RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 GFRA4Q9GZZ7 299 aa13.32□□□□□ -0.28
PABPC1-218ENST00000521865 UBR4Q5T4S7 5183 aa13.31□□□□□ -0.28
PABPC1-218ENST00000521865 NTF3P20783 257 aa13.31□□□□□ -0.28
PABPC1-218ENST00000521865 COTL1Q14019 142 aa13.31□□□□□ -0.28
PABPC1-218ENST00000521865 SMIM12Q96EX1 92 aa13.31□□□□□ -0.28
PABPC1-218ENST00000521865 PGLYRP4Q96LB8 373 aa13.31□□□□□ -0.28
PABPC1-218ENST00000521865 MED9Q9NWA0 146 aa13.31□□□□□ -0.28
PABPC1-218ENST00000521865 IGKV3OR2-268A0A0C4DH90 116 aa13.3□□□□□ -0.28
PABPC1-218ENST00000521865 BIN3Q9NQY0 253 aa13.3□□□□□ -0.28
PABPC1-218ENST00000521865 TRAV1-1A0A0B4J248 108 aa13.29□□□□□ -0.28
PABPC1-218ENST00000521865 PDE6DO43924 150 aa13.29□□□□□ -0.28
PABPC1-218ENST00000521865 CHTF8P0CG12 524 aa13.29□□□□□ -0.28
PABPC1-218ENST00000521865 CIRBPQ14011 172 aaKnown RBP13.29□□□□□ -0.28
PABPC1-218ENST00000521865 MEF2BQ02080 365 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-218ENST00000521865 TWIST1Q15672 202 aa13.28□□□□□ -0.28
PABPC1-218ENST00000521865 EIF5AL1Q6IS14 154 aaKnown RBP13.28□□□□□ -0.28
PABPC1-218ENST00000521865 A0A087WYN8 130 aa13.27□□□□□ -0.29
PABPC1-218ENST00000521865 GAGE12HA6NDE8 117 aa13.27□□□□□ -0.29
PABPC1-218ENST00000521865 SLPIP03973 132 aa13.27□□□□□ -0.29
PABPC1-218ENST00000521865 Q6ZRU5 148 aa13.27□□□□□ -0.29
PABPC1-218ENST00000521865 RNF185Q96GF1 192 aa13.27□□□□□ -0.29
PABPC1-218ENST00000521865 CFAP161Q6P656 301 aa13.26□□□□□ -0.29
PABPC1-218ENST00000521865 TRBV20OR9-2A0A075B6H5 130 aa13.25□□□□□ -0.29
PABPC1-218ENST00000521865 AMMECR1LQ6DCA0 310 aa13.25□□□□□ -0.29
PABPC1-218ENST00000521865 C9orf62Q8N4C0 152 aa13.25□□□□□ -0.29
PABPC1-218ENST00000521865 NUDT10Q8NFP7 164 aa13.25□□□□□ -0.29
PABPC1-218ENST00000521865 SPACA4Q8TDM5 124 aa13.25□□□□□ -0.29
PABPC1-218ENST00000521865 NUDT11Q96G61 164 aa13.25□□□□□ -0.29
PABPC1-218ENST00000521865 TRAV26-2A0A0B4J265 109 aa13.24□□□□□ -0.29
PABPC1-218ENST00000521865 C7orf33Q8WU49 177 aa13.24□□□□□ -0.29
PABPC1-218ENST00000521865 CTRLP40313 264 aa13.23□□□□□ -0.29
PABPC1-218ENST00000521865 HIGD2BQ4VC39 106 aa13.23□□□□□ -0.29
PABPC1-218ENST00000521865 MT1HL1P0DM35 61 aa13.22□□□□□ -0.29
PABPC1-218ENST00000521865 BCL2P10415 239 aa13.22□□□□□ -0.29
PABPC1-218ENST00000521865 RPS10P46783 165 aaKnown RBP13.22□□□□□ -0.29
PABPC1-218ENST00000521865 COX6A2Q02221 97 aa13.22□□□□□ -0.29
PABPC1-218ENST00000521865 RNASEKQ6P5S7 137 aaKnown RBP13.22□□□□□ -0.29
PABPC1-218ENST00000521865 C15orf56Q8N910 161 aa13.22□□□□□ -0.29
PABPC1-218ENST00000521865 GATD1Q8NB37 220 aa13.22□□□□□ -0.29
PABPC1-218ENST00000521865 PHOX2AO14813 284 aa13.21□□□□□ -0.29
PABPC1-218ENST00000521865 SMIM15Q7Z3B0 74 aa13.21□□□□□ -0.29
PABPC1-218ENST00000521865 RPP21Q9H633 154 aaKnown RBP13.21□□□□□ -0.29
PABPC1-218ENST00000521865 IGKV2-24A0A0C4DH68 120 aa13.2□□□□□ -0.3
PABPC1-218ENST00000521865 MAJINQ3KP22 176 aa13.2□□□□□ -0.3
PABPC1-218ENST00000521865 CHCHD10Q8WYQ3 142 aaPredicted RBP13.2□□□□□ -0.3
PABPC1-218ENST00000521865 RNASE7Q9H1E1 156 aaKnown RBP13.2□□□□□ -0.3
PABPC1-218ENST00000521865 PLAC8Q9NZF1 115 aa13.2□□□□□ -0.3
PABPC1-218ENST00000521865 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.19□□□□□ -0.3
PABPC1-218ENST00000521865 IGKV2-29A2NJV5 120 aaPredicted RBP13.19□□□□□ -0.3
PABPC1-218ENST00000521865 NDUFS6O75380 124 aaKnown RBP13.19□□□□□ -0.3
PABPC1-218ENST00000521865 APCSP02743 223 aa13.19□□□□□ -0.3
PABPC1-218ENST00000521865 Q6ZNX1 250 aa13.19□□□□□ -0.3
PABPC1-218ENST00000521865 GTSF1Q8WW33 167 aa13.19□□□□□ -0.3
PABPC1-218ENST00000521865 RPL39LQ96EH5 51 aaKnown RBP13.19□□□□□ -0.3
PABPC1-218ENST00000521865 CNFNQ9BYD5 112 aa13.19□□□□□ -0.3
PABPC1-218ENST00000521865 NCR2O95944 276 aa13.18□□□□□ -0.3
PABPC1-218ENST00000521865 PRSS3P2Q8NHM4 247 aa13.17□□□□□ -0.3
PABPC1-218ENST00000521865 FGF6P10767 208 aa13.16□□□□□ -0.3
PABPC1-218ENST00000521865 TAGLN2P37802 199 aaKnown RBP13.16□□□□□ -0.3
PABPC1-218ENST00000521865 OCC1Q8TAD7 63 aa13.16□□□□□ -0.3
PABPC1-218ENST00000521865 SDHAF1A6NFY7 115 aa13.15□□□□□ -0.3
PABPC1-218ENST00000521865 H7C423 109 aa13.15□□□□□ -0.3
PABPC1-218ENST00000521865 K7EN84 100 aa13.15□□□□□ -0.3
PABPC1-218ENST00000521865 FOXA3P55318 350 aaPredicted RBP13.15□□□□□ -0.3
PABPC1-218ENST00000521865 TEX261Q6UWH6 196 aa13.15□□□□□ -0.3
PABPC1-218ENST00000521865 STPG4Q8N801 248 aa13.15□□□□□ -0.3
PABPC1-218ENST00000521865 LYPD6BQ8NI32 183 aa13.15□□□□□ -0.3
PABPC1-218ENST00000521865 BTF3L4Q96K17 158 aa13.15□□□□□ -0.3
PABPC1-218ENST00000521865 GVQW2A0A096LPI5 108 aaPredicted RBP13.14□□□□□ -0.31
PABPC1-218ENST00000521865 PMCHP20382 165 aa13.14□□□□□ -0.31
PABPC1-218ENST00000521865 TMEM101Q96IK0 257 aa13.14□□□□□ -0.31
PABPC1-218ENST00000521865 XCL1P47992 114 aa13.13□□□□□ -0.31
PABPC1-218ENST00000521865 SLC51BQ86UW2 128 aa13.13□□□□□ -0.31
PABPC1-218ENST00000521865 GATCO43716 136 aaKnown RBP13.12□□□□□ -0.31
PABPC1-218ENST00000521865 I3L3M4 83 aa13.11□□□□□ -0.31
PABPC1-218ENST00000521865 ZNF25P17030 456 aaPredicted RBP13.11□□□□□ -0.31
PABPC1-218ENST00000521865 FOXI1Q12951 378 aa13.11□□□□□ -0.31
PABPC1-218ENST00000521865 OR5A1Q8NGJ0 315 aa13.11□□□□□ -0.31
PABPC1-218ENST00000521865 A0A096LNI7 61 aa13.1□□□□□ -0.31
PABPC1-218ENST00000521865 PRR3P79522 188 aaKnown RBP13.1□□□□□ -0.31
PABPC1-218ENST00000521865 BORCS7Q96B45 105 aa13.1□□□□□ -0.31
PABPC1-218ENST00000521865 CCL25O15444 150 aa13.09□□□□□ -0.31
PABPC1-218ENST00000521865 PKIGQ9Y2B9 76 aa13.09□□□□□ -0.31
PABPC1-218ENST00000521865 A8MWL6 223 aa13.08□□□□□ -0.32
PABPC1-218ENST00000521865 CEBPGP53567 150 aa13.08□□□□□ -0.32
PABPC1-218ENST00000521865 LINC00526Q96FQ7 95 aa13.08□□□□□ -0.32
PABPC1-218ENST00000521865 LINC00474Q9P2X8 69 aa13.08□□□□□ -0.32
PABPC1-218ENST00000521865 IGHV1-58A0A0C4DH39 117 aa13.07□□□□□ -0.32
PABPC1-218ENST00000521865 LINC00959A0A1B0GUT2 108 aa13.07□□□□□ -0.32
PABPC1-218ENST00000521865 TCTE3Q8IZS6 198 aa13.07□□□□□ -0.32
PABPC1-218ENST00000521865 MRAP2Q96G30 205 aa13.07□□□□□ -0.32
PABPC1-218ENST00000521865 ST20Q9HBF5 79 aa13.07□□□□□ -0.32
PABPC1-218ENST00000521865 TMEM242Q9NWH2 141 aa13.07□□□□□ -0.32
PABPC1-218ENST00000521865 TRBV6-5A0A0K0K1A5 114 aa13.06□□□□□ -0.32
PABPC1-218ENST00000521865 FAM231BA6NCW3 169 aa13.06□□□□□ -0.32
PABPC1-218ENST00000521865 SS18Q15532 418 aa13.06□□□□□ -0.32
PABPC1-218ENST00000521865 CARD19Q96LW7 228 aa13.06□□□□□ -0.32
PABPC1-218ENST00000521865 TMEM250H0YL14 139 aa13.05□□□□□ -0.32
PABPC1-218ENST00000521865 ZNF561-AS1K7EIQ3 104 aa13.05□□□□□ -0.32
PABPC1-218ENST00000521865 FAM231DQ6ZW35 169 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms