RNA–Protein interactions for RNA: ENST00000529759.1

LDLRAD3-204, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-204ENST00000529759 IGLV4-60A0A075B6I1 120 aa6.8□□□□□ -1.32
LDLRAD3-204ENST00000529759 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.8□□□□□ -1.32
LDLRAD3-204ENST00000529759 RAB19A4D1S5 217 aa6.8□□□□□ -1.32
LDLRAD3-204ENST00000529759 CTRLP40313 264 aa6.8□□□□□ -1.32
LDLRAD3-204ENST00000529759 EIF5AL1Q6IS14 154 aaKnown RBP6.8□□□□□ -1.32
LDLRAD3-204ENST00000529759 LYZL1Q6UWQ5 148 aa6.8□□□□□ -1.32
LDLRAD3-204ENST00000529759 GFRA4Q9GZZ7 299 aa6.8□□□□□ -1.32
LDLRAD3-204ENST00000529759 NIT2Q9NQR4 276 aa6.8□□□□□ -1.32
LDLRAD3-204ENST00000529759 BIN3Q9NQY0 253 aa6.8□□□□□ -1.32
LDLRAD3-204ENST00000529759 IGHV3-64A0A075B6Q5 118 aa6.79□□□□□ -1.32
LDLRAD3-204ENST00000529759 UBE2L6O14933 153 aa6.79□□□□□ -1.32
LDLRAD3-204ENST00000529759 IFNA1P01562 189 aa6.79□□□□□ -1.32
LDLRAD3-204ENST00000529759 NTF3P20783 257 aa6.79□□□□□ -1.32
LDLRAD3-204ENST00000529759 AMTP48728 403 aa6.79□□□□□ -1.32
LDLRAD3-204ENST00000529759 COTL1Q14019 142 aa6.79□□□□□ -1.32
LDLRAD3-204ENST00000529759 WDR73Q6P4I2 378 aa6.79□□□□□ -1.32
LDLRAD3-204ENST00000529759 RNF185Q96GF1 192 aa6.79□□□□□ -1.32
LDLRAD3-204ENST00000529759 AP5S1Q9NUS5 200 aa6.79□□□□□ -1.32
LDLRAD3-204ENST00000529759 BCL2P10415 239 aa6.78□□□□□ -1.32
LDLRAD3-204ENST00000529759 SULT1A2P50226 295 aa6.78□□□□□ -1.32
LDLRAD3-204ENST00000529759 C9orf62Q8N4C0 152 aa6.78□□□□□ -1.32
LDLRAD3-204ENST00000529759 SPACA4Q8TDM5 124 aa6.78□□□□□ -1.32
LDLRAD3-204ENST00000529759 CNFNQ9BYD5 112 aa6.78□□□□□ -1.32
LDLRAD3-204ENST00000529759 SLPIP03973 132 aa6.77□□□□□ -1.33
LDLRAD3-204ENST00000529759 Q6ZRU5 148 aa6.77□□□□□ -1.33
LDLRAD3-204ENST00000529759 MED9Q9NWA0 146 aa6.77□□□□□ -1.33
LDLRAD3-204ENST00000529759 A0A087WYN8 130 aa6.76□□□□□ -1.33
LDLRAD3-204ENST00000529759 CHTF8P0CG12 524 aa6.76□□□□□ -1.33
LDLRAD3-204ENST00000529759 TWIST1Q15672 202 aa6.76□□□□□ -1.33
LDLRAD3-204ENST00000529759 C15orf56Q8N910 161 aa6.76□□□□□ -1.33
LDLRAD3-204ENST00000529759 NUDT10Q8NFP7 164 aa6.76□□□□□ -1.33
LDLRAD3-204ENST00000529759 NUDT11Q96G61 164 aa6.76□□□□□ -1.33
LDLRAD3-204ENST00000529759 RPP21Q9H633 154 aaKnown RBP6.76□□□□□ -1.33
LDLRAD3-204ENST00000529759 LPAP08519 4548 aa6.75□□□□□ -1.33
LDLRAD3-204ENST00000529759 TRAV26-2A0A0B4J265 109 aa6.75□□□□□ -1.33
LDLRAD3-204ENST00000529759 GAGE12HA6NDE8 117 aa6.75□□□□□ -1.33
LDLRAD3-204ENST00000529759 TAGLN2P37802 199 aaKnown RBP6.75□□□□□ -1.33
LDLRAD3-204ENST00000529759 CFAP161Q6P656 301 aa6.75□□□□□ -1.33
LDLRAD3-204ENST00000529759 GATD1Q8NB37 220 aa6.75□□□□□ -1.33
LDLRAD3-204ENST00000529759 PLAC8Q9NZF1 115 aa6.75□□□□□ -1.33
LDLRAD3-204ENST00000529759 K7EN84 100 aa6.74□□□□□ -1.33
LDLRAD3-204ENST00000529759 NCR2O95944 276 aa6.74□□□□□ -1.33
LDLRAD3-204ENST00000529759 AMMECR1LQ6DCA0 310 aa6.74□□□□□ -1.33
LDLRAD3-204ENST00000529759 DPH3Q96FX2 82 aa6.74□□□□□ -1.33
LDLRAD3-204ENST00000529759 RNASE7Q9H1E1 156 aaKnown RBP6.74□□□□□ -1.33
LDLRAD3-204ENST00000529759 GVQW2A0A096LPI5 108 aaPredicted RBP6.73□□□□□ -1.33
LDLRAD3-204ENST00000529759 IGKV3OR2-268A0A0C4DH90 116 aa6.73□□□□□ -1.33
LDLRAD3-204ENST00000529759 H7C423 109 aa6.73□□□□□ -1.33
LDLRAD3-204ENST00000529759 APCSP02743 223 aa6.73□□□□□ -1.33
LDLRAD3-204ENST00000529759 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
LDLRAD3-204ENST00000529759 Q6ZNX1 250 aa6.73□□□□□ -1.33
LDLRAD3-204ENST00000529759 SLC51BQ86UW2 128 aa6.73□□□□□ -1.33
LDLRAD3-204ENST00000529759 C7orf33Q8WU49 177 aa6.73□□□□□ -1.33
LDLRAD3-204ENST00000529759 CHCHD10Q8WYQ3 142 aaPredicted RBP6.73□□□□□ -1.33
LDLRAD3-204ENST00000529759 RPL39LQ96EH5 51 aaKnown RBP6.73□□□□□ -1.33
LDLRAD3-204ENST00000529759 PHOX2AO14813 284 aa6.72□□□□□ -1.33
LDLRAD3-204ENST00000529759 NDUFS6O75380 124 aaKnown RBP6.72□□□□□ -1.33
LDLRAD3-204ENST00000529759 COX6A2Q02221 97 aa6.72□□□□□ -1.33
LDLRAD3-204ENST00000529759 HIGD2BQ4VC39 106 aa6.72□□□□□ -1.33
LDLRAD3-204ENST00000529759 TEX261Q6UWH6 196 aa6.72□□□□□ -1.33
LDLRAD3-204ENST00000529759 SMIM15Q7Z3B0 74 aa6.72□□□□□ -1.33
LDLRAD3-204ENST00000529759 TCTE3Q8IZS6 198 aa6.72□□□□□ -1.33
LDLRAD3-204ENST00000529759 GTSF1Q8WW33 167 aa6.72□□□□□ -1.33
LDLRAD3-204ENST00000529759 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.71□□□□□ -1.34
LDLRAD3-204ENST00000529759 IGKV2-29A2NJV5 120 aaPredicted RBP6.71□□□□□ -1.34
LDLRAD3-204ENST00000529759 SDHAF1A6NFY7 115 aa6.71□□□□□ -1.34
LDLRAD3-204ENST00000529759 FGF6P10767 208 aa6.71□□□□□ -1.34
LDLRAD3-204ENST00000529759 ZNF25P17030 456 aaPredicted RBP6.71□□□□□ -1.34
LDLRAD3-204ENST00000529759 RNASEKQ6P5S7 137 aaKnown RBP6.71□□□□□ -1.34
LDLRAD3-204ENST00000529759 OCC1Q8TAD7 63 aa6.71□□□□□ -1.34
LDLRAD3-204ENST00000529759 IGKV2-24A0A0C4DH68 120 aa6.7□□□□□ -1.34
LDLRAD3-204ENST00000529759 FOXI1Q12951 378 aa6.7□□□□□ -1.34
LDLRAD3-204ENST00000529759 MAJINQ3KP22 176 aa6.7□□□□□ -1.34
LDLRAD3-204ENST00000529759 OR5A1Q8NGJ0 315 aa6.7□□□□□ -1.34
LDLRAD3-204ENST00000529759 PRSS3P2Q8NHM4 247 aa6.7□□□□□ -1.34
LDLRAD3-204ENST00000529759 TRBV6-5A0A0K0K1A5 114 aa6.69□□□□□ -1.34
LDLRAD3-204ENST00000529759 TMEM250H0YL14 139 aa6.69□□□□□ -1.34
LDLRAD3-204ENST00000529759 I3L3M4 83 aa6.69□□□□□ -1.34
LDLRAD3-204ENST00000529759 GATCO43716 136 aaKnown RBP6.69□□□□□ -1.34
LDLRAD3-204ENST00000529759 FOXA3P55318 350 aaPredicted RBP6.69□□□□□ -1.34
LDLRAD3-204ENST00000529759 PRR3P79522 188 aaKnown RBP6.69□□□□□ -1.34
LDLRAD3-204ENST00000529759 FAM231DQ6ZW35 169 aa6.69□□□□□ -1.34
LDLRAD3-204ENST00000529759 BTF3L4Q96K17 158 aa6.69□□□□□ -1.34
LDLRAD3-204ENST00000529759 PKIGQ9Y2B9 76 aa6.69□□□□□ -1.34
LDLRAD3-204ENST00000529759 A0A096LNI7 61 aa6.68□□□□□ -1.34
LDLRAD3-204ENST00000529759 A8MWL6 223 aa6.68□□□□□ -1.34
LDLRAD3-204ENST00000529759 GAS8-AS1O95177 125 aa6.68□□□□□ -1.34
LDLRAD3-204ENST00000529759 XCL1P47992 114 aa6.68□□□□□ -1.34
LDLRAD3-204ENST00000529759 CT83Q5H943 113 aa6.68□□□□□ -1.34
LDLRAD3-204ENST00000529759 STPG4Q8N801 248 aa6.68□□□□□ -1.34
LDLRAD3-204ENST00000529759 TMEM101Q96IK0 257 aa6.68□□□□□ -1.34
LDLRAD3-204ENST00000529759 FAM210AQ96ND0 272 aa6.68□□□□□ -1.34
LDLRAD3-204ENST00000529759 LINC00474Q9P2X8 69 aa6.68□□□□□ -1.34
LDLRAD3-204ENST00000529759 IGHV1-58A0A0C4DH39 117 aa6.67□□□□□ -1.34
LDLRAD3-204ENST00000529759 LINC00959A0A1B0GUT2 108 aa6.67□□□□□ -1.34
LDLRAD3-204ENST00000529759 FAM231BA6NCW3 169 aa6.67□□□□□ -1.34
LDLRAD3-204ENST00000529759 CCL25O15444 150 aa6.67□□□□□ -1.34
LDLRAD3-204ENST00000529759 TSHBP01222 138 aa6.67□□□□□ -1.34
LDLRAD3-204ENST00000529759 ESDP10768 282 aa6.67□□□□□ -1.34
LDLRAD3-204ENST00000529759 PMCHP20382 165 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms