RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 SMIM7Q9BQ49 75 aa10.1□□□□□ -0.79
CTSB-215ENST00000528965 ZNF727A8MUV8 499 aa10.09□□□□□ -0.79
CTSB-215ENST00000528965 A8MWL6 223 aa10.09□□□□□ -0.79
CTSB-215ENST00000528965 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
CTSB-215ENST00000528965 FAM210AQ96ND0 272 aa10.09□□□□□ -0.79
CTSB-215ENST00000528965 DPH3P1Q9H4G8 78 aa10.09□□□□□ -0.79
CTSB-215ENST00000528965 KIF25-AS1Q9Y6Z4 181 aa10.09□□□□□ -0.79
CTSB-215ENST00000528965 REG3AQ06141 175 aa10.08□□□□□ -0.8
CTSB-215ENST00000528965 WDR73Q6P4I2 378 aa10.08□□□□□ -0.8
CTSB-215ENST00000528965 TRAV8-4A0A0B4J246 113 aa10.07□□□□□ -0.8
CTSB-215ENST00000528965 K7EN84 100 aa10.07□□□□□ -0.8
CTSB-215ENST00000528965 M0QY20 66 aa10.07□□□□□ -0.8
CTSB-215ENST00000528965 TMEM243Q9BU79 118 aa10.07□□□□□ -0.8
CTSB-215ENST00000528965 AP5S1Q9NUS5 200 aa10.07□□□□□ -0.8
CTSB-215ENST00000528965 PLA2G2DQ9UNK4 145 aa10.07□□□□□ -0.8
CTSB-215ENST00000528965 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
CTSB-215ENST00000528965 CNBPP62633 177 aaKnown RBP10.06□□□□□ -0.8
CTSB-215ENST00000528965 PEA15Q15121 130 aa10.06□□□□□ -0.8
CTSB-215ENST00000528965 SUMO4Q6EEV6 95 aa10.06□□□□□ -0.8
CTSB-215ENST00000528965 RASL11AQ6T310 242 aa10.06□□□□□ -0.8
CTSB-215ENST00000528965 IGLV10-54A0A075B6I4 117 aa10.05□□□□□ -0.8
CTSB-215ENST00000528965 hDV102S1A0JD36 115 aa10.05□□□□□ -0.8
CTSB-215ENST00000528965 UBE2L6O14933 153 aa10.05□□□□□ -0.8
CTSB-215ENST00000528965 KRTAP26-1Q6PEX3 210 aa10.05□□□□□ -0.8
CTSB-215ENST00000528965 FAM231DQ6ZW35 169 aa10.05□□□□□ -0.8
CTSB-215ENST00000528965 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
CTSB-215ENST00000528965 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.05□□□□□ -0.8
CTSB-215ENST00000528965 A0A1B0GUV1 79 aa10.04□□□□□ -0.8
CTSB-215ENST00000528965 SRP19P09132 144 aaKnown RBP10.04□□□□□ -0.8
CTSB-215ENST00000528965 CTRLP40313 264 aa10.04□□□□□ -0.8
CTSB-215ENST00000528965 TMEM241Q24JQ0 296 aa10.04□□□□□ -0.8
CTSB-215ENST00000528965 NIT2Q9NQR4 276 aa10.04□□□□□ -0.8
CTSB-215ENST00000528965 IGHV3-64A0A075B6Q5 118 aa10.03□□□□□ -0.8
CTSB-215ENST00000528965 NDUFS6O75380 124 aaKnown RBP10.03□□□□□ -0.8
CTSB-215ENST00000528965 FAM74A3Q4VXF1 159 aa10.03□□□□□ -0.8
CTSB-215ENST00000528965 TEX261Q6UWH6 196 aa10.03□□□□□ -0.8
CTSB-215ENST00000528965 SDIM1Q6ZPB5 146 aa10.03□□□□□ -0.8
CTSB-215ENST00000528965 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.81
CTSB-215ENST00000528965 RNF185Q96GF1 192 aa10.02□□□□□ -0.81
CTSB-215ENST00000528965 LRP1Q07954 4544 aaKnown RBP10.01□□□□□ -0.81
CTSB-215ENST00000528965 AMTP48728 403 aa10.01□□□□□ -0.81
CTSB-215ENST00000528965 CIRBPQ14011 172 aaKnown RBP10.01□□□□□ -0.81
CTSB-215ENST00000528965 COTL1Q14019 142 aa10.01□□□□□ -0.81
CTSB-215ENST00000528965 LINC01551Q86U37 167 aa10.01□□□□□ -0.81
CTSB-215ENST00000528965 DPH3Q96FX2 82 aa10.01□□□□□ -0.81
CTSB-215ENST00000528965 HNRNPA3P51991 378 aaKnown RBP10□□□□□ -0.81
CTSB-215ENST00000528965 RAB14P61106 215 aa10□□□□□ -0.81
CTSB-215ENST00000528965 ADIRFQ15847 76 aa10□□□□□ -0.81
CTSB-215ENST00000528965 CT83Q5H943 113 aa10□□□□□ -0.81
CTSB-215ENST00000528965 TSKUQ8WUA8 353 aa10□□□□□ -0.81
CTSB-215ENST00000528965 GTSF1Q8WW33 167 aa10□□□□□ -0.81
CTSB-215ENST00000528965 OSTCQ9NRP0 149 aa10□□□□□ -0.81
CTSB-215ENST00000528965 UBR4Q5T4S7 5183 aa10□□□□□ -0.81
CTSB-215ENST00000528965 IGLV4-60A0A075B6I1 120 aa9.99□□□□□ -0.81
CTSB-215ENST00000528965 A0A1B0GUT8 65 aa9.99□□□□□ -0.81
CTSB-215ENST00000528965 PANO1I0J062 215 aa9.99□□□□□ -0.81
CTSB-215ENST00000528965 CFAP161Q6P656 301 aa9.99□□□□□ -0.81
CTSB-215ENST00000528965 Q6ZRU5 148 aa9.99□□□□□ -0.81
CTSB-215ENST00000528965 CNFNQ9BYD5 112 aa9.99□□□□□ -0.81
CTSB-215ENST00000528965 NAT8Q9UHE5 227 aa9.99□□□□□ -0.81
CTSB-215ENST00000528965 HIGD1CA8MV81 97 aa9.98□□□□□ -0.81
CTSB-215ENST00000528965 GFRA4Q9GZZ7 299 aa9.98□□□□□ -0.81
CTSB-215ENST00000528965 SMDT1Q9H4I9 107 aa9.98□□□□□ -0.81
CTSB-215ENST00000528965 HMCN2Q8NDA2 5059 aa9.98□□□□□ -0.81
CTSB-215ENST00000528965 TRAV26-2A0A0B4J265 109 aa9.97□□□□□ -0.81
CTSB-215ENST00000528965 FAM231BA6NCW3 169 aa9.97□□□□□ -0.81
CTSB-215ENST00000528965 RIGQ13278 110 aa9.97□□□□□ -0.81
CTSB-215ENST00000528965 GATD1Q8NB37 220 aa9.97□□□□□ -0.81
CTSB-215ENST00000528965 SPACA4Q8TDM5 124 aa9.97□□□□□ -0.81
CTSB-215ENST00000528965 FAT3Q8TDW7 4589 aa9.97□□□□□ -0.81
CTSB-215ENST00000528965 PKHD1L1Q86WI1 4243 aa9.97□□□□□ -0.81
CTSB-215ENST00000528965 PMCHP20382 165 aa9.96□□□□□ -0.82
CTSB-215ENST00000528965 FOXA3P55318 350 aaPredicted RBP9.96□□□□□ -0.82
CTSB-215ENST00000528965 AMMECR1LQ6DCA0 310 aa9.96□□□□□ -0.82
CTSB-215ENST00000528965 C7orf33Q8WU49 177 aa9.96□□□□□ -0.82
CTSB-215ENST00000528965 A0A087WYN8 130 aa9.95□□□□□ -0.82
CTSB-215ENST00000528965 RPL23P62829 140 aaKnown RBP9.95□□□□□ -0.82
CTSB-215ENST00000528965 ISOC2Q96AB3 205 aa9.95□□□□□ -0.82
CTSB-215ENST00000528965 NAT8BQ9UHF3 227 aa9.95□□□□□ -0.82
CTSB-215ENST00000528965 GAGE12HA6NDE8 117 aa9.94□□□□□ -0.82
CTSB-215ENST00000528965 NCR2O95944 276 aa9.94□□□□□ -0.82
CTSB-215ENST00000528965 CHTF8P0CG12 524 aa9.94□□□□□ -0.82
CTSB-215ENST00000528965 RPL39LQ96EH5 51 aaKnown RBP9.94□□□□□ -0.82
CTSB-215ENST00000528965 ST20Q9HBF5 79 aa9.94□□□□□ -0.82
CTSB-215ENST00000528965 IGKV3OR2-268A0A0C4DH90 116 aa9.93□□□□□ -0.82
CTSB-215ENST00000528965 APCSP02743 223 aa9.93□□□□□ -0.82
CTSB-215ENST00000528965 RPS10P46783 165 aaKnown RBP9.93□□□□□ -0.82
CTSB-215ENST00000528965 C15orf56Q8N910 161 aa9.93□□□□□ -0.82
CTSB-215ENST00000528965 TMEM191AQ9H0A3 160 aa9.93□□□□□ -0.82
CTSB-215ENST00000528965 PLAC8Q9NZF1 115 aa9.93□□□□□ -0.82
CTSB-215ENST00000528965 PKIGQ9Y2B9 76 aa9.93□□□□□ -0.82
CTSB-215ENST00000528965 SDHAF1A6NFY7 115 aa9.92□□□□□ -0.82
CTSB-215ENST00000528965 H7C423 109 aa9.92□□□□□ -0.82
CTSB-215ENST00000528965 SLPIP03973 132 aa9.92□□□□□ -0.82
CTSB-215ENST00000528965 SRSF3P84103 164 aaKnown RBP9.92□□□□□ -0.82
CTSB-215ENST00000528965 RNASEKQ6P5S7 137 aaKnown RBP9.92□□□□□ -0.82
CTSB-215ENST00000528965 V9GYV3 84 aa9.92□□□□□ -0.82
CTSB-215ENST00000528965 C9JQL5 133 aa9.91□□□□□ -0.82
CTSB-215ENST00000528965 I3L3M4 83 aa9.91□□□□□ -0.82
CTSB-215ENST00000528965 NUP35Q8NFH5 326 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms