RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 NXT2Q9NPJ8 142 aaKnown RBP4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 IGHV3-38A0A0C4DH36 116 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 A0A1B0GUV1 79 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 LINC01546A6NGU7 62 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 LINC01549A6NIU2 74 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 GAS8-AS1O95177 125 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 LY6G6CO95867 125 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 NPYP01303 97 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 ESDP10768 282 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 PMCHP20382 165 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 G0S2P27469 103 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 FABP9Q0Z7S8 132 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 LAGE3Q14657 143 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 NTM-AS1Q6ZSK4 140 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 Q8N8P6 123 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 TMEM18Q96B42 140 aa4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 ALKBH7Q9BT30 221 aaPredicted RBP4.35□□□□□ -1.71
IGHV4-55-201ENST00000520889 IGLV2-18A0A075B6J9 118 aa4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 SMKR1H3BMG3 65 aa4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 TSHBP01222 138 aa4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 NPSP0C0P6 89 aa4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 ZNF25P17030 456 aaPredicted RBP4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 RAB5AP20339 215 aa4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 AMTP48728 403 aa4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 Q6ZR54 194 aa4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 NIT1Q86X76 327 aa4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 TMEM243Q9BU79 118 aa4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 TIMM21Q9BVV7 248 aa4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 CSDC2Q9Y534 153 aaKnown RBP4.34□□□□□ -1.71
IGHV4-55-201ENST00000520889 NBDYA0A0U1RRE5 68 aa4.33□□□□□ -1.72
IGHV4-55-201ENST00000520889 FCER1GP30273 86 aa4.33□□□□□ -1.72
IGHV4-55-201ENST00000520889 RAB5BP61020 215 aa4.33□□□□□ -1.72
IGHV4-55-201ENST00000520889 ORMDL2Q53FV1 153 aa4.33□□□□□ -1.72
IGHV4-55-201ENST00000520889 MRPL52Q86TS9 123 aaKnown RBP4.33□□□□□ -1.72
IGHV4-55-201ENST00000520889 WFDC10BQ8IUB3 73 aa4.33□□□□□ -1.72
IGHV4-55-201ENST00000520889 C20orf203Q8NBC4 194 aa4.33□□□□□ -1.72
IGHV4-55-201ENST00000520889 A0A087WX48 190 aa4.32□□□□□ -1.72
IGHV4-55-201ENST00000520889 IBA57-AS1B1ANH7 110 aa4.32□□□□□ -1.72
IGHV4-55-201ENST00000520889 UBE2L6O14933 153 aa4.32□□□□□ -1.72
IGHV4-55-201ENST00000520889 Q0VG73 95 aa4.32□□□□□ -1.72
IGHV4-55-201ENST00000520889 KIAA1644Q3SXP7 199 aa4.32□□□□□ -1.72
IGHV4-55-201ENST00000520889 C18orf32Q8TCD1 76 aa4.32□□□□□ -1.72
IGHV4-55-201ENST00000520889 CHCHD5Q9BSY4 110 aa4.32□□□□□ -1.72
IGHV4-55-201ENST00000520889 PYGO1Q9Y3Y4 419 aa4.32□□□□□ -1.72
IGHV4-55-201ENST00000520889 VPS13DQ5THJ4 4388 aa4.32□□□□□ -1.72
IGHV4-55-201ENST00000520889 ALMS1Q8TCU4 4167 aa4.32□□□□□ -1.72
IGHV4-55-201ENST00000520889 TRAV8-3A0A0A6YYJ7 113 aa4.31□□□□□ -1.72
IGHV4-55-201ENST00000520889 CCL25O15444 150 aa4.31□□□□□ -1.72
IGHV4-55-201ENST00000520889 TRGC2P03986 189 aa4.31□□□□□ -1.72
IGHV4-55-201ENST00000520889 IFI27P40305 119 aaPredicted RBP4.31□□□□□ -1.72
IGHV4-55-201ENST00000520889 NFE4Q86UQ8 179 aa4.31□□□□□ -1.72
IGHV4-55-201ENST00000520889 PRSS3P2Q8NHM4 247 aa4.31□□□□□ -1.72
IGHV4-55-201ENST00000520889 CHCHD1Q96BP2 118 aaKnown RBP4.31□□□□□ -1.72
IGHV4-55-201ENST00000520889 SPANXA1Q9NS26 97 aa4.31□□□□□ -1.72
IGHV4-55-201ENST00000520889 PRR34Q9NV39 138 aa4.31□□□□□ -1.72
IGHV4-55-201ENST00000520889 COX11Q9Y6N1 276 aa4.31□□□□□ -1.72
IGHV4-55-201ENST00000520889 TRAV8-4A0A0B4J246 113 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 LOC389332A0A1B0GUA5 103 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 TMEM262E9PQX1 116 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 SCO1O75880 301 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 LINC00614P0C842 121 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 FGF6P10767 208 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 RBX1P62877 108 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 MRPS36P82909 103 aaKnown RBP4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 MIAQ16674 131 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 MPV17L2Q567V2 206 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 AMMECR1LQ6DCA0 310 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 RMI2Q96E14 147 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 TMEM101Q96IK0 257 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 AP5S1Q9NUS5 200 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 CYSLTR1Q9Y271 337 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 UBE2D4Q9Y2X8 147 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 DNAH1Q9P2D7 4330 aa4.3□□□□□ -1.72
IGHV4-55-201ENST00000520889 IGHV3-30P01768 117 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 IGHV3-33P01772 117 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 IGHV3-30-3P0DP02 117 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 IGHV3-30-5P0DP03 117 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 GAGE6Q13070 117 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 PAPPA-AS1Q5QFB9 102 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 C2orf66Q6UXQ4 117 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 FA2HQ7L5A8 372 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 C6orf223Q8N319 242 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 OR5A1Q8NGJ0 315 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 TOMM6Q96B49 74 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 TIMM17AQ99595 171 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 TM2D2Q9BX73 214 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 CDC42SE2Q9NRR3 84 aa4.29□□□□□ -1.72
IGHV4-55-201ENST00000520889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 IGKV2-29A2NJV5 120 aaPredicted RBP4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 CRPP02741 224 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 ANGP03950 147 aaKnown RBP4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 REG3AQ06141 175 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 C1orf134Q5TEV5 83 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 DGAT2L7PQ6IED9 249 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 RNASEKQ6P5S7 137 aaKnown RBP4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 LINC00336Q6ZUF6 198 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 ERASQ7Z444 233 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 ZNF664Q8N3J9 261 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 Q8N976 141 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 URB1-AS1Q96HZ7 61 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms