RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 MAP1LC3CQ9BXW4 147 aa5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 MAP1LC3AQ9H492 121 aa5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 HSPB8Q9UJY1 196 aa5.11□□□□□ -1.59
CTNNA1-227ENST00000521387 A0A0J9YX75 114 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 A0A1B0GV90 55 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 PPBPP02775 128 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 IGLC3P0DOY3 106 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 RNASE3P12724 160 aaKnown RBP5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 ODF3L2Q3SX64 289 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 PSMG4Q5JS54 123 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 SPANXN1Q5VSR9 72 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 LINC01545Q5VT33 79 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 SAMD13Q5VXD3 122 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 NRACQ8N912 160 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 DEFB104AQ8WTQ1 72 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 PMCHL2Q9BQD1 86 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 CELA1Q9UNI1 258 aa5.1□□□□□ -1.59
CTNNA1-227ENST00000521387 TRAV26-2A0A0B4J265 109 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 TRAV12-3A0A0B4J271 114 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 hDV102S1A0JD36 115 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 C20orf202A1L168 122 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 C7orf71A4D174 169 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 PRSS47A8MTI9 375 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 H0Y8G0 127 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 M0R143 59 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 IGKV3-20P01619 116 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 HBDP02042 147 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 S100A4P26447 101 aaKnown RBP5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 LEPP41159 167 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 SMIM15Q7Z3B0 74 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 Q8N8P6 123 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 ODF3Q96PU9 254 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 CSTL1Q9H114 145 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 UQCR10Q9UDW1 63 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 LAMTOR2Q9Y2Q5 125 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 LPAP08519 4548 aa5.09□□□□□ -1.59
CTNNA1-227ENST00000521387 IGHV4-28A0A0C4DH34 117 aa5.08□□□□□ -1.6
CTNNA1-227ENST00000521387 M0R381 172 aa5.08□□□□□ -1.6
CTNNA1-227ENST00000521387 DUSP14O95147 198 aaKnown RBP5.08□□□□□ -1.6
CTNNA1-227ENST00000521387 FCER1GP30273 86 aa5.08□□□□□ -1.6
CTNNA1-227ENST00000521387 SNRPD3P62318 126 aaKnown RBP5.08□□□□□ -1.6
CTNNA1-227ENST00000521387 AMTNQ6UX39 209 aa5.08□□□□□ -1.6
CTNNA1-227ENST00000521387 ZNRF2Q8NHG8 242 aa5.08□□□□□ -1.6
CTNNA1-227ENST00000521387 IFI27L1Q96BM0 104 aa5.08□□□□□ -1.6
CTNNA1-227ENST00000521387 MRAP2Q96G30 205 aa5.08□□□□□ -1.6
CTNNA1-227ENST00000521387 DPH3P1Q9H4G8 78 aa5.08□□□□□ -1.6
CTNNA1-227ENST00000521387 NXT2Q9NPJ8 142 aaKnown RBP5.08□□□□□ -1.6
CTNNA1-227ENST00000521387 TRAV12-2A0A075B6T6 113 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 KNCNA6PVL3 124 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 NXPH4O95158 308 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 LINC00315P59091 139 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 SPINK13Q1W4C9 94 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 LBHQ53QV2 105 aaPredicted RBP5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 FAM159AQ6UWV7 190 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 Q6ZN92 141 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 MRPL52Q86TS9 123 aaKnown RBP5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 C14orf178Q8N769 122 aaPredicted RBP5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 RASL10AQ92737 203 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 KRTAP1-5Q9BYS1 174 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 JPT2Q9H910 190 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 PHLDA3Q9Y5J5 127 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 KIF25-AS1Q9Y6Z4 181 aa5.07□□□□□ -1.6
CTNNA1-227ENST00000521387 IGHV3-16A0A0C4DH30 117 aa5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 A8MTW9 85 aa5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 TCAPO15273 167 aa5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 MGPP08493 103 aa5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 MT1HL1P0DM35 61 aa5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 TSPOP30536 169 aa5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 HNRNPA3P51991 378 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 DEFB131AP59861 70 aa5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 KRTAP10-4P60372 401 aaPredicted RBP5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 FOXI2Q6ZQN5 318 aa5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 RPL39LQ96EH5 51 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 C9orf85Q96MD7 179 aa5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 ST20Q9HBF5 79 aa5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 TP73-AS1Q9UF72 201 aa5.06□□□□□ -1.6
CTNNA1-227ENST00000521387 IGHV1OR15-1A0A075B7D0 117 aa5.05□□□□□ -1.6
CTNNA1-227ENST00000521387 TRAV2A0A0B4J234 112 aa5.05□□□□□ -1.6
CTNNA1-227ENST00000521387 H3BMM0 161 aa5.05□□□□□ -1.6
CTNNA1-227ENST00000521387 CDKN1BP46527 198 aa5.05□□□□□ -1.6
CTNNA1-227ENST00000521387 NUTF2P61970 127 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-227ENST00000521387 LAGE3Q14657 143 aa5.05□□□□□ -1.6
CTNNA1-227ENST00000521387 ANKRD39Q53RE8 183 aa5.05□□□□□ -1.6
CTNNA1-227ENST00000521387 SMIM2Q9BVW6 85 aa5.05□□□□□ -1.6
CTNNA1-227ENST00000521387 DKK2Q9UBU2 259 aa5.05□□□□□ -1.6
CTNNA1-227ENST00000521387 MRPS16Q9Y3D3 137 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-227ENST00000521387 GOLT1BQ9Y3E0 138 aa5.05□□□□□ -1.6
CTNNA1-227ENST00000521387 HSBP1L1C9JCN9 74 aa5.04□□□□□ -1.6
CTNNA1-227ENST00000521387 SMIM17P0DL12 118 aa5.04□□□□□ -1.6
CTNNA1-227ENST00000521387 HLA-DRB4P13762 266 aa5.04□□□□□ -1.6
CTNNA1-227ENST00000521387 BATFQ16520 125 aa5.04□□□□□ -1.6
CTNNA1-227ENST00000521387 STPG4Q8N801 248 aa5.04□□□□□ -1.6
CTNNA1-227ENST00000521387 AP1S3Q96PC3 154 aa5.04□□□□□ -1.6
CTNNA1-227ENST00000521387 C20orf78Q9BR46 151 aa5.04□□□□□ -1.6
CTNNA1-227ENST00000521387 HLA-DRB4X5D2U9 266 aa5.04□□□□□ -1.6
CTNNA1-227ENST00000521387 X6R8D5 127 aa5.04□□□□□ -1.6
CTNNA1-227ENST00000521387 A0A087WWL8 130 aa5.03□□□□□ -1.6
CTNNA1-227ENST00000521387 TRAV25A0A0B4J276 109 aa5.03□□□□□ -1.6
CTNNA1-227ENST00000521387 PRSS1P07477 247 aa5.03□□□□□ -1.6
CTNNA1-227ENST00000521387 GIG44P09565 113 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms