RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 TCL1BO95988 128 aa8.36□□□□□ -1.07
VPS11-202ENST00000526829 IGLV1-47P01700 117 aa8.36□□□□□ -1.07
VPS11-202ENST00000526829 BRK1Q8WUW1 75 aa8.36□□□□□ -1.07
VPS11-202ENST00000526829 LINC01600Q96MT4 127 aa8.36□□□□□ -1.07
VPS11-202ENST00000526829 ZNF256Q9Y2P7 627 aaPredicted RBP8.36□□□□□ -1.07
VPS11-202ENST00000526829 MOB4Q9Y3A3 225 aa8.36□□□□□ -1.07
VPS11-202ENST00000526829 KMT2CQ8NEZ4 4911 aaKnown RBP8.36□□□□□ -1.07
VPS11-202ENST00000526829 IGHV3-48P01763 117 aa8.35□□□□□ -1.07
VPS11-202ENST00000526829 HOXD3P31249 432 aaPredicted RBP8.35□□□□□ -1.07
VPS11-202ENST00000526829 Q6ZRU5 148 aa8.35□□□□□ -1.07
VPS11-202ENST00000526829 GTSCR1Q86UQ5 136 aa8.35□□□□□ -1.07
VPS11-202ENST00000526829 C11orf45Q8TAV5 145 aa8.35□□□□□ -1.07
VPS11-202ENST00000526829 TRGV11A0A075B6L2 103 aa8.35□□□□□ -1.07
VPS11-202ENST00000526829 IGKV2D-26A0A0A0MRZ7 120 aa8.35□□□□□ -1.07
VPS11-202ENST00000526829 H3BTX0 84 aa8.35□□□□□ -1.07
VPS11-202ENST00000526829 MRPL51Q4U2R6 128 aaKnown RBP8.35□□□□□ -1.07
VPS11-202ENST00000526829 LAMTOR3Q9UHA4 124 aa8.35□□□□□ -1.07
VPS11-202ENST00000526829 NBEAL2Q6ZNJ1 2754 aa8.34□□□□□ -1.07
VPS11-202ENST00000526829 hADV29S1A0JD25 119 aa8.34□□□□□ -1.07
VPS11-202ENST00000526829 NCBP2LA6PVI3 153 aaKnown RBP8.34□□□□□ -1.07
VPS11-202ENST00000526829 LYPD1Q8N2G4 141 aa8.34□□□□□ -1.07
VPS11-202ENST00000526829 NEXN-AS1Q8NBZ9 246 aa8.34□□□□□ -1.07
VPS11-202ENST00000526829 SERP1Q9Y6X1 66 aa8.34□□□□□ -1.07
VPS11-202ENST00000526829 SMIM26A0A096LP01 95 aa8.33□□□□□ -1.08
VPS11-202ENST00000526829 K7EIL1 84 aa8.33□□□□□ -1.08
VPS11-202ENST00000526829 FCER1GP30273 86 aa8.33□□□□□ -1.08
VPS11-202ENST00000526829 CRIP1P50238 77 aa8.33□□□□□ -1.08
VPS11-202ENST00000526829 LYZL1Q6UWQ5 148 aa8.33□□□□□ -1.08
VPS11-202ENST00000526829 DPH3P1Q9H4G8 78 aa8.33□□□□□ -1.08
VPS11-202ENST00000526829 LINC01619G3V211 115 aa8.33□□□□□ -1.08
VPS11-202ENST00000526829 NPYP01303 97 aa8.33□□□□□ -1.08
VPS11-202ENST00000526829 CKS2P33552 79 aa8.33□□□□□ -1.08
VPS11-202ENST00000526829 C10orf55Q5SWW7 151 aa8.33□□□□□ -1.08
VPS11-202ENST00000526829 UBE2E2Q96LR5 201 aa8.33□□□□□ -1.08
VPS11-202ENST00000526829 COL7A1Q02388 2944 aa8.32□□□□□ -1.08
VPS11-202ENST00000526829 ATOX1O00244 68 aa8.32□□□□□ -1.08
VPS11-202ENST00000526829 IGLV2-23P01705 113 aa8.32□□□□□ -1.08
VPS11-202ENST00000526829 FXYD7P58549 80 aa8.32□□□□□ -1.08
VPS11-202ENST00000526829 LINC00527Q9UJ94 153 aa8.32□□□□□ -1.08
VPS11-202ENST00000526829 TRBV19A0A075B6N1 114 aa8.31□□□□□ -1.08
VPS11-202ENST00000526829 IL4P05112 153 aa8.31□□□□□ -1.08
VPS11-202ENST00000526829 TWIST1Q15672 202 aa8.31□□□□□ -1.08
VPS11-202ENST00000526829 PRR15Q8IV56 129 aa8.31□□□□□ -1.08
VPS11-202ENST00000526829 H3BT86 120 aa8.31□□□□□ -1.08
VPS11-202ENST00000526829 KRTAP10-11P60412 298 aa8.31□□□□□ -1.08
VPS11-202ENST00000526829 UBE2D3P61077 147 aa8.31□□□□□ -1.08
VPS11-202ENST00000526829 UBE2D2P62837 147 aa8.31□□□□□ -1.08
VPS11-202ENST00000526829 EGFEM1PQ0D2K5 195 aa8.31□□□□□ -1.08
VPS11-202ENST00000526829 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
VPS11-202ENST00000526829 NXT2Q9NPJ8 142 aaKnown RBP8.31□□□□□ -1.08
VPS11-202ENST00000526829 PRSS1P07477 247 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 PSMB2P49721 201 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 LYZP61626 148 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 NPC2P61916 151 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 COX8CQ7Z4L0 72 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 TTTY13Q9BZ97 58 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 RYR3Q15413 4870 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 TENM3Q9P273 2699 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 CXCL5P42830 114 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 C10orf99Q6UWK7 81 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 C5orf56Q8N8D9 126 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 KLHL30-AS1Q8NEE0 82 aa8.3□□□□□ -1.08
VPS11-202ENST00000526829 MRGPRG-AS1Q2M3A8 158 aa8.29□□□□□ -1.08
VPS11-202ENST00000526829 TRBV7-3A0A075B6L6 115 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 SMKR1H3BMG3 65 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 SPRY2O43597 315 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 SH2D1AO60880 128 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 IGHG2P01859 326 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 DAZ2Q13117 558 aaKnown RBP8.28□□□□□ -1.08
VPS11-202ENST00000526829 PLGLAQ15195 96 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 DAZ4Q86SG3 579 aaKnown RBP8.28□□□□□ -1.08
VPS11-202ENST00000526829 RNF182Q8N6D2 247 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 C8orf49Q96NF6 230 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 UPK3BQ9BT76 320 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 DAZ1Q9NQZ3 744 aaKnown RBP8.28□□□□□ -1.08
VPS11-202ENST00000526829 DAZ3Q9NR90 486 aaKnown RBP8.28□□□□□ -1.08
VPS11-202ENST00000526829 IGHV1-3A0A0C4DH29 117 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 MYMXA0A1B0GTQ4 84 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 H3BRN7 92 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 LGALS9O00182 355 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 RPL27AP46776 148 aaKnown RBP8.28□□□□□ -1.08
VPS11-202ENST00000526829 SRSF9Q13242 221 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS11-202ENST00000526829 Q8N1Y9 231 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 MAPKAPK5-AS1Q8N8E1 139 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 HIST1H4GQ99525 98 aa8.28□□□□□ -1.08
VPS11-202ENST00000526829 LINC01548A6NM66 108 aa8.27□□□□□ -1.09
VPS11-202ENST00000526829 CEMP1Q6PRD7 247 aaPredicted RBP8.27□□□□□ -1.09
VPS11-202ENST00000526829 COPS9Q8WXC6 57 aa8.27□□□□□ -1.09
VPS11-202ENST00000526829 RNF185Q96GF1 192 aa8.27□□□□□ -1.09
VPS11-202ENST00000526829 IGHV3-72A0A0B4J1Y9 119 aa8.26□□□□□ -1.09
VPS11-202ENST00000526829 HIST1H4AP62805 103 aaKnown RBP8.26□□□□□ -1.09
VPS11-202ENST00000526829 ZNF56Q15929 161 aa8.26□□□□□ -1.09
VPS11-202ENST00000526829 Q8N8P6 123 aa8.26□□□□□ -1.09
VPS11-202ENST00000526829 B9D2Q9BPU9 175 aa8.26□□□□□ -1.09
VPS11-202ENST00000526829 TMSB15BA0A087X1C1 80 aa8.26□□□□□ -1.09
VPS11-202ENST00000526829 CCL24O00175 119 aa8.26□□□□□ -1.09
VPS11-202ENST00000526829 MRPS12O15235 138 aaKnown RBP8.26□□□□□ -1.09
VPS11-202ENST00000526829 APOC4P55056 127 aa8.26□□□□□ -1.09
VPS11-202ENST00000526829 PDE6HQ13956 83 aa8.26□□□□□ -1.09
VPS11-202ENST00000526829 C17orf77Q96MU5 243 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms