RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 MGPP08493 103 aa8.55□□□□□ -1.04
VEGFA-225ENST00000523950 TMEM97Q5BJF2 176 aa8.55□□□□□ -1.04
VEGFA-225ENST00000523950 ATP5L2Q7Z4Y8 100 aa8.55□□□□□ -1.04
VEGFA-225ENST00000523950 NEXN-AS1Q8NBZ9 246 aa8.55□□□□□ -1.04
VEGFA-225ENST00000523950 Q9UF83 564 aa8.55□□□□□ -1.04
VEGFA-225ENST00000523950 HIGD1CA8MV81 97 aa8.54□□□□□ -1.04
VEGFA-225ENST00000523950 M0QY20 66 aa8.54□□□□□ -1.04
VEGFA-225ENST00000523950 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
VEGFA-225ENST00000523950 PGLYRP4Q96LB8 373 aa8.54□□□□□ -1.04
VEGFA-225ENST00000523950 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
VEGFA-225ENST00000523950 A0A1B0GUT8 65 aa8.53□□□□□ -1.04
VEGFA-225ENST00000523950 PDZD11Q5EBL8 140 aa8.53□□□□□ -1.04
VEGFA-225ENST00000523950 SUMO4Q6EEV6 95 aa8.53□□□□□ -1.04
VEGFA-225ENST00000523950 DAZ4Q86SG3 579 aaKnown RBP8.53□□□□□ -1.04
VEGFA-225ENST00000523950 MRPL52Q86TS9 123 aaKnown RBP8.53□□□□□ -1.04
VEGFA-225ENST00000523950 DAZ3Q9NR90 486 aaKnown RBP8.53□□□□□ -1.04
VEGFA-225ENST00000523950 NAT8BQ9UHF3 227 aa8.52□□□□□ -1.05
VEGFA-225ENST00000523950 TNFRSF18Q9Y5U5 241 aa8.52□□□□□ -1.05
VEGFA-225ENST00000523950 DDTP30046 118 aa8.51□□□□□ -1.05
VEGFA-225ENST00000523950 RIGQ13278 110 aa8.51□□□□□ -1.05
VEGFA-225ENST00000523950 NUP35Q8NFH5 326 aa8.51□□□□□ -1.05
VEGFA-225ENST00000523950 CHCHD7Q9BUK0 85 aa8.51□□□□□ -1.05
VEGFA-225ENST00000523950 DNAH2Q9P225 4427 aa8.51□□□□□ -1.05
VEGFA-225ENST00000523950 TRBV6-8A0A0A6YYG3 113 aa8.5□□□□□ -1.05
VEGFA-225ENST00000523950 A0A1B0GVY2 172 aa8.5□□□□□ -1.05
VEGFA-225ENST00000523950 IBA57-AS1B1ANH7 110 aa8.5□□□□□ -1.05
VEGFA-225ENST00000523950 RAB4AP20338 218 aa8.5□□□□□ -1.05
VEGFA-225ENST00000523950 LAGE3Q14657 143 aa8.5□□□□□ -1.05
VEGFA-225ENST00000523950 TMEM191AQ9H0A3 160 aa8.5□□□□□ -1.05
VEGFA-225ENST00000523950 Q6ZRN7 208 aaPredicted RBP8.49□□□□□ -1.05
VEGFA-225ENST00000523950 TMEM136Q6ZRR5 245 aa8.49□□□□□ -1.05
VEGFA-225ENST00000523950 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
VEGFA-225ENST00000523950 DNAH17Q9UFH2 4485 aa8.49□□□□□ -1.05
VEGFA-225ENST00000523950 EPPK1P58107 5090 aaKnown RBP8.48□□□□□ -1.05
VEGFA-225ENST00000523950 A0A1B0GW15 77 aa8.48□□□□□ -1.05
VEGFA-225ENST00000523950 TNP2Q05952 138 aa8.48□□□□□ -1.05
VEGFA-225ENST00000523950 NIT1Q86X76 327 aa8.48□□□□□ -1.05
VEGFA-225ENST00000523950 GATD1Q8NB37 220 aa8.48□□□□□ -1.05
VEGFA-225ENST00000523950 FAT2Q9NYQ8 4349 aa8.47□□□□□ -1.05
VEGFA-225ENST00000523950 TRBV25-1A0A075B6N4 114 aa8.47□□□□□ -1.05
VEGFA-225ENST00000523950 A0A087WX48 190 aa8.47□□□□□ -1.05
VEGFA-225ENST00000523950 IGHV3-30P01768 117 aa8.47□□□□□ -1.05
VEGFA-225ENST00000523950 IGHV3-33P01772 117 aa8.47□□□□□ -1.05
VEGFA-225ENST00000523950 APCSP02743 223 aa8.47□□□□□ -1.05
VEGFA-225ENST00000523950 IGHV3-30-3P0DP02 117 aa8.47□□□□□ -1.05
VEGFA-225ENST00000523950 IGHV3-30-5P0DP03 117 aa8.47□□□□□ -1.05
VEGFA-225ENST00000523950 IGHV1-24A0A0C4DH33 117 aa8.46□□□□□ -1.06
VEGFA-225ENST00000523950 MRAP2Q96G30 205 aa8.46□□□□□ -1.06
VEGFA-225ENST00000523950 TRAV8-3A0A0A6YYJ7 113 aa8.45□□□□□ -1.06
VEGFA-225ENST00000523950 TRBV6-5A0A0K0K1A5 114 aa8.45□□□□□ -1.06
VEGFA-225ENST00000523950 SERF1AO75920 110 aa8.45□□□□□ -1.06
VEGFA-225ENST00000523950 SCGB1D1O95968 90 aa8.45□□□□□ -1.06
VEGFA-225ENST00000523950 NTM-AS1Q6ZSK4 140 aa8.45□□□□□ -1.06
VEGFA-225ENST00000523950 C14orf144Q96I85 54 aa8.45□□□□□ -1.06
VEGFA-225ENST00000523950 HECTD4Q9Y4D8 3996 aa8.45□□□□□ -1.06
VEGFA-225ENST00000523950 TRAV26-2A0A0B4J265 109 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 A0A1B0GXF2 115 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 NCR2O95944 276 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 PPP1R17O96001 155 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 HBBP68871 147 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 COTL1Q14019 142 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 TEX43Q6ZNM6 134 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 ZNF664Q8N3J9 261 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 RNF185Q96GF1 192 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 C2orf88Q9BSF0 95 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 CHCHD5Q9BSY4 110 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 TM2D2Q9BX73 214 aa8.44□□□□□ -1.06
VEGFA-225ENST00000523950 TMEM262E9PQX1 116 aa8.43□□□□□ -1.06
VEGFA-225ENST00000523950 EREGO14944 169 aa8.43□□□□□ -1.06
VEGFA-225ENST00000523950 PMCHP20382 165 aa8.43□□□□□ -1.06
VEGFA-225ENST00000523950 CDPF1Q6NVV7 123 aa8.43□□□□□ -1.06
VEGFA-225ENST00000523950 AMN1Q8IY45 258 aa8.43□□□□□ -1.06
VEGFA-225ENST00000523950 RMI2Q96E14 147 aa8.43□□□□□ -1.06
VEGFA-225ENST00000523950 RPL39LQ96EH5 51 aaKnown RBP8.43□□□□□ -1.06
VEGFA-225ENST00000523950 COX11Q9Y6N1 276 aa8.43□□□□□ -1.06
VEGFA-225ENST00000523950 C20orf202A1L168 122 aa8.42□□□□□ -1.06
VEGFA-225ENST00000523950 SDHAF1A6NFY7 115 aa8.42□□□□□ -1.06
VEGFA-225ENST00000523950 PSCAO43653 123 aa8.42□□□□□ -1.06
VEGFA-225ENST00000523950 CAMPP49913 170 aa8.42□□□□□ -1.06
VEGFA-225ENST00000523950 PMCHL1Q16048 86 aa8.42□□□□□ -1.06
VEGFA-225ENST00000523950 FAM104BQ5XKR9 115 aa8.42□□□□□ -1.06
VEGFA-225ENST00000523950 Q8N3U1 123 aa8.42□□□□□ -1.06
VEGFA-225ENST00000523950 CHCHD1Q96BP2 118 aaKnown RBP8.42□□□□□ -1.06
VEGFA-225ENST00000523950 TMEM243Q9BU79 118 aa8.42□□□□□ -1.06
VEGFA-225ENST00000523950 Q9HAA7 133 aa8.42□□□□□ -1.06
VEGFA-225ENST00000523950 BIRC6Q9NR09 4857 aa8.42□□□□□ -1.06
VEGFA-225ENST00000523950 I3L3M4 83 aa8.41□□□□□ -1.06
VEGFA-225ENST00000523950 AMTP48728 403 aa8.41□□□□□ -1.06
VEGFA-225ENST00000523950 LINC00310P59036 64 aa8.41□□□□□ -1.06
VEGFA-225ENST00000523950 MPV17L2Q567V2 206 aa8.41□□□□□ -1.06
VEGFA-225ENST00000523950 MRPL54Q6P161 138 aaKnown RBP8.41□□□□□ -1.06
VEGFA-225ENST00000523950 VAMP8Q9BV40 100 aa8.41□□□□□ -1.06
VEGFA-225ENST00000523950 ST20Q9HBF5 79 aa8.41□□□□□ -1.06
VEGFA-225ENST00000523950 KLK12Q9UKR0 248 aa8.41□□□□□ -1.06
VEGFA-225ENST00000523950 A0A087WTM6 91 aa8.4□□□□□ -1.06
VEGFA-225ENST00000523950 H7C423 109 aa8.4□□□□□ -1.06
VEGFA-225ENST00000523950 CRPP02741 224 aa8.4□□□□□ -1.06
VEGFA-225ENST00000523950 C18orf32Q8TCD1 76 aa8.4□□□□□ -1.06
VEGFA-225ENST00000523950 TMEM70Q9BUB7 260 aa8.4□□□□□ -1.06
VEGFA-225ENST00000523950 PRO1933Q9H354 126 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms