RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 C1orf43Q9BWL3 253 aa13.82□□□□□ -0.2
TRAPPC9-215ENST00000524162 GCSHP23434 173 aa13.81□□□□□ -0.2
TRAPPC9-215ENST00000524162 CLLU1Q5K131 121 aa13.81□□□□□ -0.2
TRAPPC9-215ENST00000524162 Q8N976 141 aa13.81□□□□□ -0.2
TRAPPC9-215ENST00000524162 IGLV5-52A0A0A0MRZ9 124 aa13.8□□□□□ -0.2
TRAPPC9-215ENST00000524162 SDHAF1A6NFY7 115 aa13.8□□□□□ -0.2
TRAPPC9-215ENST00000524162 H7C423 109 aa13.8□□□□□ -0.2
TRAPPC9-215ENST00000524162 PPP1R17O96001 155 aa13.8□□□□□ -0.2
TRAPPC9-215ENST00000524162 RAB4AP20338 218 aa13.8□□□□□ -0.2
TRAPPC9-215ENST00000524162 GAGE6Q13070 117 aa13.8□□□□□ -0.2
TRAPPC9-215ENST00000524162 RPL39LQ96EH5 51 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-215ENST00000524162 RNF185Q96GF1 192 aa13.8□□□□□ -0.2
TRAPPC9-215ENST00000524162 AMTP48728 403 aa13.79□□□□□ -0.2
TRAPPC9-215ENST00000524162 PNRC1Q12796 327 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-215ENST00000524162 TRAV8-4A0A0B4J246 113 aa13.77□□□□□ -0.21
TRAPPC9-215ENST00000524162 I3L3M4 83 aa13.77□□□□□ -0.21
TRAPPC9-215ENST00000524162 UBE2L6O14933 153 aa13.77□□□□□ -0.21
TRAPPC9-215ENST00000524162 PPP1R2P9O14990 202 aa13.77□□□□□ -0.21
TRAPPC9-215ENST00000524162 WFDC2Q14508 124 aa13.77□□□□□ -0.21
TRAPPC9-215ENST00000524162 C14orf177Q52M58 125 aa13.77□□□□□ -0.21
TRAPPC9-215ENST00000524162 C20orf203Q8NBC4 194 aa13.77□□□□□ -0.21
TRAPPC9-215ENST00000524162 S100A8P05109 93 aa13.76□□□□□ -0.21
TRAPPC9-215ENST00000524162 POLR2KP53803 58 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-215ENST00000524162 KRTAP10-1P60331 282 aa13.76□□□□□ -0.21
TRAPPC9-215ENST00000524162 AMN1Q8IY45 258 aa13.76□□□□□ -0.21
TRAPPC9-215ENST00000524162 LINC00269Q8N2A0 174 aa13.76□□□□□ -0.21
TRAPPC9-215ENST00000524162 BAALCQ8WXS3 180 aa13.76□□□□□ -0.21
TRAPPC9-215ENST00000524162 TMEM70Q9BUB7 260 aa13.76□□□□□ -0.21
TRAPPC9-215ENST00000524162 ST20Q9HBF5 79 aa13.76□□□□□ -0.21
TRAPPC9-215ENST00000524162 PCLOQ9Y6V0 5065 aa13.75□□□□□ -0.21
TRAPPC9-215ENST00000524162 TRBV27A0A0K0K1C4 114 aa13.75□□□□□ -0.21
TRAPPC9-215ENST00000524162 REG3AQ06141 175 aa13.75□□□□□ -0.21
TRAPPC9-215ENST00000524162 LINC00862A6NCI5 91 aa13.74□□□□□ -0.21
TRAPPC9-215ENST00000524162 APCSP02743 223 aa13.74□□□□□ -0.21
TRAPPC9-215ENST00000524162 FUSP35637 526 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAPPC9-215ENST00000524162 FAM104BQ5XKR9 115 aa13.74□□□□□ -0.21
TRAPPC9-215ENST00000524162 PMCHP20382 165 aa13.73□□□□□ -0.21
TRAPPC9-215ENST00000524162 KRTAP26-1Q6PEX3 210 aa13.73□□□□□ -0.21
TRAPPC9-215ENST00000524162 Q8N1X5 172 aa13.73□□□□□ -0.21
TRAPPC9-215ENST00000524162 IGLV4-60A0A075B6I1 120 aa13.72□□□□□ -0.21
TRAPPC9-215ENST00000524162 ZNF25P17030 456 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-215ENST00000524162 UQCC3Q6UW78 93 aa13.72□□□□□ -0.21
TRAPPC9-215ENST00000524162 ATP5L2Q7Z4Y8 100 aa13.72□□□□□ -0.21
TRAPPC9-215ENST00000524162 A0A1B0GXF2 115 aa13.71□□□□□ -0.21
TRAPPC9-215ENST00000524162 GAS8-AS1O95177 125 aa13.71□□□□□ -0.21
TRAPPC9-215ENST00000524162 ESDP10768 282 aa13.71□□□□□ -0.21
TRAPPC9-215ENST00000524162 RPS10P46783 165 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-215ENST00000524162 XGP55808 180 aa13.71□□□□□ -0.21
TRAPPC9-215ENST00000524162 IFITM2Q01629 132 aa13.71□□□□□ -0.21
TRAPPC9-215ENST00000524162 ANAPC16Q96DE5 110 aa13.71□□□□□ -0.21
TRAPPC9-215ENST00000524162 DNAH8Q96JB1 4490 aa13.71□□□□□ -0.22
TRAPPC9-215ENST00000524162 TRBV24-1A0A075B6N3 115 aa13.7□□□□□ -0.22
TRAPPC9-215ENST00000524162 F8W036 122 aa13.7□□□□□ -0.22
TRAPPC9-215ENST00000524162 VCYO14598 125 aa13.7□□□□□ -0.22
TRAPPC9-215ENST00000524162 LECT2O14960 151 aa13.7□□□□□ -0.22
TRAPPC9-215ENST00000524162 HBBP68871 147 aa13.7□□□□□ -0.22
TRAPPC9-215ENST00000524162 NRACQ8N912 160 aa13.7□□□□□ -0.22
TRAPPC9-215ENST00000524162 TSHBP01222 138 aa13.69□□□□□ -0.22
TRAPPC9-215ENST00000524162 MT-ND4LP03901 98 aa13.69□□□□□ -0.22
TRAPPC9-215ENST00000524162 SUMO2P61956 95 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-215ENST00000524162 RPL32P62910 135 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-215ENST00000524162 MRPL51Q4U2R6 128 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-215ENST00000524162 C20orf78Q9BR46 151 aa13.69□□□□□ -0.22
TRAPPC9-215ENST00000524162 CAMPP49913 170 aa13.68□□□□□ -0.22
TRAPPC9-215ENST00000524162 AMMECR1LQ6DCA0 310 aa13.68□□□□□ -0.22
TRAPPC9-215ENST00000524162 PPBPP02775 128 aa13.67□□□□□ -0.22
TRAPPC9-215ENST00000524162 FGF6P10767 208 aa13.67□□□□□ -0.22
TRAPPC9-215ENST00000524162 CLPSL2Q6UWE3 100 aa13.67□□□□□ -0.22
TRAPPC9-215ENST00000524162 Q6ZSA8 131 aa13.67□□□□□ -0.22
TRAPPC9-215ENST00000524162 MRPL52Q86TS9 123 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-215ENST00000524162 CLRN3Q8NCR9 226 aa13.67□□□□□ -0.22
TRAPPC9-215ENST00000524162 USP17L23D6RBM5 183 aa13.66□□□□□ -0.22
TRAPPC9-215ENST00000524162 PHOX2AO14813 284 aa13.66□□□□□ -0.22
TRAPPC9-215ENST00000524162 TCAPO15273 167 aa13.66□□□□□ -0.22
TRAPPC9-215ENST00000524162 DGAT2L7PQ6IED9 249 aa13.66□□□□□ -0.22
TRAPPC9-215ENST00000524162 DEFB104AQ8WTQ1 72 aa13.66□□□□□ -0.22
TRAPPC9-215ENST00000524162 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-215ENST00000524162 HLA-DQA1P01909 254 aa13.65□□□□□ -0.22
TRAPPC9-215ENST00000524162 KIR2DL4Q99706 377 aa13.65□□□□□ -0.22
TRAPPC9-215ENST00000524162 KRTAP17-1Q9BYP8 105 aa13.65□□□□□ -0.22
TRAPPC9-215ENST00000524162 TMEM242Q9NWH2 141 aa13.65□□□□□ -0.22
TRAPPC9-215ENST00000524162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-215ENST00000524162 IGKV2-29A2NJV5 120 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-215ENST00000524162 C7orf77A4D0Y5 90 aa13.64□□□□□ -0.23
TRAPPC9-215ENST00000524162 CKS2P33552 79 aa13.64□□□□□ -0.23
TRAPPC9-215ENST00000524162 SMAGPQ0VAQ4 97 aa13.64□□□□□ -0.23
TRAPPC9-215ENST00000524162 MRPL54Q6P161 138 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-215ENST00000524162 BTF3L4Q96K17 158 aa13.64□□□□□ -0.23
TRAPPC9-215ENST00000524162 CSDC2Q9Y534 153 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-215ENST00000524162 ABCA13Q86UQ4 5058 aa13.63□□□□□ -0.23
TRAPPC9-215ENST00000524162 SMKR1H3BMG3 65 aa13.63□□□□□ -0.23
TRAPPC9-215ENST00000524162 RNASEKQ6P5S7 137 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-215ENST00000524162 TMEM101Q96IK0 257 aa13.63□□□□□ -0.23
TRAPPC9-215ENST00000524162 IMMP2LQ96T52 175 aa13.63□□□□□ -0.23
TRAPPC9-215ENST00000524162 TMEM218A2RU14 115 aa13.62□□□□□ -0.23
TRAPPC9-215ENST00000524162 OR5A1Q8NGJ0 315 aa13.62□□□□□ -0.23
TRAPPC9-215ENST00000524162 KRTAP4-5Q9BYR2 181 aa13.62□□□□□ -0.23
TRAPPC9-215ENST00000524162 IGLV10-54A0A075B6I4 117 aa13.61□□□□□ -0.23
TRAPPC9-215ENST00000524162 PRSS1P07477 247 aa13.61□□□□□ -0.23
TRAPPC9-215ENST00000524162 FCER1GP30273 86 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms