RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 IGHV3OR16-12A0A075B7B8 117 aa9.51□□□□□ -0.89
TRAPPC9-208ENST00000520857 CHCHD5Q9BSY4 110 aa9.51□□□□□ -0.89
TRAPPC9-208ENST00000520857 PRM2P04554 102 aa9.51□□□□□ -0.89
TRAPPC9-208ENST00000520857 NSUN5P1Q3KNT7 163 aa9.5□□□□□ -0.89
TRAPPC9-208ENST00000520857 ADAMTSL4-AS1Q5T5F5 129 aa9.5□□□□□ -0.89
TRAPPC9-208ENST00000520857 YAE1D1Q9NRH1 226 aa9.5□□□□□ -0.89
TRAPPC9-208ENST00000520857 EIF4EBP3O60516 100 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC9-208ENST00000520857 KLRB1Q12918 225 aa9.5□□□□□ -0.89
TRAPPC9-208ENST00000520857 TRBV6-5A0A0K0K1A5 114 aa9.5□□□□□ -0.89
TRAPPC9-208ENST00000520857 TRBV30A0A0K0K1B3 111 aa9.5□□□□□ -0.89
TRAPPC9-208ENST00000520857 H7C423 109 aa9.5□□□□□ -0.89
TRAPPC9-208ENST00000520857 NHLRC4P0CG21 123 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC9-208ENST00000520857 COL12A1Q99715 3063 aa9.49□□□□□ -0.89
TRAPPC9-208ENST00000520857 IGHV1-58A0A0C4DH39 117 aa9.49□□□□□ -0.89
TRAPPC9-208ENST00000520857 NXPH4O95158 308 aa9.49□□□□□ -0.89
TRAPPC9-208ENST00000520857 ODF3Q96PU9 254 aa9.49□□□□□ -0.89
TRAPPC9-208ENST00000520857 TRBV7-9A0A0J9YWB2 115 aa9.48□□□□□ -0.89
TRAPPC9-208ENST00000520857 TMEM101Q96IK0 257 aa9.48□□□□□ -0.89
TRAPPC9-208ENST00000520857 POLQO75417 2590 aa9.48□□□□□ -0.89
TRAPPC9-208ENST00000520857 A0A0J9YX75 114 aa9.47□□□□□ -0.89
TRAPPC9-208ENST00000520857 FAM236AA0A1B0GUQ0 79 aa9.47□□□□□ -0.89
TRAPPC9-208ENST00000520857 FAM236BA0A1B0GV22 79 aa9.47□□□□□ -0.89
TRAPPC9-208ENST00000520857 TRAV13-1A0A0B4J241 112 aa9.47□□□□□ -0.89
TRAPPC9-208ENST00000520857 H3BT86 120 aa9.47□□□□□ -0.89
TRAPPC9-208ENST00000520857 IGHG2P01859 326 aa9.47□□□□□ -0.89
TRAPPC9-208ENST00000520857 C10orf99Q6UWK7 81 aa9.47□□□□□ -0.89
TRAPPC9-208ENST00000520857 IGHV4-61A0A0C4DH41 118 aa9.47□□□□□ -0.89
TRAPPC9-208ENST00000520857 IGKV3OR2-268A0A0C4DH90 116 aa9.47□□□□□ -0.89
TRAPPC9-208ENST00000520857 MIAQ16674 131 aa9.47□□□□□ -0.89
TRAPPC9-208ENST00000520857 PIMREGQ9BSJ6 248 aa9.47□□□□□ -0.89
TRAPPC9-208ENST00000520857 DEFB131AP59861 70 aa9.46□□□□□ -0.89
TRAPPC9-208ENST00000520857 DCANP1Q8TF63 244 aa9.46□□□□□ -0.89
TRAPPC9-208ENST00000520857 LINC01587Q99440 93 aa9.46□□□□□ -0.89
TRAPPC9-208ENST00000520857 SONP18583 2426 aaKnown RBP9.46□□□□□ -0.89
TRAPPC9-208ENST00000520857 ATP5J2P56134 94 aa9.46□□□□□ -0.89
TRAPPC9-208ENST00000520857 FAM19A4Q96LR4 140 aa9.46□□□□□ -0.89
TRAPPC9-208ENST00000520857 C9orf85Q96MD7 179 aa9.46□□□□□ -0.89
TRAPPC9-208ENST00000520857 Q9H8V8 135 aa9.46□□□□□ -0.9
TRAPPC9-208ENST00000520857 RS1O15537 224 aa9.45□□□□□ -0.9
TRAPPC9-208ENST00000520857 CDKN2A-AS1Q9UH64 79 aa9.45□□□□□ -0.9
TRAPPC9-208ENST00000520857 LY6DQ14210 128 aa9.45□□□□□ -0.9
TRAPPC9-208ENST00000520857 PRIMA1Q86XR5 153 aa9.45□□□□□ -0.9
TRAPPC9-208ENST00000520857 VSIG2Q96IQ7 327 aa9.44□□□□□ -0.9
TRAPPC9-208ENST00000520857 HRNRQ86YZ3 2850 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC9-208ENST00000520857 TMEM61Q8N0U2 210 aa9.44□□□□□ -0.9
TRAPPC9-208ENST00000520857 C9orf153Q5TBE3 101 aa9.44□□□□□ -0.9
TRAPPC9-208ENST00000520857 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
TRAPPC9-208ENST00000520857 POM121L12Q8N7R1 296 aa9.44□□□□□ -0.9
TRAPPC9-208ENST00000520857 TOMM7Q9P0U1 55 aa9.44□□□□□ -0.9
TRAPPC9-208ENST00000520857 Q9UF83 564 aa9.44□□□□□ -0.9
TRAPPC9-208ENST00000520857 GAGE2AQ6NT46 116 aa9.43□□□□□ -0.9
TRAPPC9-208ENST00000520857 H3BUA1 57 aa9.43□□□□□ -0.9
TRAPPC9-208ENST00000520857 JMJD1CQ15652 2540 aa9.43□□□□□ -0.9
TRAPPC9-208ENST00000520857 LST1O00453 97 aa9.43□□□□□ -0.9
TRAPPC9-208ENST00000520857 IGHV3-53P01767 116 aa9.43□□□□□ -0.9
TRAPPC9-208ENST00000520857 LINC00467Q9BRT7 94 aa9.42□□□□□ -0.9
TRAPPC9-208ENST00000520857 HOXD3P31249 432 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-208ENST00000520857 MRPS36P82909 103 aaKnown RBP9.42□□□□□ -0.9
TRAPPC9-208ENST00000520857 K7EMT4 169 aa9.41□□□□□ -0.9
TRAPPC9-208ENST00000520857 IGHV4-59P01825 116 aa9.41□□□□□ -0.9
TRAPPC9-208ENST00000520857 SHISA2Q6UWI4 295 aa9.41□□□□□ -0.9
TRAPPC9-208ENST00000520857 CCL19Q99731 98 aa9.41□□□□□ -0.9
TRAPPC9-208ENST00000520857 Q6Q795 121 aa9.41□□□□□ -0.9
TRAPPC9-208ENST00000520857 CENPEQ02224 2701 aa9.41□□□□□ -0.9
TRAPPC9-208ENST00000520857 A6NDX4 124 aa9.4□□□□□ -0.9
TRAPPC9-208ENST00000520857 DNAL4O96015 105 aa9.4□□□□□ -0.9
TRAPPC9-208ENST00000520857 BAALC-AS2P0C853 105 aa9.4□□□□□ -0.9
TRAPPC9-208ENST00000520857 ZNF415Q09FC8 603 aa9.4□□□□□ -0.9
TRAPPC9-208ENST00000520857 CCDC168Q8NDH2 2452 aa9.4□□□□□ -0.9
TRAPPC9-208ENST00000520857 K7EQG2 157 aa9.4□□□□□ -0.9
TRAPPC9-208ENST00000520857 KLK9Q2XQG4 91 aa9.4□□□□□ -0.9
TRAPPC9-208ENST00000520857 DEFB136Q30KP8 78 aa9.4□□□□□ -0.9
TRAPPC9-208ENST00000520857 DYNLRB2Q8TF09 96 aa9.4□□□□□ -0.9
TRAPPC9-208ENST00000520857 SPANXA1Q9NS26 97 aa9.4□□□□□ -0.9
TRAPPC9-208ENST00000520857 M0QXV9 152 aa9.4□□□□□ -0.91
TRAPPC9-208ENST00000520857 C19orf54Q5BKX5 351 aa9.4□□□□□ -0.91
TRAPPC9-208ENST00000520857 TINCRA0A1B0GVN0 87 aa9.39□□□□□ -0.91
TRAPPC9-208ENST00000520857 SPANXDQ9BXN6 97 aa9.39□□□□□ -0.91
TRAPPC9-208ENST00000520857 SPANXCQ9NY87 97 aa9.39□□□□□ -0.91
TRAPPC9-208ENST00000520857 MYO18BQ8IUG5 2567 aa9.39□□□□□ -0.91
TRAPPC9-208ENST00000520857 CELSR1Q9NYQ6 3014 aa9.39□□□□□ -0.91
TRAPPC9-208ENST00000520857 ABCA2Q9BZC7 2435 aa9.39□□□□□ -0.91
TRAPPC9-208ENST00000520857 UBE2E2Q96LR5 201 aa9.38□□□□□ -0.91
TRAPPC9-208ENST00000520857 LITAFQ99732 161 aa9.38□□□□□ -0.91
TRAPPC9-208ENST00000520857 PYGO1Q9Y3Y4 419 aa9.38□□□□□ -0.91
TRAPPC9-208ENST00000520857 MAPK1IP1LQ8NDC0 245 aa9.38□□□□□ -0.91
TRAPPC9-208ENST00000520857 Q9HAA7 133 aa9.38□□□□□ -0.91
TRAPPC9-208ENST00000520857 EDA2RQ9HAV5 297 aa9.38□□□□□ -0.91
TRAPPC9-208ENST00000520857 FN1P02751 2386 aaKnown RBP9.38□□□□□ -0.91
TRAPPC9-208ENST00000520857 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
TRAPPC9-208ENST00000520857 TRGV1A0A0A0MS02 117 aa9.37□□□□□ -0.91
TRAPPC9-208ENST00000520857 MSMBP08118 114 aa9.37□□□□□ -0.91
TRAPPC9-208ENST00000520857 DAZ2Q13117 558 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-208ENST00000520857 DAZ4Q86SG3 579 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-208ENST00000520857 LINC00308Q8TCZ7 52 aa9.37□□□□□ -0.91
TRAPPC9-208ENST00000520857 DAZ3Q9NR90 486 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-208ENST00000520857 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
TRAPPC9-208ENST00000520857 COPS9Q8WXC6 57 aa9.37□□□□□ -0.91
TRAPPC9-208ENST00000520857 Q6ZSN1 163 aa9.37□□□□□ -0.91
TRAPPC9-208ENST00000520857 UBE2D4Q9Y2X8 147 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms