RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 LINC00269Q8N2A0 174 aa6.14□□□□□ -1.43
SF3B2-204ENST00000525207 C20orf203Q8NBC4 194 aa6.14□□□□□ -1.43
SF3B2-204ENST00000525207 TMEM243Q9BU79 118 aa6.14□□□□□ -1.43
SF3B2-204ENST00000525207 CHAC1Q9BUX1 264 aa6.14□□□□□ -1.43
SF3B2-204ENST00000525207 RNASE7Q9H1E1 156 aaKnown RBP6.14□□□□□ -1.43
SF3B2-204ENST00000525207 TMEM250H0YL14 139 aa6.13□□□□□ -1.43
SF3B2-204ENST00000525207 REG3AQ06141 175 aa6.13□□□□□ -1.43
SF3B2-204ENST00000525207 WDR73Q6P4I2 378 aa6.13□□□□□ -1.43
SF3B2-204ENST00000525207 LYPD6BQ8NI32 183 aa6.13□□□□□ -1.43
SF3B2-204ENST00000525207 CIRBP-AS1Q8TBR5 109 aa6.13□□□□□ -1.43
SF3B2-204ENST00000525207 NIT2Q9NQR4 276 aa6.13□□□□□ -1.43
SF3B2-204ENST00000525207 IGLV4-60A0A075B6I1 120 aa6.12□□□□□ -1.43
SF3B2-204ENST00000525207 A0A1B0GUV1 79 aa6.12□□□□□ -1.43
SF3B2-204ENST00000525207 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
SF3B2-204ENST00000525207 PRSS1P07477 247 aa6.12□□□□□ -1.43
SF3B2-204ENST00000525207 TWIST1Q15672 202 aa6.12□□□□□ -1.43
SF3B2-204ENST00000525207 OCC1Q8TAD7 63 aa6.12□□□□□ -1.43
SF3B2-204ENST00000525207 GTSF1Q8WW33 167 aa6.12□□□□□ -1.43
SF3B2-204ENST00000525207 GFRA4Q9GZZ7 299 aa6.12□□□□□ -1.43
SF3B2-204ENST00000525207 IGLV10-54A0A075B6I4 117 aa6.11□□□□□ -1.43
SF3B2-204ENST00000525207 TRAV26-2A0A0B4J265 109 aa6.11□□□□□ -1.43
SF3B2-204ENST00000525207 AMTP48728 403 aa6.11□□□□□ -1.43
SF3B2-204ENST00000525207 KRTAP10-4P60372 401 aaPredicted RBP6.11□□□□□ -1.43
SF3B2-204ENST00000525207 BLOC1S1P78537 153 aa6.11□□□□□ -1.43
SF3B2-204ENST00000525207 COTL1Q14019 142 aa6.11□□□□□ -1.43
SF3B2-204ENST00000525207 GATD1Q8NB37 220 aa6.11□□□□□ -1.43
SF3B2-204ENST00000525207 TRAV8-4A0A0B4J246 113 aa6.1□□□□□ -1.43
SF3B2-204ENST00000525207 UBE2L6O14933 153 aa6.1□□□□□ -1.43
SF3B2-204ENST00000525207 CT83Q5H943 113 aa6.1□□□□□ -1.43
SF3B2-204ENST00000525207 FAM231DQ6ZW35 169 aa6.1□□□□□ -1.43
SF3B2-204ENST00000525207 C9orf163Q8N9P6 203 aa6.1□□□□□ -1.43
SF3B2-204ENST00000525207 DEFB104AQ8WTQ1 72 aa6.1□□□□□ -1.43
SF3B2-204ENST00000525207 RPL39LQ96EH5 51 aaKnown RBP6.1□□□□□ -1.43
SF3B2-204ENST00000525207 GATCO43716 136 aaKnown RBP6.09□□□□□ -1.43
SF3B2-204ENST00000525207 NDUFS6O75380 124 aaKnown RBP6.09□□□□□ -1.43
SF3B2-204ENST00000525207 DGAT2L7PQ6IED9 249 aa6.09□□□□□ -1.43
SF3B2-204ENST00000525207 A8MWL6 223 aa6.08□□□□□ -1.44
SF3B2-204ENST00000525207 NCR2O95944 276 aa6.08□□□□□ -1.44
SF3B2-204ENST00000525207 CEBPGP53567 150 aa6.08□□□□□ -1.44
SF3B2-204ENST00000525207 FOXA3P55318 350 aaPredicted RBP6.08□□□□□ -1.44
SF3B2-204ENST00000525207 CNBPP62633 177 aaKnown RBP6.08□□□□□ -1.44
SF3B2-204ENST00000525207 SMIM15Q7Z3B0 74 aa6.08□□□□□ -1.44
SF3B2-204ENST00000525207 LINC01551Q86U37 167 aa6.08□□□□□ -1.44
SF3B2-204ENST00000525207 CLRN3Q8NCR9 226 aa6.08□□□□□ -1.44
SF3B2-204ENST00000525207 SMIM7Q9BQ49 75 aa6.08□□□□□ -1.44
SF3B2-204ENST00000525207 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.08□□□□□ -1.44
SF3B2-204ENST00000525207 hDV102S1A0JD36 115 aa6.07□□□□□ -1.44
SF3B2-204ENST00000525207 SDHAF1A6NFY7 115 aa6.07□□□□□ -1.44
SF3B2-204ENST00000525207 KRTAP29-1A8MX34 341 aaPredicted RBP6.07□□□□□ -1.44
SF3B2-204ENST00000525207 PANO1I0J062 215 aa6.07□□□□□ -1.44
SF3B2-204ENST00000525207 APCSP02743 223 aa6.07□□□□□ -1.44
SF3B2-204ENST00000525207 TEX261Q6UWH6 196 aa6.07□□□□□ -1.44
SF3B2-204ENST00000525207 FAM210AQ96ND0 272 aa6.07□□□□□ -1.44
SF3B2-204ENST00000525207 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.06□□□□□ -1.44
SF3B2-204ENST00000525207 TRBV6-5A0A0K0K1A5 114 aa6.06□□□□□ -1.44
SF3B2-204ENST00000525207 IGKV2-29A2NJV5 120 aaPredicted RBP6.06□□□□□ -1.44
SF3B2-204ENST00000525207 HIGD1CA8MV81 97 aa6.06□□□□□ -1.44
SF3B2-204ENST00000525207 H7C423 109 aa6.06□□□□□ -1.44
SF3B2-204ENST00000525207 CIRBPQ14011 172 aaKnown RBP6.06□□□□□ -1.44
SF3B2-204ENST00000525207 C15orf56Q8N910 161 aa6.06□□□□□ -1.44
SF3B2-204ENST00000525207 TSKUQ8WUA8 353 aa6.06□□□□□ -1.44
SF3B2-204ENST00000525207 BORCS7Q96B45 105 aa6.06□□□□□ -1.44
SF3B2-204ENST00000525207 EIF5A2Q9GZV4 153 aaKnown RBP6.06□□□□□ -1.44
SF3B2-204ENST00000525207 LRP1Q07954 4544 aaKnown RBP6.05□□□□□ -1.44
SF3B2-204ENST00000525207 A0A1B0GUT8 65 aa6.05□□□□□ -1.44
SF3B2-204ENST00000525207 ZNF727A8MUV8 499 aa6.05□□□□□ -1.44
SF3B2-204ENST00000525207 SRP19P09132 144 aaKnown RBP6.05□□□□□ -1.44
SF3B2-204ENST00000525207 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
SF3B2-204ENST00000525207 AMMECR1LQ6DCA0 310 aa6.05□□□□□ -1.44
SF3B2-204ENST00000525207 SDIM1Q6ZPB5 146 aa6.05□□□□□ -1.44
SF3B2-204ENST00000525207 AP5S1Q9NUS5 200 aa6.05□□□□□ -1.44
SF3B2-204ENST00000525207 PKHD1L1Q86WI1 4243 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.04□□□□□ -1.44
SF3B2-204ENST00000525207 IGKV3OR2-268A0A0C4DH90 116 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 FAM231BA6NCW3 169 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 GAGE12HA6NDE8 117 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 I3L3M4 83 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 GAS8-AS1O95177 125 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 TSHBP01222 138 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 SLPIP03973 132 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 FGF6P10767 208 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 ZNF25P17030 456 aaPredicted RBP6.04□□□□□ -1.44
SF3B2-204ENST00000525207 RNASEKQ6P5S7 137 aaKnown RBP6.04□□□□□ -1.44
SF3B2-204ENST00000525207 RNF185Q96GF1 192 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 TMEM191AQ9H0A3 160 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 OSTCQ9NRP0 149 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 TMEM242Q9NWH2 141 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 V9GYV3 84 aa6.04□□□□□ -1.44
SF3B2-204ENST00000525207 FAT3Q8TDW7 4589 aa6.03□□□□□ -1.44
SF3B2-204ENST00000525207 IGHV3-64A0A075B6Q5 118 aa6.03□□□□□ -1.44
SF3B2-204ENST00000525207 GVQW2A0A096LPI5 108 aaPredicted RBP6.03□□□□□ -1.44
SF3B2-204ENST00000525207 ESDP10768 282 aa6.03□□□□□ -1.44
SF3B2-204ENST00000525207 RPS10P46783 165 aaKnown RBP6.03□□□□□ -1.44
SF3B2-204ENST00000525207 AMN1Q8IY45 258 aa6.03□□□□□ -1.44
SF3B2-204ENST00000525207 SPACA4Q8TDM5 124 aa6.03□□□□□ -1.44
SF3B2-204ENST00000525207 CHCHD10Q8WYQ3 142 aaPredicted RBP6.03□□□□□ -1.44
SF3B2-204ENST00000525207 ISOC2Q96AB3 205 aa6.03□□□□□ -1.44
SF3B2-204ENST00000525207 MRAP2Q96G30 205 aa6.03□□□□□ -1.44
SF3B2-204ENST00000525207 C7orf77A4D0Y5 90 aa6.02□□□□□ -1.45
SF3B2-204ENST00000525207 CHTF8P0CG12 524 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms