RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 UBE2D2P62837 147 aa14.78□□□□□ -0.04
SMIM3-201ENST00000526627 TMEM86BQ8N661 226 aa14.78□□□□□ -0.04
SMIM3-201ENST00000526627 BEAN1Q3B7T3 259 aa14.78□□□□□ -0.04
SMIM3-201ENST00000526627 RAX2Q96IS3 184 aa14.78□□□□□ -0.04
SMIM3-201ENST00000526627 MRPS36P82909 103 aaKnown RBP14.77□□□□□ -0.04
SMIM3-201ENST00000526627 ETDBQ3ZM63 59 aa14.77□□□□□ -0.04
SMIM3-201ENST00000526627 ODF3L2Q3SX64 289 aa14.77□□□□□ -0.05
SMIM3-201ENST00000526627 INSP01308 110 aa14.76□□□□□ -0.05
SMIM3-201ENST00000526627 CRYBA4P53673 196 aa14.76□□□□□ -0.05
SMIM3-201ENST00000526627 SFTA2Q6UW10 78 aa14.76□□□□□ -0.05
SMIM3-201ENST00000526627 IGHV3-53P01767 116 aa14.76□□□□□ -0.05
SMIM3-201ENST00000526627 C10orf126Q8N4M7 172 aa14.76□□□□□ -0.05
SMIM3-201ENST00000526627 AKAP9Q99996 3911 aa14.76□□□□□ -0.05
SMIM3-201ENST00000526627 EIF4EBP3O60516 100 aaPredicted RBP14.75□□□□□ -0.05
SMIM3-201ENST00000526627 RNASE13Q5GAN3 156 aaKnown RBP14.75□□□□□ -0.05
SMIM3-201ENST00000526627 CLUHP3Q96NS8 147 aa14.75□□□□□ -0.05
SMIM3-201ENST00000526627 SPXQ9BT56 116 aa14.75□□□□□ -0.05
SMIM3-201ENST00000526627 DNAJC9-AS1A6NH13 148 aa14.75□□□□□ -0.05
SMIM3-201ENST00000526627 RS1O15537 224 aa14.75□□□□□ -0.05
SMIM3-201ENST00000526627 UBE2D4Q9Y2X8 147 aa14.75□□□□□ -0.05
SMIM3-201ENST00000526627 AZU1P20160 251 aa14.74□□□□□ -0.05
SMIM3-201ENST00000526627 SMCPP49901 116 aaPredicted RBP14.74□□□□□ -0.05
SMIM3-201ENST00000526627 MYO9AB2RTY4 2548 aa14.74□□□□□ -0.05
SMIM3-201ENST00000526627 LOC107984156A0A0G2JMH3 177 aa14.74□□□□□ -0.05
SMIM3-201ENST00000526627 COTL1Q14019 142 aa14.74□□□□□ -0.05
SMIM3-201ENST00000526627 ARL17AQ8IVW1 177 aa14.74□□□□□ -0.05
SMIM3-201ENST00000526627 WFDC11Q8NEX6 87 aa14.74□□□□□ -0.05
SMIM3-201ENST00000526627 IGHV3-30-3P0DP02 117 aa14.73□□□□□ -0.05
SMIM3-201ENST00000526627 FHL3Q13643 280 aa14.73□□□□□ -0.05
SMIM3-201ENST00000526627 XCL2Q9UBD3 114 aa14.73□□□□□ -0.05
SMIM3-201ENST00000526627 ESM1Q9NQ30 184 aa14.72□□□□□ -0.05
SMIM3-201ENST00000526627 APCP25054 2843 aa14.72□□□□□ -0.05
SMIM3-201ENST00000526627 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.72□□□□□ -0.05
SMIM3-201ENST00000526627 IGKV2-29A2NJV5 120 aaPredicted RBP14.72□□□□□ -0.05
SMIM3-201ENST00000526627 A4D1N5 150 aa14.72□□□□□ -0.05
SMIM3-201ENST00000526627 PSMB2P49721 201 aa14.72□□□□□ -0.05
SMIM3-201ENST00000526627 C11orf44Q8N8P7 122 aa14.72□□□□□ -0.05
SMIM3-201ENST00000526627 DNAJC30Q96LL9 226 aa14.72□□□□□ -0.05
SMIM3-201ENST00000526627 SPANXA1Q9NS26 97 aa14.72□□□□□ -0.05
SMIM3-201ENST00000526627 IGHV3-38A0A0C4DH36 116 aa14.71□□□□□ -0.05
SMIM3-201ENST00000526627 C1orf158Q8N1D5 194 aa14.71□□□□□ -0.05
SMIM3-201ENST00000526627 TRAV25A0A0B4J276 109 aa14.71□□□□□ -0.05
SMIM3-201ENST00000526627 A0A0J9YXY3 114 aa14.71□□□□□ -0.05
SMIM3-201ENST00000526627 PRO1854Q9UHT4 67 aa14.71□□□□□ -0.05
SMIM3-201ENST00000526627 TRAV8-3A0A0A6YYJ7 113 aa14.7□□□□□ -0.06
SMIM3-201ENST00000526627 A0A1W2PRX2 142 aa14.7□□□□□ -0.06
SMIM3-201ENST00000526627 TIMM21Q9BVV7 248 aa14.7□□□□□ -0.06
SMIM3-201ENST00000526627 Q6ZUT4 128 aa14.7□□□□□ -0.06
SMIM3-201ENST00000526627 MUSTN1Q8IVN3 82 aa14.7□□□□□ -0.06
SMIM3-201ENST00000526627 IL17DQ8TAD2 202 aa14.7□□□□□ -0.06
SMIM3-201ENST00000526627 TLN2Q9Y4G6 2542 aa14.7□□□□□ -0.06
SMIM3-201ENST00000526627 INSL3P51460 131 aa14.69□□□□□ -0.06
SMIM3-201ENST00000526627 LITAFQ99732 161 aa14.69□□□□□ -0.06
SMIM3-201ENST00000526627 TINCRA0A1B0GVN0 87 aa14.69□□□□□ -0.06
SMIM3-201ENST00000526627 ADARB2-AS1A8MUL3 147 aa14.69□□□□□ -0.06
SMIM3-201ENST00000526627 TCL1BO95988 128 aa14.69□□□□□ -0.06
SMIM3-201ENST00000526627 TMEM263Q8WUH6 116 aaKnown RBP14.69□□□□□ -0.06
SMIM3-201ENST00000526627 IGHV1-58A0A0C4DH39 117 aa14.68□□□□□ -0.06
SMIM3-201ENST00000526627 CCL24O00175 119 aa14.68□□□□□ -0.06
SMIM3-201ENST00000526627 STHQ8IWL8 128 aa14.67□□□□□ -0.06
SMIM3-201ENST00000526627 ITPR3Q14573 2671 aa14.67□□□□□ -0.06
SMIM3-201ENST00000526627 TMEM238C9JI98 176 aa14.67□□□□□ -0.06
SMIM3-201ENST00000526627 TSSC4Q9Y5U2 329 aaPredicted RBP14.67□□□□□ -0.06
SMIM3-201ENST00000526627 LYRM7Q5U5X0 104 aa14.66□□□□□ -0.06
SMIM3-201ENST00000526627 SONP18583 2426 aaKnown RBP14.66□□□□□ -0.06
SMIM3-201ENST00000526627 A0A0B4J2C4 111 aa14.66□□□□□ -0.06
SMIM3-201ENST00000526627 IGHV3-33P01772 117 aa14.66□□□□□ -0.06
SMIM3-201ENST00000526627 VSIG2Q96IQ7 327 aa14.66□□□□□ -0.06
SMIM3-201ENST00000526627 IGHV3OR16-12A0A075B7B8 117 aa14.65□□□□□ -0.06
SMIM3-201ENST00000526627 J3QR89 54 aa14.65□□□□□ -0.06
SMIM3-201ENST00000526627 TEX29Q8N6K0 151 aa14.65□□□□□ -0.06
SMIM3-201ENST00000526627 CHD6Q8TD26 2715 aa14.64□□□□□ -0.07
SMIM3-201ENST00000526627 A8MZ25 164 aa14.64□□□□□ -0.07
SMIM3-201ENST00000526627 EPG5Q9HCE0 2579 aa14.64□□□□□ -0.07
SMIM3-201ENST00000526627 TRBV20-1A0A075B6N2 111 aa14.64□□□□□ -0.07
SMIM3-201ENST00000526627 SPINK8P0C7L1 97 aa14.64□□□□□ -0.07
SMIM3-201ENST00000526627 HIST2H2BCQ6DN03 193 aa14.64□□□□□ -0.07
SMIM3-201ENST00000526627 CITED2Q99967 270 aaPredicted RBP14.64□□□□□ -0.07
SMIM3-201ENST00000526627 C1QTNF4Q9BXJ3 329 aa14.64□□□□□ -0.07
SMIM3-201ENST00000526627 NBPF19A0A087WUL8 3843 aa14.63□□□□□ -0.07
SMIM3-201ENST00000526627 ATP6V0E2Q8NHE4 81 aa14.63□□□□□ -0.07
SMIM3-201ENST00000526627 ZNF418Q8TF45 676 aaPredicted RBP14.63□□□□□ -0.07
SMIM3-201ENST00000526627 NDUFA12Q9UI09 145 aa14.63□□□□□ -0.07
SMIM3-201ENST00000526627 GAGE12HA6NDE8 117 aa14.63□□□□□ -0.07
SMIM3-201ENST00000526627 KRTAP1-1Q07627 177 aa14.63□□□□□ -0.07
SMIM3-201ENST00000526627 ADAMTSL4-AS1Q5T5F5 129 aa14.63□□□□□ -0.07
SMIM3-201ENST00000526627 TRGV1A0A0A0MS02 117 aa14.62□□□□□ -0.07
SMIM3-201ENST00000526627 SBSPONQ8IVN8 264 aa14.62□□□□□ -0.07
SMIM3-201ENST00000526627 WNK1Q9H4A3 2382 aa14.62□□□□□ -0.07
SMIM3-201ENST00000526627 SPATA25Q9BR10 227 aa14.61□□□□□ -0.07
SMIM3-201ENST00000526627 FOXI1Q12951 378 aa14.61□□□□□ -0.07
SMIM3-201ENST00000526627 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.61□□□□□ -0.07
SMIM3-201ENST00000526627 CUBNO60494 3623 aa14.6□□□□□ -0.07
SMIM3-201ENST00000526627 IGLV5-45A0A087WSX0 123 aa14.6□□□□□ -0.07
SMIM3-201ENST00000526627 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.6□□□□□ -0.07
SMIM3-201ENST00000526627 GIG44P09565 113 aaPredicted RBP14.6□□□□□ -0.07
SMIM3-201ENST00000526627 Q6ZTI0 123 aa14.6□□□□□ -0.07
SMIM3-201ENST00000526627 SPANXDQ9BXN6 97 aa14.6□□□□□ -0.07
SMIM3-201ENST00000526627 SPANXCQ9NY87 97 aa14.6□□□□□ -0.07
SMIM3-201ENST00000526627 ERG28Q9UKR5 140 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms