RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 PLAC8Q9NZF1 115 aa9.63□□□□□ -0.87
TRAPPC9-213ENST00000522504 RNF185Q96GF1 192 aa9.62□□□□□ -0.87
TRAPPC9-213ENST00000522504 TRAV8-4A0A0B4J246 113 aa9.61□□□□□ -0.87
TRAPPC9-213ENST00000522504 P01737 135 aa9.61□□□□□ -0.87
TRAPPC9-213ENST00000522504 SMIM17P0DL12 118 aa9.61□□□□□ -0.87
TRAPPC9-213ENST00000522504 GZMBP10144 247 aa9.61□□□□□ -0.87
TRAPPC9-213ENST00000522504 SUMO4Q6EEV6 95 aa9.61□□□□□ -0.87
TRAPPC9-213ENST00000522504 AP1S3Q96PC3 154 aa9.61□□□□□ -0.87
TRAPPC9-213ENST00000522504 A0A1B0GUV1 79 aa9.6□□□□□ -0.87
TRAPPC9-213ENST00000522504 S100A9P06702 114 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-213ENST00000522504 MGPP08493 103 aa9.6□□□□□ -0.87
TRAPPC9-213ENST00000522504 C15orf56Q8N910 161 aa9.6□□□□□ -0.87
TRAPPC9-213ENST00000522504 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
TRAPPC9-213ENST00000522504 AP5S1Q9NUS5 200 aa9.6□□□□□ -0.87
TRAPPC9-213ENST00000522504 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-213ENST00000522504 PDE6DO43924 150 aa9.59□□□□□ -0.87
TRAPPC9-213ENST00000522504 COX6A2Q02221 97 aa9.59□□□□□ -0.87
TRAPPC9-213ENST00000522504 TMEM243Q9BU79 118 aa9.59□□□□□ -0.87
TRAPPC9-213ENST00000522504 LPAP08519 4548 aa9.59□□□□□ -0.87
TRAPPC9-213ENST00000522504 RAB19A4D1S5 217 aa9.58□□□□□ -0.88
TRAPPC9-213ENST00000522504 SRSF3P84103 164 aaKnown RBP9.58□□□□□ -0.88
TRAPPC9-213ENST00000522504 PEA15Q15121 130 aa9.58□□□□□ -0.88
TRAPPC9-213ENST00000522504 COMMD7Q86VX2 200 aa9.58□□□□□ -0.88
TRAPPC9-213ENST00000522504 PRSS3P2Q8NHM4 247 aa9.58□□□□□ -0.88
TRAPPC9-213ENST00000522504 C11orf52Q96A22 123 aa9.58□□□□□ -0.88
TRAPPC9-213ENST00000522504 TPPP3Q9BW30 176 aa9.58□□□□□ -0.88
TRAPPC9-213ENST00000522504 MED9Q9NWA0 146 aa9.58□□□□□ -0.88
TRAPPC9-213ENST00000522504 LINC00862A6NCI5 91 aa9.57□□□□□ -0.88
TRAPPC9-213ENST00000522504 SRP19P09132 144 aaKnown RBP9.57□□□□□ -0.88
TRAPPC9-213ENST00000522504 IGLC6P0CF74 106 aa9.57□□□□□ -0.88
TRAPPC9-213ENST00000522504 CEBPGP53567 150 aa9.57□□□□□ -0.88
TRAPPC9-213ENST00000522504 PRR3P79522 188 aaKnown RBP9.57□□□□□ -0.88
TRAPPC9-213ENST00000522504 GAGE12HA6NDE8 117 aa9.56□□□□□ -0.88
TRAPPC9-213ENST00000522504 TMEM250H0YL14 139 aa9.56□□□□□ -0.88
TRAPPC9-213ENST00000522504 RPL35P42766 123 aaKnown RBP9.56□□□□□ -0.88
TRAPPC9-213ENST00000522504 HIGD2BQ4VC39 106 aa9.56□□□□□ -0.88
TRAPPC9-213ENST00000522504 C7orf33Q8WU49 177 aa9.56□□□□□ -0.88
TRAPPC9-213ENST00000522504 GTSF1Q8WW33 167 aa9.56□□□□□ -0.88
TRAPPC9-213ENST00000522504 IGKV2-24A0A0C4DH68 120 aa9.55□□□□□ -0.88
TRAPPC9-213ENST00000522504 MAJINQ3KP22 176 aa9.55□□□□□ -0.88
TRAPPC9-213ENST00000522504 RASL11AQ6T310 242 aa9.55□□□□□ -0.88
TRAPPC9-213ENST00000522504 FER1L6-AS1Q8NA97 138 aa9.55□□□□□ -0.88
TRAPPC9-213ENST00000522504 DPH3P1Q9H4G8 78 aa9.55□□□□□ -0.88
TRAPPC9-213ENST00000522504 SMDT1Q9H4I9 107 aa9.55□□□□□ -0.88
TRAPPC9-213ENST00000522504 C9JQL5 133 aa9.54□□□□□ -0.88
TRAPPC9-213ENST00000522504 H7C1H1 209 aa9.54□□□□□ -0.88
TRAPPC9-213ENST00000522504 NDUFS6O75380 124 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-213ENST00000522504 RPS10P46783 165 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-213ENST00000522504 KRTAP10-8P60410 259 aa9.54□□□□□ -0.88
TRAPPC9-213ENST00000522504 PGLYRP4Q96LB8 373 aa9.54□□□□□ -0.88
TRAPPC9-213ENST00000522504 IGKV3OR2-268A0A0C4DH90 116 aa9.53□□□□□ -0.88
TRAPPC9-213ENST00000522504 UQCC3Q6UW78 93 aa9.53□□□□□ -0.88
TRAPPC9-213ENST00000522504 STPG4Q8N801 248 aa9.53□□□□□ -0.88
TRAPPC9-213ENST00000522504 OR2D3Q8NGH3 330 aa9.53□□□□□ -0.88
TRAPPC9-213ENST00000522504 NIT2Q9NQR4 276 aa9.53□□□□□ -0.88
TRAPPC9-213ENST00000522504 A0A096LNI7 61 aa9.52□□□□□ -0.89
TRAPPC9-213ENST00000522504 A0A0J9YXV3 536 aa9.52□□□□□ -0.89
TRAPPC9-213ENST00000522504 C19orf71A6NCJ1 209 aa9.52□□□□□ -0.89
TRAPPC9-213ENST00000522504 AMTP48728 403 aa9.52□□□□□ -0.89
TRAPPC9-213ENST00000522504 CENPWQ5EE01 88 aa9.52□□□□□ -0.89
TRAPPC9-213ENST00000522504 WDR73Q6P4I2 378 aa9.52□□□□□ -0.89
TRAPPC9-213ENST00000522504 SMIM7Q9BQ49 75 aa9.52□□□□□ -0.89
TRAPPC9-213ENST00000522504 ZNF727A8MUV8 499 aa9.51□□□□□ -0.89
TRAPPC9-213ENST00000522504 UBE2L6O14933 153 aa9.51□□□□□ -0.89
TRAPPC9-213ENST00000522504 GNG4P50150 75 aa9.51□□□□□ -0.89
TRAPPC9-213ENST00000522504 CACNG7P62955 275 aa9.51□□□□□ -0.89
TRAPPC9-213ENST00000522504 LYZL1Q6UWQ5 148 aa9.51□□□□□ -0.89
TRAPPC9-213ENST00000522504 CHCHD10Q8WYQ3 142 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC9-213ENST00000522504 TRBV20OR9-2A0A075B6H5 130 aa9.5□□□□□ -0.89
TRAPPC9-213ENST00000522504 COTL1Q14019 142 aa9.5□□□□□ -0.89
TRAPPC9-213ENST00000522504 CFAP161Q6P656 301 aa9.5□□□□□ -0.89
TRAPPC9-213ENST00000522504 GVQW2A0A096LPI5 108 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC9-213ENST00000522504 TRAV26-2A0A0B4J265 109 aa9.49□□□□□ -0.89
TRAPPC9-213ENST00000522504 NTF3P20783 257 aa9.49□□□□□ -0.89
TRAPPC9-213ENST00000522504 RPS20P60866 119 aaKnown RBP9.49□□□□□ -0.89
TRAPPC9-213ENST00000522504 FOXI1Q12951 378 aa9.48□□□□□ -0.89
TRAPPC9-213ENST00000522504 SRSF9Q13242 221 aaKnown RBP eCLIP9.48□□□□□ -0.89
TRAPPC9-213ENST00000522504 NDUFA5Q16718 116 aa9.48□□□□□ -0.89
TRAPPC9-213ENST00000522504 FAM74A3Q4VXF1 159 aa9.48□□□□□ -0.89
TRAPPC9-213ENST00000522504 SLC7A5P1Q8MH63 180 aa9.48□□□□□ -0.89
TRAPPC9-213ENST00000522504 GATD1Q8NB37 220 aa9.48□□□□□ -0.89
TRAPPC9-213ENST00000522504 LINC00526Q96FQ7 95 aa9.48□□□□□ -0.89
TRAPPC9-213ENST00000522504 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC9-213ENST00000522504 IGKV2-29A2NJV5 120 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC9-213ENST00000522504 TMEM218A2RU14 115 aa9.47□□□□□ -0.89
TRAPPC9-213ENST00000522504 F2Z2F3 143 aa9.47□□□□□ -0.89
TRAPPC9-213ENST00000522504 TRGC1P0CF51 173 aa9.47□□□□□ -0.89
TRAPPC9-213ENST00000522504 SPINK6Q6UWN8 80 aa9.47□□□□□ -0.89
TRAPPC9-213ENST00000522504 SMIM12Q96EX1 92 aa9.47□□□□□ -0.89
TRAPPC9-213ENST00000522504 NAT8Q9UHE5 227 aa9.47□□□□□ -0.89
TRAPPC9-213ENST00000522504 F8W036 122 aa9.46□□□□□ -0.9
TRAPPC9-213ENST00000522504 TMEM241Q24JQ0 296 aa9.46□□□□□ -0.9
TRAPPC9-213ENST00000522504 OCC1Q8TAD7 63 aa9.46□□□□□ -0.9
TRAPPC9-213ENST00000522504 RPL39LQ96EH5 51 aaKnown RBP9.46□□□□□ -0.9
TRAPPC9-213ENST00000522504 GAS8-AS1O95177 125 aa9.45□□□□□ -0.9
TRAPPC9-213ENST00000522504 ADCYAP1P18509 176 aa9.45□□□□□ -0.9
TRAPPC9-213ENST00000522504 CTRLP40313 264 aa9.45□□□□□ -0.9
TRAPPC9-213ENST00000522504 K7EN84 100 aa9.44□□□□□ -0.9
TRAPPC9-213ENST00000522504 FGF6P10767 208 aa9.44□□□□□ -0.9
TRAPPC9-213ENST00000522504 FOXA3P55318 350 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms