RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 IGHV3-66A0A0C4DH42 116 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 TMEM223A0PJW6 202 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 C11orf86A6NJI1 115 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 BUB3O43684 328 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 PSMB8P28062 276 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 Q1RN00 199 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 SERP2Q8N6R1 65 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 FAM19A4Q96LR4 140 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 SLC50A1Q9BRV3 221 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 UPK3BQ9BT76 320 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 SMIM2Q9BVW6 85 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 SETXQ7Z333 2677 aaKnown RBP5.5□□□□□ -1.53
HDAC9-227ENST00000523867 IGKV3D-20A0A0C4DH25 116 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 ECSCRQ19T08 205 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 KLHL30-AS1Q8NEE0 82 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 CSMD1Q96PZ7 3565 aa5.5□□□□□ -1.53
HDAC9-227ENST00000523867 IGHV4-4A0A075B6R2 117 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 IGHV3OR16-13A0A075B7E8 117 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 IGHV3-74A0A0B4J1X5 117 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 A0A0J9YX75 114 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 F5H697 171 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 LST1O00453 97 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 TRIAP1O43715 76 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 EIF4EBP3O60516 100 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-227ENST00000523867 TRGV3P03979 118 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 RPL18AQ02543 176 aaKnown RBP5.49□□□□□ -1.53
HDAC9-227ENST00000523867 MINOS1Q5TGZ0 78 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 Q6ZS46 218 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 Q8N9W7 124 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 MINOS1-NBL1R4GNA1 71 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 PTPRQQ9UMZ3 2332 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 TRAV26-2A0A0B4J265 109 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 IGHV1-69DA0A0B4J2H0 117 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 EPM2AB3EWF7 344 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 AMELXQ99217 191 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 KLK15Q9H2R5 256 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 DPH3P1Q9H4G8 78 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 C11orf21Q9P2W6 132 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 U3KQE9 123 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 WNK2Q9Y3S1 2297 aa5.49□□□□□ -1.53
HDAC9-227ENST00000523867 CYSRT1A8MQ03 144 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 PFN2P35080 140 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 SPANXN1Q5VSR9 72 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 CLEC19AQ6UXS0 136 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 PRIMA1Q86XR5 153 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 DCANP1Q8TF63 244 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 ICOSQ9Y6W8 199 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 ANKHD1Q8IWZ3 2542 aaKnown RBP5.48□□□□□ -1.53
HDAC9-227ENST00000523867 IGHV3-49A0A0A0MS15 119 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 SDHAF1A6NFY7 115 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 F6UB75 175 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 J3QQQ9 107 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 NDUFC2O95298 119 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 FBXL19-AS1Q494R0 122 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 DAND5Q8N907 189 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 SMCR5Q8TEV8 140 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 TENM4Q6N022 2769 aa5.48□□□□□ -1.53
HDAC9-227ENST00000523867 SPTBN1Q01082 2364 aaKnown RBP5.48□□□□□ -1.53
HDAC9-227ENST00000523867 COL6A6A6NMZ7 2263 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 IGHV7-4-1A0A0J9YVY3 117 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 CLPSL1A2RUU4 121 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 CCL21O00585 134 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 ATP6V0E1O15342 81 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 SAA4P35542 130 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 DSCR8Q96T75 97 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 MYO18BQ8IUG5 2567 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 IGLV4-69A0A075B6H9 119 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 TRBV7-1A0A0A6YYK4 115 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 LGALS3P17931 250 aaKnown RBP5.47□□□□□ -1.53
HDAC9-227ENST00000523867 ZFP36P26651 326 aaKnown RBP5.47□□□□□ -1.53
HDAC9-227ENST00000523867 MUSTN1Q8IVN3 82 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 C1orf158Q8N1D5 194 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 ZNF462Q96JM2 2506 aa5.47□□□□□ -1.53
HDAC9-227ENST00000523867 TRAV41A0A0B4J266 112 aa5.46□□□□□ -1.53
HDAC9-227ENST00000523867 G3V318 75 aa5.46□□□□□ -1.53
HDAC9-227ENST00000523867 H7C2G1 150 aa5.46□□□□□ -1.53
HDAC9-227ENST00000523867 PPP1R17O96001 155 aa5.46□□□□□ -1.53
HDAC9-227ENST00000523867 C2orf66Q6UXQ4 117 aa5.46□□□□□ -1.53
HDAC9-227ENST00000523867 TMEM141Q96I45 108 aa5.46□□□□□ -1.53
HDAC9-227ENST00000523867 LEPROTO15243 131 aa5.46□□□□□ -1.54
HDAC9-227ENST00000523867 C11orf71Q6IPW1 123 aa5.46□□□□□ -1.54
HDAC9-227ENST00000523867 C9orf47Q6ZRZ4 202 aa5.46□□□□□ -1.54
HDAC9-227ENST00000523867 UBR5O95071 2799 aaPredicted RBP5.46□□□□□ -1.54
HDAC9-227ENST00000523867 TRAV12-2A0A075B6T6 113 aa5.45□□□□□ -1.54
HDAC9-227ENST00000523867 M0R381 172 aa5.45□□□□□ -1.54
HDAC9-227ENST00000523867 SUMO2P61956 95 aaKnown RBP5.45□□□□□ -1.54
HDAC9-227ENST00000523867 TIMM21Q9BVV7 248 aa5.45□□□□□ -1.54
HDAC9-227ENST00000523867 MAP1AP78559 2803 aaPredicted RBP5.45□□□□□ -1.54
HDAC9-227ENST00000523867 TSPEAR-AS2P59090 65 aa5.45□□□□□ -1.54
HDAC9-227ENST00000523867 NPC2P61916 151 aa5.45□□□□□ -1.54
HDAC9-227ENST00000523867 KLK9Q2XQG4 91 aa5.45□□□□□ -1.54
HDAC9-227ENST00000523867 CYSTM1Q9H1C7 97 aa5.45□□□□□ -1.54
HDAC9-227ENST00000523867 KLK9Q9UKQ9 250 aa5.45□□□□□ -1.54
HDAC9-227ENST00000523867 SERP1Q9Y6X1 66 aa5.45□□□□□ -1.54
HDAC9-227ENST00000523867 CFAP46Q8IYW2 2715 aa5.45□□□□□ -1.54
HDAC9-227ENST00000523867 MED13LQ71F56 2210 aa5.45□□□□□ -1.54
HDAC9-227ENST00000523867 C14orf178Q8N769 122 aaPredicted RBP5.44□□□□□ -1.54
HDAC9-227ENST00000523867 COL12A1Q99715 3063 aa5.44□□□□□ -1.54
HDAC9-227ENST00000523867 FLNBO75369 2602 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms