RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 V9GYV3 84 aa2□□□□□ -2.09
CSDE1-208ENST00000524652 FAT1Q14517 4588 aa2□□□□□ -2.09
CSDE1-208ENST00000524652 LOC100131303A0A0U1RQF7 123 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 TMEM189A5PLL7 270 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 LYRM9A8MSI8 78 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 F8W036 122 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 P01737 135 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 IGHV3-53P01767 116 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 CXCL1P09341 107 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 OR5AL1P0C617 328 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 DEFB130BP0DP73 79 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 DEFB130AP0DP74 79 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 FOXA3P55318 350 aaPredicted RBP1.99□□□□□ -2.09
CSDE1-208ENST00000524652 NDUFV3P56181 108 aaKnown RBP1.99□□□□□ -2.09
CSDE1-208ENST00000524652 LINC00315P59091 139 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 DAZ2Q13117 558 aaKnown RBP1.99□□□□□ -2.09
CSDE1-208ENST00000524652 ADIRFQ15847 76 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 Q1RN00 199 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 TMEM241Q24JQ0 296 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 SOHLH1Q5JUK2 328 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 CASC10Q5T4H9 136 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 CFAP126Q5VTH2 177 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 ZFAND6Q6FIF0 208 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 ATRAIDQ6UW56 229 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 UQCC3Q6UW78 93 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 LYZL1Q6UWQ5 148 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 ZNF493Q6ZR52 646 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 OR2D3Q8NGH3 330 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 SFRP2Q96HF1 295 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 VSIG2Q96IQ7 327 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 KCNS1Q96KK3 526 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 C18orf15Q96N68 181 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 SEC11CQ9BY50 192 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 RPP21Q9H633 154 aaKnown RBP1.99□□□□□ -2.09
CSDE1-208ENST00000524652 OSTCQ9NRP0 149 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 IL36BQ9NZH7 164 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 TIMM8BQ9Y5J9 83 aaPredicted RBP1.99□□□□□ -2.09
CSDE1-208ENST00000524652 SRRM2Q9UQ35 2752 aaKnown RBP1.99□□□□□ -2.09
CSDE1-208ENST00000524652 HSPG2P98160 4391 aa1.99□□□□□ -2.09
CSDE1-208ENST00000524652 DMBT1Q9UGM3 2413 aaPredicted RBP1.98□□□□□ -2.09
CSDE1-208ENST00000524652 DEFB131BA0A096LNP1 70 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 TRGV1A0A0A0MS02 117 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 IGHV3-73A0A0B4J1V6 119 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 TRAV4A0A0B4J268 109 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 A0A0J9YY99 117 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 SMIM27A0A1W2PRY6 76 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 HIGD1CA8MV81 97 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 M0R2P5 195 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 M0R381 172 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 RS1O15537 224 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 GATCO43716 136 aaKnown RBP1.98□□□□□ -2.09
CSDE1-208ENST00000524652 CRYGDP07320 174 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 SPART-AS1P0CW21 52 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 P0DMU3 169 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 FAM231AP0DMU4 169 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 FAM231CP0DMU5 169 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 HTN3P15516 51 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 NTF3P20783 257 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 CTRLP40313 264 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 ASIPP42127 132 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 SSTP61278 116 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 DAD1P61803 113 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 LGALS9BQ3B8N2 356 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 FAM74A3Q4VXF1 159 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 FER1L6-AS1Q8NA97 138 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 NUP35Q8NFH5 326 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 MUC7Q8TAX7 377 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 PTH2Q96A98 100 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 PGLYRP4Q96LB8 373 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 SPXQ9BT56 116 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 CNFNQ9BYD5 112 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 APLNQ9ULZ1 77 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 CARHSP1Q9Y2V2 147 aaKnown RBP1.98□□□□□ -2.09
CSDE1-208ENST00000524652 HMCN2Q8NDA2 5059 aa1.98□□□□□ -2.09
CSDE1-208ENST00000524652 TRAV26-1A0A087WT03 109 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 A0A096LPF7 62 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 TRAV10A0A0B4J240 114 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 TRAV26-2A0A0B4J265 109 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 A0A1B0GXF2 115 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 FAM168BA1KXE4 195 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 H0Y9J4 135 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 APOC3P02656 99 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 ATP5G1P05496 136 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 LINC00694P0DN24 101 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 EVI2AP22794 236 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 S100A4P26447 101 aaKnown RBP1.97□□□□□ -2.09
CSDE1-208ENST00000524652 CRYBA4P53673 196 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 FAM74A4Q5TZK3 123 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 CEMP1Q6PRD7 247 aaPredicted RBP1.97□□□□□ -2.09
CSDE1-208ENST00000524652 C14orf178Q8N769 122 aaPredicted RBP1.97□□□□□ -2.09
CSDE1-208ENST00000524652 SLC25A29Q8N8R3 303 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 TSKUQ8WUA8 353 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 RNF185Q96GF1 192 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 YPEL4Q96NS1 127 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 TPPP3Q9BW30 176 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 PHLDA3Q9Y5J5 127 aa1.97□□□□□ -2.09
CSDE1-208ENST00000524652 TRGV2A0A075B6R0 118 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 A0A087WZ39 114 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 A0A1B0GUT8 65 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 TEX48A0A1B0GUV7 120 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms