RNA–Protein interactions for RNA: ENST00000520522.1

CTNNA1-224, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 390 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-224ENST00000520522 KANTRA0A1W2PQU2 76 aa5.68□□□□□ -1.5
CTNNA1-224ENST00000520522 hDV102S1A0JD36 115 aa5.68□□□□□ -1.5
CTNNA1-224ENST00000520522 XKRY2A2RUG3 117 aa5.68□□□□□ -1.5
CTNNA1-224ENST00000520522 F2Z2F3 143 aa5.68□□□□□ -1.5
CTNNA1-224ENST00000520522 TRGC1P0CF51 173 aa5.68□□□□□ -1.5
CTNNA1-224ENST00000520522 CENPWQ5EE01 88 aa5.68□□□□□ -1.5
CTNNA1-224ENST00000520522 RASL11AQ6T310 242 aa5.68□□□□□ -1.5
CTNNA1-224ENST00000520522 Q6ZRU5 148 aa5.68□□□□□ -1.5
CTNNA1-224ENST00000520522 OR2D3Q8NGH3 330 aa5.68□□□□□ -1.5
CTNNA1-224ENST00000520522 TPPP3Q9BW30 176 aa5.68□□□□□ -1.5
CTNNA1-224ENST00000520522 AP5S1Q9NUS5 200 aa5.68□□□□□ -1.5
CTNNA1-224ENST00000520522 IGLV4-60A0A075B6I1 120 aa5.67□□□□□ -1.5
CTNNA1-224ENST00000520522 MT1HL1P0DM35 61 aa5.67□□□□□ -1.5
CTNNA1-224ENST00000520522 NKX2-5P52952 324 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-224ENST00000520522 CCL20P78556 96 aa5.67□□□□□ -1.5
CTNNA1-224ENST00000520522 GFRA4Q9GZZ7 299 aa5.67□□□□□ -1.5
CTNNA1-224ENST00000520522 DPH3P1Q9H4G8 78 aa5.67□□□□□ -1.5
CTNNA1-224ENST00000520522 NIT2Q9NQR4 276 aa5.67□□□□□ -1.5
CTNNA1-224ENST00000520522 GNG13Q9P2W3 67 aa5.67□□□□□ -1.5
CTNNA1-224ENST00000520522 GNG4P50150 75 aa5.66□□□□□ -1.5
CTNNA1-224ENST00000520522 RAB5CP51148 216 aa5.66□□□□□ -1.5
CTNNA1-224ENST00000520522 COTL1Q14019 142 aa5.66□□□□□ -1.5
CTNNA1-224ENST00000520522 WDR73Q6P4I2 378 aa5.66□□□□□ -1.5
CTNNA1-224ENST00000520522 SPACA4Q8TDM5 124 aa5.66□□□□□ -1.5
CTNNA1-224ENST00000520522 BIN3Q9NQY0 253 aa5.66□□□□□ -1.5
CTNNA1-224ENST00000520522 LRP2P98164 4655 aa5.66□□□□□ -1.5
CTNNA1-224ENST00000520522 A0A087WYN8 130 aa5.65□□□□□ -1.5
CTNNA1-224ENST00000520522 TEX46H3BTG2 121 aa5.65□□□□□ -1.5
CTNNA1-224ENST00000520522 UBE2L6O14933 153 aa5.65□□□□□ -1.5
CTNNA1-224ENST00000520522 PDE6DO43924 150 aa5.65□□□□□ -1.5
CTNNA1-224ENST00000520522 IFNA1P01562 189 aa5.65□□□□□ -1.5
CTNNA1-224ENST00000520522 SLPIP03973 132 aa5.65□□□□□ -1.5
CTNNA1-224ENST00000520522 CTRLP40313 264 aa5.65□□□□□ -1.5
CTNNA1-224ENST00000520522 AMTP48728 403 aa5.65□□□□□ -1.5
CTNNA1-224ENST00000520522 LYZL1Q6UWQ5 148 aa5.65□□□□□ -1.5
CTNNA1-224ENST00000520522 CNFNQ9BYD5 112 aa5.65□□□□□ -1.5
CTNNA1-224ENST00000520522 PLAC8Q9NZF1 115 aa5.65□□□□□ -1.5
CTNNA1-224ENST00000520522 TRBV20OR9-2A0A075B6H5 130 aa5.64□□□□□ -1.51
CTNNA1-224ENST00000520522 NTF3P20783 257 aa5.64□□□□□ -1.51
CTNNA1-224ENST00000520522 SULT1A2P50226 295 aa5.64□□□□□ -1.51
CTNNA1-224ENST00000520522 MEF2BQ02080 365 aaPredicted RBP5.64□□□□□ -1.51
CTNNA1-224ENST00000520522 EIF5AL1Q6IS14 154 aaKnown RBP5.64□□□□□ -1.51
CTNNA1-224ENST00000520522 CFAP161Q6P656 301 aa5.64□□□□□ -1.51
CTNNA1-224ENST00000520522 C9orf62Q8N4C0 152 aa5.64□□□□□ -1.51
CTNNA1-224ENST00000520522 C15orf56Q8N910 161 aa5.64□□□□□ -1.51
CTNNA1-224ENST00000520522 RNF213Q63HN8 5207 aa5.63□□□□□ -1.51
CTNNA1-224ENST00000520522 RAB19A4D1S5 217 aa5.63□□□□□ -1.51
CTNNA1-224ENST00000520522 NCR2O95944 276 aa5.63□□□□□ -1.51
CTNNA1-224ENST00000520522 CHTF8P0CG12 524 aa5.63□□□□□ -1.51
CTNNA1-224ENST00000520522 C7orf33Q8WU49 177 aa5.63□□□□□ -1.51
CTNNA1-224ENST00000520522 GAGE12HA6NDE8 117 aa5.62□□□□□ -1.51
CTNNA1-224ENST00000520522 H7C423 109 aa5.62□□□□□ -1.51
CTNNA1-224ENST00000520522 BCL2P10415 239 aa5.62□□□□□ -1.51
CTNNA1-224ENST00000520522 TAGLN2P37802 199 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-224ENST00000520522 RPS10P46783 165 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-224ENST00000520522 GATD1Q8NB37 220 aa5.62□□□□□ -1.51
CTNNA1-224ENST00000520522 NUDT10Q8NFP7 164 aa5.62□□□□□ -1.51
CTNNA1-224ENST00000520522 DPH3Q96FX2 82 aa5.62□□□□□ -1.51
CTNNA1-224ENST00000520522 NUDT11Q96G61 164 aa5.62□□□□□ -1.51
CTNNA1-224ENST00000520522 MED9Q9NWA0 146 aa5.62□□□□□ -1.51
CTNNA1-224ENST00000520522 GVQW2A0A096LPI5 108 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-224ENST00000520522 PHOX2AO14813 284 aa5.61□□□□□ -1.51
CTNNA1-224ENST00000520522 NDUFS6O75380 124 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-224ENST00000520522 TWIST1Q15672 202 aa5.61□□□□□ -1.51
CTNNA1-224ENST00000520522 AMMECR1LQ6DCA0 310 aa5.61□□□□□ -1.51
CTNNA1-224ENST00000520522 CHCHD10Q8WYQ3 142 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-224ENST00000520522 RPP21Q9H633 154 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-224ENST00000520522 TRAV26-2A0A0B4J265 109 aa5.6□□□□□ -1.51
CTNNA1-224ENST00000520522 IGKV3OR2-268A0A0C4DH90 116 aa5.6□□□□□ -1.51
CTNNA1-224ENST00000520522 APCSP02743 223 aa5.6□□□□□ -1.51
CTNNA1-224ENST00000520522 ZNF25P17030 456 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-224ENST00000520522 COX6A2Q02221 97 aa5.6□□□□□ -1.51
CTNNA1-224ENST00000520522 HIGD2BQ4VC39 106 aa5.6□□□□□ -1.51
CTNNA1-224ENST00000520522 TEX261Q6UWH6 196 aa5.6□□□□□ -1.51
CTNNA1-224ENST00000520522 Q6ZNX1 250 aa5.6□□□□□ -1.51
CTNNA1-224ENST00000520522 SMIM15Q7Z3B0 74 aa5.6□□□□□ -1.51
CTNNA1-224ENST00000520522 PKIGQ9Y2B9 76 aa5.6□□□□□ -1.51
CTNNA1-224ENST00000520522 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 IGKV2-29A2NJV5 120 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 SDHAF1A6NFY7 115 aa5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 K7EN84 100 aa5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 FGF6P10767 208 aa5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 PRR3P79522 188 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 FOXI1Q12951 378 aa5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 MAJINQ3KP22 176 aa5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 OR5A1Q8NGJ0 315 aa5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 PRSS3P2Q8NHM4 247 aa5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 RPL39LQ96EH5 51 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 FAM210AQ96ND0 272 aa5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 RNASE7Q9H1E1 156 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 LINC00474Q9P2X8 69 aa5.59□□□□□ -1.51
CTNNA1-224ENST00000520522 IGKV2-24A0A0C4DH68 120 aa5.58□□□□□ -1.52
CTNNA1-224ENST00000520522 TRBV6-5A0A0K0K1A5 114 aa5.58□□□□□ -1.52
CTNNA1-224ENST00000520522 RNASEKQ6P5S7 137 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-224ENST00000520522 SLC51BQ86UW2 128 aa5.58□□□□□ -1.52
CTNNA1-224ENST00000520522 STPG4Q8N801 248 aa5.58□□□□□ -1.52
CTNNA1-224ENST00000520522 GTSF1Q8WW33 167 aa5.58□□□□□ -1.52
CTNNA1-224ENST00000520522 LINC01600Q96MT4 127 aa5.58□□□□□ -1.52
CTNNA1-224ENST00000520522 A0A096LNI7 61 aa5.57□□□□□ -1.52
CTNNA1-224ENST00000520522 IGHV1-58A0A0C4DH39 117 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms