RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 DNAL4O96015 105 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 BAALC-AS2P0C853 105 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 INAFM2P0DMQ5 153 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 LYPD5Q6UWN5 251 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 MRAPQ8TCY5 172 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 DPH3Q96FX2 82 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 M0R1W7 72 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 OXTP01178 125 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 MRPS36P82909 103 aaKnown RBP6.22□□□□□ -1.41
CSMD1-213ENST00000523488 CIRBPQ14011 172 aaKnown RBP6.22□□□□□ -1.41
CSMD1-213ENST00000523488 ECSCRQ19T08 205 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 IGHV3-30-3P0DP02 117 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 SYNJ2BPP57105 145 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 ZNF415Q09FC8 603 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 PIMREGQ9BSJ6 248 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 DPM3Q9P2X0 92 aa6.22□□□□□ -1.41
CSMD1-213ENST00000523488 DAZ2Q13117 558 aaKnown RBP6.21□□□□□ -1.41
CSMD1-213ENST00000523488 CLEC19AQ6UXS0 136 aa6.21□□□□□ -1.41
CSMD1-213ENST00000523488 DAZ4Q86SG3 579 aaKnown RBP6.21□□□□□ -1.41
CSMD1-213ENST00000523488 DAZ1Q9NQZ3 744 aaKnown RBP6.21□□□□□ -1.41
CSMD1-213ENST00000523488 DAZ3Q9NR90 486 aaKnown RBP6.21□□□□□ -1.41
CSMD1-213ENST00000523488 IGKV3-7A0A075B6H7 116 aa6.21□□□□□ -1.42
CSMD1-213ENST00000523488 IGHV3OR16-10A0A075B7F0 116 aa6.21□□□□□ -1.42
CSMD1-213ENST00000523488 IGKV3D-7A0A0C4DH55 119 aa6.21□□□□□ -1.42
CSMD1-213ENST00000523488 A0A0U1RRA0 63 aa6.21□□□□□ -1.42
CSMD1-213ENST00000523488 BCE1O60756 84 aa6.21□□□□□ -1.42
CSMD1-213ENST00000523488 PRR9Q5T870 116 aa6.21□□□□□ -1.42
CSMD1-213ENST00000523488 C2CD3Q4AC94 2353 aa6.21□□□□□ -1.42
CSMD1-213ENST00000523488 DMDP11532 3685 aa6.21□□□□□ -1.42
CSMD1-213ENST00000523488 RNASE3P12724 160 aaKnown RBP6.21□□□□□ -1.42
CSMD1-213ENST00000523488 PSMB8P28062 276 aa6.21□□□□□ -1.42
CSMD1-213ENST00000523488 C15orf32Q32M92 178 aa6.21□□□□□ -1.42
CSMD1-213ENST00000523488 LINC00477Q96M19 166 aa6.21□□□□□ -1.42
CSMD1-213ENST00000523488 NAV2Q8IVL1 2488 aa6.2□□□□□ -1.42
CSMD1-213ENST00000523488 LY6HO94772 140 aa6.2□□□□□ -1.42
CSMD1-213ENST00000523488 IGF1P05019 195 aa6.2□□□□□ -1.42
CSMD1-213ENST00000523488 CD28P10747 220 aa6.2□□□□□ -1.42
CSMD1-213ENST00000523488 NDPQ00604 133 aa6.2□□□□□ -1.42
CSMD1-213ENST00000523488 SUMO4Q6EEV6 95 aa6.2□□□□□ -1.42
CSMD1-213ENST00000523488 TMEM61Q8N0U2 210 aa6.2□□□□□ -1.42
CSMD1-213ENST00000523488 RPL18AQ02543 176 aaKnown RBP6.2□□□□□ -1.42
CSMD1-213ENST00000523488 MIAQ16674 131 aa6.2□□□□□ -1.42
CSMD1-213ENST00000523488 ZNF580Q9UK33 172 aa6.2□□□□□ -1.42
CSMD1-213ENST00000523488 TRBV7-1A0A0A6YYK4 115 aa6.2□□□□□ -1.42
CSMD1-213ENST00000523488 SERP2Q8N6R1 65 aa6.2□□□□□ -1.42
CSMD1-213ENST00000523488 FASNP49327 2511 aaKnown RBP6.19□□□□□ -1.42
CSMD1-213ENST00000523488 C10orf105Q8TEF2 133 aa6.19□□□□□ -1.42
CSMD1-213ENST00000523488 JPT2Q9H910 190 aa6.19□□□□□ -1.42
CSMD1-213ENST00000523488 JMJD1CQ15652 2540 aa6.19□□□□□ -1.42
CSMD1-213ENST00000523488 ZZEF1O43149 2961 aa6.18□□□□□ -1.42
CSMD1-213ENST00000523488 KLLNB2CW77 178 aa6.18□□□□□ -1.42
CSMD1-213ENST00000523488 TIRAPP58753 221 aa6.18□□□□□ -1.42
CSMD1-213ENST00000523488 ADAMTSL4-AS1Q5T5F5 129 aa6.18□□□□□ -1.42
CSMD1-213ENST00000523488 C9orf139Q6ZV77 190 aa6.18□□□□□ -1.42
CSMD1-213ENST00000523488 C9orf85Q96MD7 179 aa6.18□□□□□ -1.42
CSMD1-213ENST00000523488 UCNP55089 124 aa6.18□□□□□ -1.42
CSMD1-213ENST00000523488 COX7A2LO14548 114 aa6.17□□□□□ -1.42
CSMD1-213ENST00000523488 ABCA12Q86UK0 2595 aa6.17□□□□□ -1.42
CSMD1-213ENST00000523488 SORL1Q92673 2214 aa6.17□□□□□ -1.42
CSMD1-213ENST00000523488 BSPH1Q075Z2 132 aa6.17□□□□□ -1.42
CSMD1-213ENST00000523488 PRO3102Q9H379 93 aa6.17□□□□□ -1.42
CSMD1-213ENST00000523488 CFAP47Q6ZTR5 3102 aa6.17□□□□□ -1.42
CSMD1-213ENST00000523488 PIK3CD-AS1Q5SR53 167 aa6.17□□□□□ -1.42
CSMD1-213ENST00000523488 MUC4Q99102 2169 aa6.17□□□□□ -1.42
CSMD1-213ENST00000523488 IGHV1-58A0A0C4DH39 117 aa6.16□□□□□ -1.42
CSMD1-213ENST00000523488 DEFB1P60022 68 aa6.16□□□□□ -1.42
CSMD1-213ENST00000523488 RNASE13Q5GAN3 156 aaKnown RBP6.16□□□□□ -1.42
CSMD1-213ENST00000523488 ZNF625Q96I27 306 aaPredicted RBP6.16□□□□□ -1.42
CSMD1-213ENST00000523488 LINC00167Q96N53 147 aa6.16□□□□□ -1.42
CSMD1-213ENST00000523488 PKIGQ9Y2B9 76 aa6.16□□□□□ -1.42
CSMD1-213ENST00000523488 Q6JHZ5 121 aa6.16□□□□□ -1.42
CSMD1-213ENST00000523488 FAM110DQ8TAY7 271 aaPredicted RBP6.16□□□□□ -1.42
CSMD1-213ENST00000523488 COPS9Q8WXC6 57 aa6.16□□□□□ -1.42
CSMD1-213ENST00000523488 RNASE6Q93091 150 aaKnown RBP6.16□□□□□ -1.42
CSMD1-213ENST00000523488 CYSTM1Q9H1C7 97 aa6.16□□□□□ -1.42
CSMD1-213ENST00000523488 MTORP42345 2549 aa6.16□□□□□ -1.42
CSMD1-213ENST00000523488 VMO1Q7Z5L0 202 aa6.16□□□□□ -1.42
CSMD1-213ENST00000523488 C20orf203Q8NBC4 194 aa6.16□□□□□ -1.42
CSMD1-213ENST00000523488 PLA2G2CQ5R387 149 aa6.15□□□□□ -1.42
CSMD1-213ENST00000523488 FAM215AQ9Y5M1 114 aa6.15□□□□□ -1.42
CSMD1-213ENST00000523488 A8MZ25 164 aa6.15□□□□□ -1.42
CSMD1-213ENST00000523488 USP17L23D6RBM5 183 aa6.15□□□□□ -1.42
CSMD1-213ENST00000523488 PFN2P35080 140 aa6.15□□□□□ -1.42
CSMD1-213ENST00000523488 TMEM243Q9BU79 118 aa6.15□□□□□ -1.42
CSMD1-213ENST00000523488 LOC400499M0QZD8 3231 aa6.15□□□□□ -1.43
CSMD1-213ENST00000523488 IGLV5-39A0A0G2JS06 123 aa6.15□□□□□ -1.43
CSMD1-213ENST00000523488 TINCRA0A1B0GVN0 87 aa6.15□□□□□ -1.43
CSMD1-213ENST00000523488 A8MTW9 85 aa6.15□□□□□ -1.43
CSMD1-213ENST00000523488 DGAT2L7PQ6IED9 249 aa6.15□□□□□ -1.43
CSMD1-213ENST00000523488 IGLV4-3A0A075B6K6 122 aa6.14□□□□□ -1.43
CSMD1-213ENST00000523488 A0A087WVE0 104 aa6.14□□□□□ -1.43
CSMD1-213ENST00000523488 F6UB75 175 aa6.14□□□□□ -1.43
CSMD1-213ENST00000523488 C16orf95Q9H693 158 aa6.14□□□□□ -1.43
CSMD1-213ENST00000523488 HIVEP2P31629 2446 aa6.14□□□□□ -1.43
CSMD1-213ENST00000523488 C22orf34Q6ZV56 151 aa6.14□□□□□ -1.43
CSMD1-213ENST00000523488 F8WDY8 70 aa6.14□□□□□ -1.43
CSMD1-213ENST00000523488 HOXD3P31249 432 aaPredicted RBP6.14□□□□□ -1.43
CSMD1-213ENST00000523488 IGFL3Q6UXB1 125 aa6.14□□□□□ -1.43
CSMD1-213ENST00000523488 PRIMA1Q86XR5 153 aa6.14□□□□□ -1.43
CSMD1-213ENST00000523488 CCDC140Q96MF4 163 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms