RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 DNAH1Q9P2D7 4330 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 IGLV10-54A0A075B6I4 117 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 TRBV25-1A0A075B6N4 114 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 A0A1B0GW15 77 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 I3L3M4 83 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 LECT2O14960 151 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 APCSP02743 223 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 S100A8P05109 93 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 FCER1GP30273 86 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 POLR2KP53803 58 aaKnown RBP3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 SUMO2P61956 95 aaKnown RBP3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 RBX1P62877 108 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 ELOBQ15370 118 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 RNASE13Q5GAN3 156 aaKnown RBP3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 TTC32Q5I0X7 151 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 LINC01556Q5JQF7 62 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 RNASEKQ6P5S7 137 aaKnown RBP3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 ENHOQ6UWT2 76 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 LINC00269Q8N2A0 174 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 FRZBQ92765 325 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 CHCHD7Q9BUK0 85 aa3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 MRPL18Q9H0U6 180 aaKnown RBP3.09□□□□□ -1.91
CHMP4A-202ENST00000524955 SACSQ9NZJ4 4579 aa3.09□□□□□ -1.92
CHMP4A-202ENST00000524955 VPS13DQ5THJ4 4388 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 IGKV2D-24A0A075B6R9 120 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 TRAV9-2A0A087WT02 112 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 TRBV6-5A0A0K0K1A5 114 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 IBA57-AS1B1ANH7 110 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 VCYO14598 125 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 UBE2L6O14933 153 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 RPL39P62891 51 aaKnown RBP3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 FABP9Q0Z7S8 132 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 WFDC2Q14508 124 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 AMMECR1LQ6DCA0 310 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 Q6ZRN7 208 aaPredicted RBP3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 ORMDL3Q8N138 153 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 C20orf203Q8NBC4 194 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 YPEL4Q96NS1 127 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 OPRPNQ99935 248 aaPredicted RBP3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 SMIM2Q9BVW6 85 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 TRAPPC1Q9Y5R8 145 aa3.08□□□□□ -1.92
CHMP4A-202ENST00000524955 LYSTQ99698 3801 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 TRBV24-1A0A075B6N3 115 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 TRBV27A0A0K0K1C4 114 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 PSCAO43653 123 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 HLA-DQA1P01909 254 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 CRPP02741 224 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 FGF6P10767 208 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 ESDP10768 282 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 IFI27P40305 119 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 TMEM97Q5BJF2 176 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 ZC2HC1BQ5TFG8 222 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 MAPKAPK5-AS1Q8N8E1 139 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 BAALCQ8WXS3 180 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 KIR2DL4Q99706 377 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 ALKBH7Q9BT30 221 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 GNB1LQ9BYB4 327 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 MAP1LC3AQ9H492 121 aa3.07□□□□□ -1.92
CHMP4A-202ENST00000524955 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 TRAV9-1A0A075B6T8 112 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 A0A1B0GVY2 172 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 PPP1R17O96001 155 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 PPBPP02775 128 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 RAB5AP20339 215 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 KRTAP10-2P60368 255 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 REG3AQ06141 175 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 PMCHL1Q16048 86 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 Q6ZUT4 128 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 C10orf126Q8N4M7 172 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 PRSS3P2Q8NHM4 247 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 C20orf78Q9BR46 151 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 SMCO4Q9NRQ5 59 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 UBE2D4Q9Y2X8 147 aa3.06□□□□□ -1.92
CHMP4A-202ENST00000524955 A0A087WTM6 91 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 TRAV8-3A0A0A6YYJ7 113 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 TRAV13-1A0A0B4J241 112 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 LRCOL1A6NCL2 159 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 GAGE12HA6NDE8 117 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 ATP6V1G1O75348 118 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 TRGC2P03986 189 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 BTF3P20290 206 aaKnown RBP3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 LINC01620Q4KN68 170 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 DGAT2L7PQ6IED9 249 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 SPATA12Q7Z6I5 190 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 Q8N8P6 123 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 OR5A1Q8NGJ0 315 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 FAM104AQ969W3 186 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 URB1-AS1Q96HZ7 61 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 TMEM101Q96IK0 257 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 C1orf43Q9BWL3 253 aa3.05□□□□□ -1.92
CHMP4A-202ENST00000524955 A0A1B0GUV1 79 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 COLCA2A8K830 154 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 PRSS47A8MTI9 375 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 PHOX2AO14813 284 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 CCL25O15444 150 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 MT-ND6P03923 174 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 XCL1P47992 114 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 RPL32P62910 135 aaKnown RBP3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 HAMPP81172 84 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms