RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 TMEM263Q8WUH6 116 aaKnown RBP3.13□□□□□ -1.91
USP48-211ENST00000526044 TMEM242Q9NWH2 141 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 PHLDA3Q9Y5J5 127 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 TIMM8BQ9Y5J9 83 aaPredicted RBP3.13□□□□□ -1.91
USP48-211ENST00000526044 V9GYV3 84 aa3.13□□□□□ -1.91
USP48-211ENST00000526044 DNAH3Q8TD57 4116 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 SMKR1H3BMG3 65 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 H3BVH4 76 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 M0R2P5 195 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 SPART-AS1P0CW21 52 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 RNASE3P12724 160 aaKnown RBP3.12□□□□□ -1.91
USP48-211ENST00000526044 FOXA3P55318 350 aaPredicted RBP3.12□□□□□ -1.91
USP48-211ENST00000526044 TCL1AP56279 114 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 DAZ2Q13117 558 aaKnown RBP3.12□□□□□ -1.91
USP48-211ENST00000526044 RHEBQ15382 184 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 LGALS9BQ3B8N2 356 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 SPANXN1Q5VSR9 72 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 LYZL1Q6UWQ5 148 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.12□□□□□ -1.91
USP48-211ENST00000526044 Q8NAQ8 132 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 C11orf72Q8NBR9 251 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 TSKUQ8WUA8 353 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 BORCS7Q96B45 105 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 PGLYRP4Q96LB8 373 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 JPT2Q9H910 190 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 NOP10Q9NPE3 64 aaKnown RBP3.12□□□□□ -1.91
USP48-211ENST00000526044 IL36BQ9NZH7 164 aa3.12□□□□□ -1.91
USP48-211ENST00000526044 A0A087WWC5 75 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 TRGV1A0A0A0MS02 117 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 TINCRA0A1B0GVN0 87 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 SMIM27A0A1W2PRY6 76 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 PLAC8L1A1L4L8 177 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 LYRM9A8MSI8 78 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 HIGD1CA8MV81 97 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 SPINK4O60575 86 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 OR5AL1P0C617 328 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 IGLC6P0CF74 106 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 DEFB130BP0DP73 79 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 DEFB130AP0DP74 79 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 NTF3P20783 257 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 S100PP25815 95 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 NDUFV3P56181 108 aaKnown RBP3.11□□□□□ -1.91
USP48-211ENST00000526044 RAB4BP61018 213 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 CACNG7P62955 275 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 FAM222AQ5U5X8 452 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 Q6ZVH6 145 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 CBLN2Q8IUK8 224 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 FER1L6-AS1Q8NA97 138 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 NUP35Q8NFH5 326 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 GTSF1Q8WW33 167 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 C9orf85Q96MD7 179 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 IMMP2LQ96T52 175 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 PPDPFQ9H3Y8 114 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 NAT8BQ9UHF3 227 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 U3KQK5 164 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 MUC4Q99102 2169 aa3.11□□□□□ -1.91
USP48-211ENST00000526044 TRGV2A0A075B6R0 118 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 MUC21A0A0G2JKD1 596 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 LOC100131303A0A0U1RQF7 123 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 MUC21A0A140T8X8 626 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 A0A1B0GUT8 65 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 TEX48A0A1B0GUV7 120 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 A8MWV9 139 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 M0R381 172 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 DAD1P61803 113 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 Q6ZR54 194 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 Q6ZTI0 123 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 MRPL52Q86TS9 123 aaKnown RBP3.1□□□□□ -1.91
USP48-211ENST00000526044 LINC00612Q8N6U2 182 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 OR10AG1Q8NH19 301 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 BTF3L4Q96K17 158 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 OCR1Q9BZK8 76 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 C11orf68Q9H3H3 251 aaKnown RBP3.1□□□□□ -1.91
USP48-211ENST00000526044 SMCO4Q9NRQ5 59 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 MRPL16Q9NX20 251 aaKnown RBP3.1□□□□□ -1.91
USP48-211ENST00000526044 DNAH9Q9NYC9 4486 aa3.1□□□□□ -1.91
USP48-211ENST00000526044 HUWE1Q7Z6Z7 4374 aaKnown RBP3.09□□□□□ -1.91
USP48-211ENST00000526044 TRAV9-1A0A075B6T8 112 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 TGIF2-C20orf24A0A0A6YYL0 155 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 S100A8P05109 93 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 TRGC1P0CF51 173 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 SMIM17P0DL12 118 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 CTRLP40313 264 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 CD164Q04900 197 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 C4orf26Q17RF5 130 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 C12orf74Q32Q52 190 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 SH2D6Q7Z4S9 175 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 C14orf178Q8N769 122 aaPredicted RBP3.09□□□□□ -1.91
USP48-211ENST00000526044 C18orf15Q96N68 181 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 CELA1Q9UNI1 258 aa3.09□□□□□ -1.91
USP48-211ENST00000526044 IGHV3-73A0A0B4J1V6 119 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 TRAV4A0A0B4J268 109 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 TRGV4A0A0C4DH28 118 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 IGHV3-53P01767 116 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 ATP5G1P05496 136 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 CRYGDP07320 174 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 HTN3P15516 51 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 EVI2AP22794 236 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 ELOBQ15370 118 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 CFAP126Q5VTH2 177 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms