.76
CCS-206ENST00000530961 FCER1GP30273 86 aa10.28□□□□□ -0.76
CCS-206ENST00000530961 Q0VG73 95 aa10.28□□□□□ -0.76
CCS-206ENST00000530961 DNAH2Q9P225 4427 aa10.28□□□□□ -0.76
CCS-206ENST00000530961 DNAH10Q8IVF4 4471 aa10.28□□□□□ -0.76
CCS-206ENST00000530961 ANGP03950 147 aaKnown RBP10.27□□□□□ -0.77
CCS-206ENST00000530961 Q6ZRN7 208 aaPredicted RBP10.27□□□□□ -0.77
CCS-206ENST00000530961 Q8N976 141 aa10.27□□□□□ -0.77
CCS-206ENST00000530961 SMIM2Q9BVW6 85 aa10.27□□□□□ -0.77
CCS-206ENST00000530961 TM2D2Q9BX73 214 aa10.27□□□□□ -0.77
CCS-206ENST00000530961 SMCO4Q9NRQ5 59 aa10.27□□□□□ -0.77
CCS-206ENST00000530961 TGIF2-C20orf24A0A0A6YYL0 155 aa10.26□□□□□ -0.77
CCS-206ENST00000530961 UBE2WQ96B02 151 aa10.26□□□□□ -0.77
CCS-206ENST00000530961 RMI2Q96E14 147 aa10.26□□□□□ -0.77
CCS-206ENST00000530961 MAP1LC3AQ9H492 121 aa10.26□□□□□ -0.77
CCS-206ENST00000530961 Q9HAA7 133 aa10.26□□□□□ -0.77
CCS-206ENST00000530961 COX11Q9Y6N1 276 aa10.26□□□□□ -0.77
CCS-206ENST00000530961 CRPP02741 224 aa10.25□□□□□ -0.77
CCS-206ENST00000530961 ZNF25P17030 456 aaPredicted RBP10.25□□□□□ -0.77
CCS-206ENST00000530961 AMMECR1LQ6DCA0 310 aa10.25□□□□□ -0.77
CCS-206ENST00000530961 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.24□□□□□ -0.77
CCS-206ENST00000530961 IGKV2-29A2NJV5 120 aaPredicted RBP10.24□□□□□ -0.77
CCS-206ENST00000530961 FGF6P10767 208 aa10.24□□□□□ -0.77
CCS-206ENST00000530961 RAB5AP20339 215 aa10.24□□□□□ -0.77
CCS-206ENST00000530961 SMAGPQ0VAQ4 97 aa10.24□□□□□ -0.77
CCS-206ENST00000530961 TMEM18Q96B42 140 aa10.24□□□□□ -0.77
CCS-206ENST00000530961 PRR34Q9NV39 138 aa10.24□□□□□ -0.77
CCS-206ENST00000530961 IGLV4-60A0A075B6I1 120 aa10.23□□□□□ -0.77
CCS-206ENST00000530961 PSCAO43653 123 aa10.23□□□□□ -0.77
CCS-206ENST00000530961 TNP2Q05952 138 aa10.23□□□□□ -0.77
CCS-206ENST00000530961 FABP9Q0Z7S8 132 aa10.23□□□□□ -0.77
CCS-206ENST00000530961 MIAQ16674 131 aa10.23□□□□□ -0.77
CCS-206ENST00000530961 KIAA1644Q3SXP7 199 aa10.23□□□□□ -0.77
CCS-206ENST00000530961 RNASEKQ6P5S7 137 aaKnown RBP10.23□□□□□ -0.77
CCS-206ENST00000530961 ENHOQ6UWT2 76 aa10.23□□□□□ -0.77
CCS-206ENST00000530961 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
CCS-206ENST00000530961 C20orf203Q8NBC4 194 aa10.23□□□□□ -0.77
CCS-206ENST00000530961 YPEL4Q96NS1 127 aa10.23□□□□□ -0.77
CCS-206ENST00000530961 MRPL18Q9H0U6 180 aaKnown RBP10.23□□□□□ -0.77
CCS-206ENST00000530961 LOC389332A0A1B0GUA5 103 aa10.22□□□□□ -0.77
CCS-206ENST00000530961 K7EMI3 77 aa10.22□□□□□ -0.77
CCS-206ENST00000530961 MRPL52Q86TS9 123 aaKnown RBP10.22□□□□□ -0.77
CCS-206ENST00000530961 Q8N8P6 123 aa10.22□□□□□ -0.77
CCS-206ENST00000530961 TMEM101Q96IK0 257 aa10.22□□□□□ -0.77
CCS-206ENST00000530961 NXT2Q9NPJ8 142 aaKnown RBP10.22□□□□□ -0.77
CCS-206ENST00000530961 TRAPPC1Q9Y5R8 145 aa10.22□□□□□ -0.77
CCS-206ENST00000530961 DNAH17Q9UFH2 4485 aa10.21□□□□□ -0.77
CCS-206ENST00000530961 REG3AQ06141 175 aa10.21□□□□□ -0.77
CCS-206ENST00000530961 CBLN2Q8IUK8 224 aa10.21□□□□□ -0.77
CCS-206ENST00000530961 ALKBH7Q9BT30 221 aaPredicted RBP10.21□□□□□ -0.77
CCS-206ENST00000530961 CSDC2Q9Y534 153 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms