RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 ICE1Q9Y2F5 2266 aa5.56□□□□□ -1.52
SOX6-208ENST00000527619 A0A1W2PNU3 283 aaPredicted RBP5.56□□□□□ -1.52
SOX6-208ENST00000527619 HOXD3P31249 432 aaPredicted RBP5.56□□□□□ -1.52
SOX6-208ENST00000527619 ATP1A1-AS1Q5TC04 95 aa5.56□□□□□ -1.52
SOX6-208ENST00000527619 APC2O95996 2303 aa5.56□□□□□ -1.52
SOX6-208ENST00000527619 URB1O60287 2271 aaKnown RBP5.56□□□□□ -1.52
SOX6-208ENST00000527619 IGF2RP11717 2491 aa5.56□□□□□ -1.52
SOX6-208ENST00000527619 TIMM17BO60830 172 aa5.56□□□□□ -1.52
SOX6-208ENST00000527619 MED14OSP0DP75 135 aa5.56□□□□□ -1.52
SOX6-208ENST00000527619 POLR2KP53803 58 aaKnown RBP5.56□□□□□ -1.52
SOX6-208ENST00000527619 CD164L2Q6UWJ8 174 aa5.56□□□□□ -1.52
SOX6-208ENST00000527619 LY6G5BQ8NDX9 201 aa5.56□□□□□ -1.52
SOX6-208ENST00000527619 NPBQ8NG41 125 aa5.56□□□□□ -1.52
SOX6-208ENST00000527619 IGHV3-64A0A075B6Q5 118 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 IGHV4OR15-8A0A075B7B6 117 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 A0A087WW49 117 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 IGHV3-35A0A0C4DH35 117 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 IGHV1-69P01742 117 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 LENEPQ9Y5L5 61 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 TRAV8-3A0A0A6YYJ7 113 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 TRAV21A0A0B4J279 112 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 IGHV3-66A0A0C4DH42 116 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 PLAC8L1A1L4L8 177 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 I3L3M4 83 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 FAM223AQ8IWN6 122 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 EEF1AKMT3Q96AZ1 226 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 LITAFQ99732 161 aa5.55□□□□□ -1.52
SOX6-208ENST00000527619 ANKRD11Q6UB99 2663 aaPredicted RBP5.55□□□□□ -1.52
SOX6-208ENST00000527619 TRBV7-6A0A0J9YX20 115 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 DCANP1Q8TF63 244 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 DEFB104AQ8WTQ1 72 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 DYNLRB1Q9NP97 96 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 MOB4Q9Y3A3 225 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 DMXL2Q8TDJ6 3036 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 POLEQ07864 2286 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 ZZEF1O43149 2961 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 PRSS2P07478 247 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 SDIM1Q6ZPB5 146 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 LINC01356Q8N9X3 169 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 LINC00474Q9P2X8 69 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 PLCE1Q9P212 2302 aa5.54□□□□□ -1.52
SOX6-208ENST00000527619 ASPMQ8IZT6 3477 aa5.53□□□□□ -1.52
SOX6-208ENST00000527619 NDPQ00604 133 aa5.53□□□□□ -1.52
SOX6-208ENST00000527619 C19orf54Q5BKX5 351 aa5.53□□□□□ -1.52
SOX6-208ENST00000527619 RNASE6Q93091 150 aaKnown RBP5.53□□□□□ -1.52
SOX6-208ENST00000527619 KIF25-AS1Q9Y6Z4 181 aa5.53□□□□□ -1.52
SOX6-208ENST00000527619 LINC00315P59091 139 aa5.53□□□□□ -1.52
SOX6-208ENST00000527619 RHOHQ15669 191 aa5.53□□□□□ -1.52
SOX6-208ENST00000527619 MIAQ16674 131 aa5.53□□□□□ -1.52
SOX6-208ENST00000527619 SUMO4Q6EEV6 95 aa5.53□□□□□ -1.52
SOX6-208ENST00000527619 C22orf34Q6ZV56 151 aa5.53□□□□□ -1.52
SOX6-208ENST00000527619 TRBV27A0A0K0K1C4 114 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 CLPSL1A2RUU4 121 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 NXPH4O95158 308 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 CFHR3Q02985 330 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 Q6ZSV7 163 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 TMEM61Q8N0U2 210 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 ZFAND2AQ8N6M9 145 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 OPRPNQ99935 248 aaPredicted RBP5.52□□□□□ -1.53
SOX6-208ENST00000527619 ZNF580Q9UK33 172 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 PRRC2CQ9Y520 2896 aaKnown RBP5.52□□□□□ -1.53
SOX6-208ENST00000527619 MAP1BP46821 2468 aaKnown RBP5.52□□□□□ -1.53
SOX6-208ENST00000527619 IGHV3OR16-13A0A075B7E8 117 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 IGHV3-74A0A0B4J1X5 117 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 IGHG2P01859 326 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 IGHV3-30-3P0DP02 117 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 RNASE3P12724 160 aaKnown RBP5.52□□□□□ -1.53
SOX6-208ENST00000527619 ADAMTSL4-AS1Q5T5F5 129 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 TIMM21Q9BVV7 248 aa5.52□□□□□ -1.53
SOX6-208ENST00000527619 SMG1Q96Q15 3661 aaKnown RBP5.52□□□□□ -1.53
SOX6-208ENST00000527619 A0A0J9YXV3 536 aa5.51□□□□□ -1.53
SOX6-208ENST00000527619 ADARB2-AS1A8MUL3 147 aa5.51□□□□□ -1.53
SOX6-208ENST00000527619 SPENQ96T58 3664 aaKnown RBP5.51□□□□□ -1.53
SOX6-208ENST00000527619 TRBV6-5A0A0K0K1A5 114 aa5.51□□□□□ -1.53
SOX6-208ENST00000527619 PRYO14603 147 aa5.51□□□□□ -1.53
SOX6-208ENST00000527619 GNRH2O43555 120 aa5.51□□□□□ -1.53
SOX6-208ENST00000527619 RBM3P98179 157 aaKnown RBP5.51□□□□□ -1.53
SOX6-208ENST00000527619 DPM3Q9P2X0 92 aa5.51□□□□□ -1.53
SOX6-208ENST00000527619 EPG5Q9HCE0 2579 aa5.51□□□□□ -1.53
SOX6-208ENST00000527619 CCKP06307 115 aa5.51□□□□□ -1.53
SOX6-208ENST00000527619 ITLN2Q8WWU7 325 aaPredicted RBP5.51□□□□□ -1.53
SOX6-208ENST00000527619 KALRNO60229 2985 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 ARHGAP32A7KAX9 2087 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 ZFHX4Q86UP3 3567 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 IGHV3-49A0A0A0MS15 119 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 RBMY1BA6NDE4 496 aaKnown RBP5.5□□□□□ -1.53
SOX6-208ENST00000527619 RBMY1EA6NEQ0 496 aaKnown RBP5.5□□□□□ -1.53
SOX6-208ENST00000527619 F5H697 171 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 RBMY1DP0C7P1 496 aaKnown RBP5.5□□□□□ -1.53
SOX6-208ENST00000527619 RBMY1A1P0DJD3 496 aaKnown RBP5.5□□□□□ -1.53
SOX6-208ENST00000527619 RBMY1CP0DJD4 496 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 DAD1P61803 113 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 RBMY1FQ15415 496 aaKnown RBP5.5□□□□□ -1.53
SOX6-208ENST00000527619 C15orf32Q32M92 178 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 VMO1Q7Z5L0 202 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 FDCSPQ8NFU4 85 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 MDFIQ99750 246 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 C11orf68Q9H3H3 251 aaKnown RBP5.5□□□□□ -1.53
SOX6-208ENST00000527619 NDUFA12Q9UI09 145 aa5.5□□□□□ -1.53
SOX6-208ENST00000527619 FAM223BA6NKX1 122 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms