RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 DGAT2L7PQ6IED9 249 aa9.24□□□□□ -0.93
TSKU-203ENST00000527881 TRAV25A0A0B4J276 109 aa9.23□□□□□ -0.93
TSKU-203ENST00000527881 INAFM2P0DMQ5 153 aa9.23□□□□□ -0.93
TSKU-203ENST00000527881 DEFB124Q8NES8 71 aa9.23□□□□□ -0.93
TSKU-203ENST00000527881 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
TSKU-203ENST00000527881 RHPN1-AS1Q9BWJ2 59 aa9.23□□□□□ -0.93
TSKU-203ENST00000527881 DMXL1Q9Y485 3027 aa9.23□□□□□ -0.93
TSKU-203ENST00000527881 LRBAP50851 2863 aa9.23□□□□□ -0.93
TSKU-203ENST00000527881 HRCT1Q6UXD1 115 aa9.23□□□□□ -0.93
TSKU-203ENST00000527881 RNF152Q8N8N0 203 aa9.22□□□□□ -0.93
TSKU-203ENST00000527881 MINOS1-NBL1R4GNA1 71 aa9.22□□□□□ -0.93
TSKU-203ENST00000527881 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.22□□□□□ -0.93
TSKU-203ENST00000527881 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.22□□□□□ -0.93
TSKU-203ENST00000527881 IGKV2-29A2NJV5 120 aaPredicted RBP9.22□□□□□ -0.93
TSKU-203ENST00000527881 CRYGAP11844 174 aa9.22□□□□□ -0.93
TSKU-203ENST00000527881 Q9H8V8 135 aa9.22□□□□□ -0.93
TSKU-203ENST00000527881 IGHV3OR16-10A0A075B7F0 116 aa9.21□□□□□ -0.93
TSKU-203ENST00000527881 KNCNA6PVL3 124 aa9.21□□□□□ -0.93
TSKU-203ENST00000527881 MRPS36P82909 103 aaKnown RBP9.21□□□□□ -0.93
TSKU-203ENST00000527881 CITED2Q99967 270 aaPredicted RBP9.21□□□□□ -0.93
TSKU-203ENST00000527881 PTPRQQ9UMZ3 2332 aa9.21□□□□□ -0.94
TSKU-203ENST00000527881 SAA4P35542 130 aa9.21□□□□□ -0.94
TSKU-203ENST00000527881 CXCL5P42830 114 aa9.21□□□□□ -0.94
TSKU-203ENST00000527881 C4orf26Q17RF5 130 aa9.2□□□□□ -0.94
TSKU-203ENST00000527881 CYSTM1Q9H1C7 97 aa9.2□□□□□ -0.94
TSKU-203ENST00000527881 A0A087WVE0 104 aa9.2□□□□□ -0.94
TSKU-203ENST00000527881 F5H768 121 aa9.2□□□□□ -0.94
TSKU-203ENST00000527881 HIST1H4AP62805 103 aaKnown RBP9.2□□□□□ -0.94
TSKU-203ENST00000527881 SPINK13Q1W4C9 94 aa9.2□□□□□ -0.94
TSKU-203ENST00000527881 Q8N2B8 174 aa9.2□□□□□ -0.94
TSKU-203ENST00000527881 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
TSKU-203ENST00000527881 CDKN2A-AS1Q9UH64 79 aa9.2□□□□□ -0.94
TSKU-203ENST00000527881 RPL18AQ02543 176 aaKnown RBP9.19□□□□□ -0.94
TSKU-203ENST00000527881 IGHV3-16A0A0C4DH30 117 aa9.19□□□□□ -0.94
TSKU-203ENST00000527881 IGHV3-38A0A0C4DH36 116 aa9.19□□□□□ -0.94
TSKU-203ENST00000527881 SYNJ2BPP57105 145 aa9.19□□□□□ -0.94
TSKU-203ENST00000527881 C2CD3Q4AC94 2353 aa9.19□□□□□ -0.94
TSKU-203ENST00000527881 C5orf38Q86SI9 138 aa9.19□□□□□ -0.94
TSKU-203ENST00000527881 NOTCH3Q9UM47 2321 aa9.19□□□□□ -0.94
TSKU-203ENST00000527881 SOCS3O14543 225 aa9.18□□□□□ -0.94
TSKU-203ENST00000527881 PROK1P58294 105 aa9.18□□□□□ -0.94
TSKU-203ENST00000527881 RPS28P62857 69 aaKnown RBP9.18□□□□□ -0.94
TSKU-203ENST00000527881 DPH3Q96FX2 82 aa9.18□□□□□ -0.94
TSKU-203ENST00000527881 C14orf132Q9NPU4 83 aa9.18□□□□□ -0.94
TSKU-203ENST00000527881 KLLNB2CW77 178 aa9.18□□□□□ -0.94
TSKU-203ENST00000527881 NDUFA4O00483 81 aa9.18□□□□□ -0.94
TSKU-203ENST00000527881 TMEM258P61165 79 aa9.18□□□□□ -0.94
TSKU-203ENST00000527881 PRIMA1Q86XR5 153 aa9.18□□□□□ -0.94
TSKU-203ENST00000527881 C2orf48Q96LS8 159 aa9.18□□□□□ -0.94
TSKU-203ENST00000527881 TINCRA0A1B0GVN0 87 aa9.17□□□□□ -0.94
TSKU-203ENST00000527881 ANKRD11Q6UB99 2663 aaPredicted RBP9.17□□□□□ -0.94
TSKU-203ENST00000527881 IGHV1OR15-1A0A075B7D0 117 aa9.17□□□□□ -0.94
TSKU-203ENST00000527881 FAM223BA6NKX1 122 aa9.17□□□□□ -0.94
TSKU-203ENST00000527881 ZFP36P26651 326 aaKnown RBP9.17□□□□□ -0.94
TSKU-203ENST00000527881 FAM223AQ8IWN6 122 aa9.17□□□□□ -0.94
TSKU-203ENST00000527881 SERP2Q8N6R1 65 aa9.17□□□□□ -0.94
TSKU-203ENST00000527881 FAM19A4Q96LR4 140 aa9.17□□□□□ -0.94
TSKU-203ENST00000527881 IGFL3Q6UXB1 125 aa9.16□□□□□ -0.94
TSKU-203ENST00000527881 C10orf105Q8TEF2 133 aa9.16□□□□□ -0.94
TSKU-203ENST00000527881 MALP21145 153 aa9.16□□□□□ -0.94
TSKU-203ENST00000527881 LY6EQ16553 131 aa9.16□□□□□ -0.94
TSKU-203ENST00000527881 COPS9Q8WXC6 57 aa9.16□□□□□ -0.94
TSKU-203ENST00000527881 RIF1Q5UIP0 2472 aaKnown RBP9.16□□□□□ -0.94
TSKU-203ENST00000527881 FAM218AQ96MZ4 157 aa9.15□□□□□ -0.94
TSKU-203ENST00000527881 EDN2P20800 178 aa9.15□□□□□ -0.95
TSKU-203ENST00000527881 GRNP28799 593 aaKnown RBP9.15□□□□□ -0.95
TSKU-203ENST00000527881 C9orf85Q96MD7 179 aa9.15□□□□□ -0.95
TSKU-203ENST00000527881 PYGO1Q9Y3Y4 419 aa9.15□□□□□ -0.95
TSKU-203ENST00000527881 APRG1Q8IVJ8 170 aa9.14□□□□□ -0.95
TSKU-203ENST00000527881 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
TSKU-203ENST00000527881 NDUFA1O15239 70 aa9.14□□□□□ -0.95
TSKU-203ENST00000527881 TIMM17BO60830 172 aa9.14□□□□□ -0.95
TSKU-203ENST00000527881 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
TSKU-203ENST00000527881 C5orf56Q8N8D9 126 aa9.14□□□□□ -0.95
TSKU-203ENST00000527881 LAMA5O15230 3695 aa9.14□□□□□ -0.95
TSKU-203ENST00000527881 CRPP02741 224 aa9.13□□□□□ -0.95
TSKU-203ENST00000527881 PLA2G2CQ5R387 149 aa9.13□□□□□ -0.95
TSKU-203ENST00000527881 TLN1Q9Y490 2541 aaKnown RBP9.13□□□□□ -0.95
TSKU-203ENST00000527881 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
TSKU-203ENST00000527881 Q9UF83 564 aa9.12□□□□□ -0.95
TSKU-203ENST00000527881 ASH1LQ9NR48 2969 aaKnown RBP9.12□□□□□ -0.95
TSKU-203ENST00000527881 SNRPD3P62318 126 aaKnown RBP9.12□□□□□ -0.95
TSKU-203ENST00000527881 SOSTDC1Q6X4U4 206 aa9.12□□□□□ -0.95
TSKU-203ENST00000527881 DCHS2Q6V1P9 2916 aa9.11□□□□□ -0.95
TSKU-203ENST00000527881 WIPF1O43516 503 aa9.11□□□□□ -0.95
TSKU-203ENST00000527881 MOB4Q9Y3A3 225 aa9.11□□□□□ -0.95
TSKU-203ENST00000527881 SVEP1Q4LDE5 3571 aa9.11□□□□□ -0.95
TSKU-203ENST00000527881 LINC00846Q9NV44 126 aa9.11□□□□□ -0.95
TSKU-203ENST00000527881 UBE2D4Q9Y2X8 147 aa9.11□□□□□ -0.95
TSKU-203ENST00000527881 SIRPDQ9H106 197 aa9.1□□□□□ -0.95
TSKU-203ENST00000527881 OXTP01178 125 aa9.1□□□□□ -0.95
TSKU-203ENST00000527881 PRM2P04554 102 aa9.1□□□□□ -0.95
TSKU-203ENST00000527881 BRD3OSQ6XYD6 125 aa9.1□□□□□ -0.95
TSKU-203ENST00000527881 COX6A2Q02221 97 aa9.09□□□□□ -0.95
TSKU-203ENST00000527881 TOMM7Q9P0U1 55 aa9.09□□□□□ -0.95
TSKU-203ENST00000527881 FAM222AQ5U5X8 452 aa9.09□□□□□ -0.95
TSKU-203ENST00000527881 HIST2H2BCQ6DN03 193 aa9.09□□□□□ -0.95
TSKU-203ENST00000527881 HIST2H2BDQ6DRA6 164 aa9.09□□□□□ -0.95
TSKU-203ENST00000527881 FAM104AQ969W3 186 aa9.09□□□□□ -0.95
TSKU-203ENST00000527881 TRAV23DV6A0A075B6W5 121 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms