RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 DPH3P1Q9H4G8 78 aa12.87□□□□□ -0.35
PABPC1-217ENST00000521067 IGHV3-64A0A075B6Q5 118 aa12.86□□□□□ -0.35
PABPC1-217ENST00000521067 IFNA1P01562 189 aa12.86□□□□□ -0.35
PABPC1-217ENST00000521067 SMIM12Q96EX1 92 aa12.86□□□□□ -0.35
PABPC1-217ENST00000521067 TRGC1P0CF51 173 aa12.85□□□□□ -0.35
PABPC1-217ENST00000521067 C15orf56Q8N910 161 aa12.85□□□□□ -0.35
PABPC1-217ENST00000521067 NUDT10Q8NFP7 164 aa12.85□□□□□ -0.35
PABPC1-217ENST00000521067 SPACA4Q8TDM5 124 aa12.85□□□□□ -0.35
PABPC1-217ENST00000521067 DPH3Q96FX2 82 aa12.85□□□□□ -0.35
PABPC1-217ENST00000521067 NUDT11Q96G61 164 aa12.85□□□□□ -0.35
PABPC1-217ENST00000521067 MED9Q9NWA0 146 aa12.85□□□□□ -0.35
PABPC1-217ENST00000521067 XKRY2A2RUG3 117 aa12.84□□□□□ -0.35
PABPC1-217ENST00000521067 MEF2BQ02080 365 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-217ENST00000521067 Q6ZRU5 148 aa12.84□□□□□ -0.35
PABPC1-217ENST00000521067 GATD1Q8NB37 220 aa12.84□□□□□ -0.35
PABPC1-217ENST00000521067 AP5S1Q9NUS5 200 aa12.84□□□□□ -0.35
PABPC1-217ENST00000521067 TRAV26-2A0A0B4J265 109 aa12.83□□□□□ -0.36
PABPC1-217ENST00000521067 GAGE12HA6NDE8 117 aa12.83□□□□□ -0.36
PABPC1-217ENST00000521067 CTRLP40313 264 aa12.83□□□□□ -0.36
PABPC1-217ENST00000521067 AMTP48728 403 aa12.83□□□□□ -0.36
PABPC1-217ENST00000521067 SULT1A2P50226 295 aa12.83□□□□□ -0.36
PABPC1-217ENST00000521067 COTL1Q14019 142 aa12.83□□□□□ -0.36
PABPC1-217ENST00000521067 WDR73Q6P4I2 378 aa12.83□□□□□ -0.36
PABPC1-217ENST00000521067 LRP2P98164 4655 aa12.83□□□□□ -0.36
PABPC1-217ENST00000521067 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-217ENST00000521067 UBE2L6O14933 153 aa12.82□□□□□ -0.36
PABPC1-217ENST00000521067 PDE6DO43924 150 aa12.82□□□□□ -0.36
PABPC1-217ENST00000521067 RNF185Q96GF1 192 aa12.82□□□□□ -0.36
PABPC1-217ENST00000521067 CNFNQ9BYD5 112 aa12.82□□□□□ -0.36
PABPC1-217ENST00000521067 FOXA3P55318 350 aaPredicted RBP12.81□□□□□ -0.36
PABPC1-217ENST00000521067 TWIST1Q15672 202 aa12.81□□□□□ -0.36
PABPC1-217ENST00000521067 PLAC8Q9NZF1 115 aa12.81□□□□□ -0.36
PABPC1-217ENST00000521067 IGKV3OR2-268A0A0C4DH90 116 aa12.8□□□□□ -0.36
PABPC1-217ENST00000521067 COX6A2Q02221 97 aa12.8□□□□□ -0.36
PABPC1-217ENST00000521067 Q6ZNX1 250 aa12.8□□□□□ -0.36
PABPC1-217ENST00000521067 K7EN84 100 aa12.79□□□□□ -0.36
PABPC1-217ENST00000521067 PHOX2AO14813 284 aa12.79□□□□□ -0.36
PABPC1-217ENST00000521067 BCL2P10415 239 aa12.79□□□□□ -0.36
PABPC1-217ENST00000521067 HIGD2BQ4VC39 106 aa12.79□□□□□ -0.36
PABPC1-217ENST00000521067 PRSS3P2Q8NHM4 247 aa12.79□□□□□ -0.36
PABPC1-217ENST00000521067 RPL39LQ96EH5 51 aaKnown RBP12.79□□□□□ -0.36
PABPC1-217ENST00000521067 RNASE7Q9H1E1 156 aaKnown RBP12.79□□□□□ -0.36
PABPC1-217ENST00000521067 TEX46H3BTG2 121 aa12.78□□□□□ -0.36
PABPC1-217ENST00000521067 OCC1Q8TAD7 63 aa12.78□□□□□ -0.36
PABPC1-217ENST00000521067 GTSF1Q8WW33 167 aa12.78□□□□□ -0.36
PABPC1-217ENST00000521067 BIN3Q9NQY0 253 aa12.78□□□□□ -0.36
PABPC1-217ENST00000521067 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-217ENST00000521067 IGKV2-29A2NJV5 120 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-217ENST00000521067 RPS10P46783 165 aaKnown RBP12.77□□□□□ -0.37
PABPC1-217ENST00000521067 EIF5AL1Q6IS14 154 aaKnown RBP12.77□□□□□ -0.37
PABPC1-217ENST00000521067 CFAP161Q6P656 301 aa12.76□□□□□ -0.37
PABPC1-217ENST00000521067 CHCHD10Q8WYQ3 142 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-217ENST00000521067 RPP21Q9H633 154 aaKnown RBP12.76□□□□□ -0.37
PABPC1-217ENST00000521067 RNF213Q63HN8 5207 aa12.75□□□□□ -0.37
PABPC1-217ENST00000521067 MAJINQ3KP22 176 aa12.74□□□□□ -0.37
PABPC1-217ENST00000521067 IGKV2-24A0A0C4DH68 120 aa12.73□□□□□ -0.37
PABPC1-217ENST00000521067 FAM231BA6NCW3 169 aa12.73□□□□□ -0.37
PABPC1-217ENST00000521067 NDUFS6O75380 124 aaKnown RBP12.73□□□□□ -0.37
PABPC1-217ENST00000521067 FGF6P10767 208 aa12.73□□□□□ -0.37
PABPC1-217ENST00000521067 AMMECR1LQ6DCA0 310 aa12.73□□□□□ -0.37
PABPC1-217ENST00000521067 RNASEKQ6P5S7 137 aaKnown RBP12.73□□□□□ -0.37
PABPC1-217ENST00000521067 GVQW2A0A096LPI5 108 aaPredicted RBP12.72□□□□□ -0.37
PABPC1-217ENST00000521067 SDHAF1A6NFY7 115 aa12.72□□□□□ -0.37
PABPC1-217ENST00000521067 GAS8-AS1O95177 125 aa12.72□□□□□ -0.37
PABPC1-217ENST00000521067 NCR2O95944 276 aa12.72□□□□□ -0.37
PABPC1-217ENST00000521067 FOXI1Q12951 378 aa12.72□□□□□ -0.37
PABPC1-217ENST00000521067 A0A096LNI7 61 aa12.7□□□□□ -0.38
PABPC1-217ENST00000521067 H7C423 109 aa12.7□□□□□ -0.38
PABPC1-217ENST00000521067 APCSP02743 223 aa12.7□□□□□ -0.38
PABPC1-217ENST00000521067 ODF1Q14990 250 aa12.7□□□□□ -0.38
PABPC1-217ENST00000521067 SLC51BQ86UW2 128 aa12.7□□□□□ -0.38
PABPC1-217ENST00000521067 STPG4Q8N801 248 aa12.7□□□□□ -0.38
PABPC1-217ENST00000521067 LYPD6BQ8NI32 183 aa12.7□□□□□ -0.38
PABPC1-217ENST00000521067 C7orf33Q8WU49 177 aa12.7□□□□□ -0.38
PABPC1-217ENST00000521067 LINC00526Q96FQ7 95 aa12.69□□□□□ -0.38
PABPC1-217ENST00000521067 PRR3P79522 188 aaKnown RBP12.68□□□□□ -0.38
PABPC1-217ENST00000521067 OR5A1Q8NGJ0 315 aa12.68□□□□□ -0.38
PABPC1-217ENST00000521067 TRBV6-5A0A0K0K1A5 114 aa12.67□□□□□ -0.38
PABPC1-217ENST00000521067 ESDP10768 282 aa12.67□□□□□ -0.38
PABPC1-217ENST00000521067 TAGLN2P37802 199 aaKnown RBP12.67□□□□□ -0.38
PABPC1-217ENST00000521067 XCL1P47992 114 aa12.67□□□□□ -0.38
PABPC1-217ENST00000521067 SMIM15Q7Z3B0 74 aa12.67□□□□□ -0.38
PABPC1-217ENST00000521067 TCTE3Q8IZS6 198 aa12.67□□□□□ -0.38
PABPC1-217ENST00000521067 LINC01600Q96MT4 127 aa12.67□□□□□ -0.38
PABPC1-217ENST00000521067 LINC00959A0A1B0GUT2 108 aa12.66□□□□□ -0.38
PABPC1-217ENST00000521067 I3L3M4 83 aa12.66□□□□□ -0.38
PABPC1-217ENST00000521067 GATCO43716 136 aaKnown RBP12.66□□□□□ -0.38
PABPC1-217ENST00000521067 TSHBP01222 138 aa12.66□□□□□ -0.38
PABPC1-217ENST00000521067 PMCHP20382 165 aa12.66□□□□□ -0.38
PABPC1-217ENST00000521067 TEX261Q6UWH6 196 aa12.66□□□□□ -0.38
PABPC1-217ENST00000521067 CCL25O15444 150 aa12.65□□□□□ -0.38
PABPC1-217ENST00000521067 ZNF25P17030 456 aaPredicted RBP12.65□□□□□ -0.38
PABPC1-217ENST00000521067 FAM231DQ6ZW35 169 aa12.64□□□□□ -0.39
PABPC1-217ENST00000521067 TMEM242Q9NWH2 141 aa12.64□□□□□ -0.39
PABPC1-217ENST00000521067 A8MWL6 223 aa12.62□□□□□ -0.39
PABPC1-217ENST00000521067 TMEM250H0YL14 139 aa12.62□□□□□ -0.39
PABPC1-217ENST00000521067 POLR2KP53803 58 aaKnown RBP12.62□□□□□ -0.39
PABPC1-217ENST00000521067 BTF3L4Q96K17 158 aa12.62□□□□□ -0.39
PABPC1-217ENST00000521067 CDC42SE2Q9NRR3 84 aa12.62□□□□□ -0.39
PABPC1-217ENST00000521067 IGHV1-58A0A0C4DH39 117 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms