RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 C11orf21Q9P2W6 132 aa5.83□□□□□ -1.48
SSBP3-212ENST00000528930 LRP1Q07954 4544 aaKnown RBP5.83□□□□□ -1.48
SSBP3-212ENST00000528930 A0A096LPF7 62 aa5.82□□□□□ -1.48
SSBP3-212ENST00000528930 K7EQM0 130 aa5.82□□□□□ -1.48
SSBP3-212ENST00000528930 CCL18P55774 89 aa5.82□□□□□ -1.48
SSBP3-212ENST00000528930 ESRGQ1W209 222 aa5.82□□□□□ -1.48
SSBP3-212ENST00000528930 Q6ZN92 141 aa5.82□□□□□ -1.48
SSBP3-212ENST00000528930 PRNTQ86SH4 94 aa5.82□□□□□ -1.48
SSBP3-212ENST00000528930 KCNS1Q96KK3 526 aa5.82□□□□□ -1.48
SSBP3-212ENST00000528930 PMCHL2Q9BQD1 86 aa5.82□□□□□ -1.48
SSBP3-212ENST00000528930 SPXQ9BT56 116 aa5.82□□□□□ -1.48
SSBP3-212ENST00000528930 NDFIP1Q9BT67 221 aa5.82□□□□□ -1.48
SSBP3-212ENST00000528930 PAM16Q9Y3D7 125 aa5.82□□□□□ -1.48
SSBP3-212ENST00000528930 TRAV34A0A0B4J273 112 aa5.81□□□□□ -1.48
SSBP3-212ENST00000528930 FBLL1A6NHQ2 334 aaKnown RBP5.81□□□□□ -1.48
SSBP3-212ENST00000528930 PEX7O00628 323 aa5.81□□□□□ -1.48
SSBP3-212ENST00000528930 IGHV3-53P01767 116 aa5.81□□□□□ -1.48
SSBP3-212ENST00000528930 SCGB1A1P11684 91 aa5.81□□□□□ -1.48
SSBP3-212ENST00000528930 PMCHP20382 165 aa5.81□□□□□ -1.48
SSBP3-212ENST00000528930 C21orf62-AS1Q17RA5 79 aa5.81□□□□□ -1.48
SSBP3-212ENST00000528930 OCIAD2Q56VL3 154 aa5.81□□□□□ -1.48
SSBP3-212ENST00000528930 MRPL54Q6P161 138 aaKnown RBP5.81□□□□□ -1.48
SSBP3-212ENST00000528930 OR4C5Q8NGB2 326 aa5.81□□□□□ -1.48
SSBP3-212ENST00000528930 BORCS7Q96B45 105 aa5.81□□□□□ -1.48
SSBP3-212ENST00000528930 ZNF479Q96JC4 524 aa5.81□□□□□ -1.48
SSBP3-212ENST00000528930 NBDYA0A0U1RRE5 68 aa5.8□□□□□ -1.48
SSBP3-212ENST00000528930 M0R2P5 195 aa5.8□□□□□ -1.48
SSBP3-212ENST00000528930 OR5AL1P0C617 328 aa5.8□□□□□ -1.48
SSBP3-212ENST00000528930 CRYBA4P53673 196 aa5.8□□□□□ -1.48
SSBP3-212ENST00000528930 TMEM136Q6ZRR5 245 aa5.8□□□□□ -1.48
SSBP3-212ENST00000528930 FAM231DQ6ZW35 169 aa5.8□□□□□ -1.48
SSBP3-212ENST00000528930 NIT1Q86X76 327 aa5.8□□□□□ -1.48
SSBP3-212ENST00000528930 OCC1Q8TAD7 63 aa5.8□□□□□ -1.48
SSBP3-212ENST00000528930 UPK3BQ9BT76 320 aa5.8□□□□□ -1.48
SSBP3-212ENST00000528930 PRO0255Q9UI72 69 aa5.8□□□□□ -1.48
SSBP3-212ENST00000528930 HHLA3Q9XRX5 114 aa5.8□□□□□ -1.48
SSBP3-212ENST00000528930 TRAV4A0A0B4J268 109 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 IGKV3D-20A0A0C4DH25 116 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 SMIM27A0A1W2PRY6 76 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 C3orf79P0CE67 100 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 SMIM17P0DL12 118 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 RNASE3P12724 160 aaKnown RBP5.79□□□□□ -1.48
SSBP3-212ENST00000528930 AMTP48728 403 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 CRIP1P50238 77 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 SLAQ13239 276 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 COX8CQ7Z4L0 72 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 ATP5L2Q7Z4Y8 100 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 Q86TA4 180 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 C9orf85Q96MD7 179 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 CST9LQ9H4G1 147 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 Q9H8V8 135 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 V9GYV3 84 aa5.79□□□□□ -1.48
SSBP3-212ENST00000528930 TRGV4A0A0C4DH28 118 aa5.78□□□□□ -1.48
SSBP3-212ENST00000528930 TRBV6-1A0A0K0K1D8 114 aa5.78□□□□□ -1.48
SSBP3-212ENST00000528930 FABP5P3A8MUU1 101 aa5.78□□□□□ -1.48
SSBP3-212ENST00000528930 KRTDAPP60985 99 aa5.78□□□□□ -1.48
SSBP3-212ENST00000528930 ZC2HC1AQ96GY0 325 aa5.78□□□□□ -1.48
SSBP3-212ENST00000528930 KRTAP1-5Q9BYS1 174 aa5.78□□□□□ -1.48
SSBP3-212ENST00000528930 ICOSQ9Y6W8 199 aa5.78□□□□□ -1.48
SSBP3-212ENST00000528930 TRBV20OR9-2A0A075B6H5 130 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 PGPEP1LA6NFU8 196 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 TMEM238C9JI98 176 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 K7EQD1 137 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 RS1O15537 224 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 SMR3BP02814 79 aaPredicted RBP5.77□□□□□ -1.49
SSBP3-212ENST00000528930 ASIPP42127 132 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 SEC11AP67812 179 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 BATFQ16520 125 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 MRPL23Q16540 153 aaKnown RBP5.77□□□□□ -1.49
SSBP3-212ENST00000528930 ZNF876PQ49A33 203 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 PRR27Q6MZM9 219 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 LYPD5Q6UWN5 251 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 TSKUQ8WUA8 353 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 PTH2Q96A98 100 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 CHCHD1Q96BP2 118 aaKnown RBP5.77□□□□□ -1.49
SSBP3-212ENST00000528930 NUDT11Q96G61 164 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 FMC1Q96HJ9 113 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 NAT8BQ9UHF3 227 aa5.77□□□□□ -1.49
SSBP3-212ENST00000528930 GRIFINA4D1Z8 144 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 TAX1BP3O14907 124 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 SH2D1AO60880 128 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 LTAP01374 205 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 APCSP02743 223 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 GYPEP15421 78 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 GATA1P15976 413 aaPredicted RBP5.76□□□□□ -1.49
SSBP3-212ENST00000528930 UBE2G1P62253 170 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 VAMP3Q15836 100 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 CFAP126Q5VTH2 177 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 NEGR1Q7Z3B1 354 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 C6orf223Q8N319 242 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 VPS25Q9BRG1 176 aa5.76□□□□□ -1.49
SSBP3-212ENST00000528930 FAT3Q8TDW7 4589 aa5.75□□□□□ -1.49
SSBP3-212ENST00000528930 LOC100131303A0A0U1RQF7 123 aa5.75□□□□□ -1.49
SSBP3-212ENST00000528930 FAM231BA6NCW3 169 aa5.75□□□□□ -1.49
SSBP3-212ENST00000528930 K7EN84 100 aa5.75□□□□□ -1.49
SSBP3-212ENST00000528930 SIVA1O15304 175 aa5.75□□□□□ -1.49
SSBP3-212ENST00000528930 ORM1P02763 201 aa5.75□□□□□ -1.49
SSBP3-212ENST00000528930 SLC25A34Q6PIV7 304 aa5.75□□□□□ -1.49
SSBP3-212ENST00000528930 GTF2H5Q6ZYL4 71 aa5.75□□□□□ -1.49
SSBP3-212ENST00000528930 NHLRC2Q8NBF2 726 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms