RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 IGLV4-3A0A075B6K6 122 aa6.08□□□□□ -1.44
HMGB4-203ENST00000519684 ZNF815PA8K554 130 aa6.08□□□□□ -1.44
HMGB4-203ENST00000519684 HIST1H4GQ99525 98 aa6.08□□□□□ -1.44
HMGB4-203ENST00000519684 OPRPNQ99935 248 aaPredicted RBP6.08□□□□□ -1.44
HMGB4-203ENST00000519684 NOP10Q9NPE3 64 aaKnown RBP6.08□□□□□ -1.44
HMGB4-203ENST00000519684 NACAE9PAV3 2078 aa6.08□□□□□ -1.44
HMGB4-203ENST00000519684 ACANP16112 2415 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 GIG44P09565 113 aaPredicted RBP6.07□□□□□ -1.44
HMGB4-203ENST00000519684 DAZ2Q13117 558 aaKnown RBP6.07□□□□□ -1.44
HMGB4-203ENST00000519684 UBE2V1Q13404 147 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 RRN3P1Q2M238 152 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 SHISA2Q6UWI4 295 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 Q6ZTI0 123 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 NFE4Q86UQ8 179 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 CEND1Q8N111 149 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 PHLDA1Q8WV24 401 aaPredicted RBP6.07□□□□□ -1.44
HMGB4-203ENST00000519684 SPANXA1Q9NS26 97 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 FASNP49327 2511 aaKnown RBP6.07□□□□□ -1.44
HMGB4-203ENST00000519684 HIVEP2P31629 2446 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 K7EQD1 137 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 SMIM13P0DJ93 91 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 INSL3P51460 131 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 CRYBA4P53673 196 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 RPL36AP83881 106 aaKnown RBP6.07□□□□□ -1.44
HMGB4-203ENST00000519684 C9orf66Q5T8R8 295 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 SCGB1D4Q6XE38 83 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 RPL36ALQ969Q0 106 aaKnown RBP6.07□□□□□ -1.44
HMGB4-203ENST00000519684 ZNF479Q96JC4 524 aa6.07□□□□□ -1.44
HMGB4-203ENST00000519684 ANK3Q12955 4377 aaKnown RBP6.06□□□□□ -1.44
HMGB4-203ENST00000519684 WNK1Q9H4A3 2382 aa6.06□□□□□ -1.44
HMGB4-203ENST00000519684 IGHV3-38A0A0C4DH36 116 aa6.06□□□□□ -1.44
HMGB4-203ENST00000519684 TRBV10-1A0A0K0K1A3 114 aa6.06□□□□□ -1.44
HMGB4-203ENST00000519684 CRLF1O75462 422 aa6.06□□□□□ -1.44
HMGB4-203ENST00000519684 ZNRF2Q8NHG8 242 aa6.06□□□□□ -1.44
HMGB4-203ENST00000519684 CHCHD7Q9BUK0 85 aa6.06□□□□□ -1.44
HMGB4-203ENST00000519684 Q9UF83 564 aa6.06□□□□□ -1.44
HMGB4-203ENST00000519684 TRBV7-3A0A075B6L6 115 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 TRGV2A0A075B6R0 118 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 C9orf118A6NHY6 69 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 FXYD2P54710 66 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 TM2D2Q9BX73 214 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 NF1P21359 2839 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 CUBNO60494 3623 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.05□□□□□ -1.44
HMGB4-203ENST00000519684 GAGE12BA1L429 117 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 IGKV2-29A2NJV5 120 aaPredicted RBP6.05□□□□□ -1.44
HMGB4-203ENST00000519684 GAGE7O76087 117 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 GAGE12FP0CL80 117 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 GAGE12GP0CL81 117 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 GAGE12IP0CL82 117 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 LGALS3P17931 250 aaKnown RBP6.05□□□□□ -1.44
HMGB4-203ENST00000519684 CSNK1G2-AS1Q8NCQ2 148 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 RAB37Q96AX2 223 aa6.05□□□□□ -1.44
HMGB4-203ENST00000519684 A0A0J9YXV3 536 aa6.04□□□□□ -1.44
HMGB4-203ENST00000519684 AMMECR1LQ6DCA0 310 aa6.04□□□□□ -1.44
HMGB4-203ENST00000519684 AMELXQ99217 191 aa6.04□□□□□ -1.44
HMGB4-203ENST00000519684 UBE2D4Q9Y2X8 147 aa6.04□□□□□ -1.44
HMGB4-203ENST00000519684 TMEM223A0PJW6 202 aa6.04□□□□□ -1.44
HMGB4-203ENST00000519684 H3BUT2 72 aa6.04□□□□□ -1.44
HMGB4-203ENST00000519684 LEPROTO15243 131 aa6.04□□□□□ -1.44
HMGB4-203ENST00000519684 CCL25O15444 150 aa6.04□□□□□ -1.44
HMGB4-203ENST00000519684 ZNF22P17026 224 aaPredicted RBP6.04□□□□□ -1.44
HMGB4-203ENST00000519684 DGAT2L7PQ6IED9 249 aa6.04□□□□□ -1.44
HMGB4-203ENST00000519684 CEMP1Q6PRD7 247 aaPredicted RBP6.04□□□□□ -1.44
HMGB4-203ENST00000519684 DAZ4Q86SG3 579 aaKnown RBP6.04□□□□□ -1.44
HMGB4-203ENST00000519684 OVOL2Q9BRP0 275 aa6.04□□□□□ -1.44
HMGB4-203ENST00000519684 DAZ3Q9NR90 486 aaKnown RBP6.04□□□□□ -1.44
HMGB4-203ENST00000519684 NHP2Q9NX24 153 aaKnown RBP6.04□□□□□ -1.44
HMGB4-203ENST00000519684 PLAC8L1A1L4L8 177 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 J3QQQ9 107 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 SMAGPQ0VAQ4 97 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.03□□□□□ -1.44
HMGB4-203ENST00000519684 SLC25A29Q8N8R3 303 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 PLEKHB2Q96CS7 222 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 TRGV4A0A0C4DH28 118 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 GAGE12JA6NER3 117 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 GAGE4Q13068 117 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 GAGE5Q13069 117 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 SRSF9Q13242 221 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB4-203ENST00000519684 GAGE13Q4V321 117 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 OXLD1Q5BKU9 147 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 RNASE13Q5GAN3 156 aaKnown RBP6.03□□□□□ -1.44
HMGB4-203ENST00000519684 GTF2H5Q6ZYL4 71 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 TIMM21Q9BVV7 248 aa6.03□□□□□ -1.44
HMGB4-203ENST00000519684 K7EP13 123 aa6.02□□□□□ -1.45
HMGB4-203ENST00000519684 MRPS36P82909 103 aaKnown RBP6.02□□□□□ -1.45
HMGB4-203ENST00000519684 Q6ZUT4 128 aa6.02□□□□□ -1.45
HMGB4-203ENST00000519684 MTORP42345 2549 aa6.02□□□□□ -1.45
HMGB4-203ENST00000519684 HECTD1Q9ULT8 2610 aa6.02□□□□□ -1.45
HMGB4-203ENST00000519684 TINCRA0A1B0GVN0 87 aa6.02□□□□□ -1.45
HMGB4-203ENST00000519684 GAGE10A6NGK3 116 aa6.02□□□□□ -1.45
HMGB4-203ENST00000519684 K7ERJ3 54 aa6.02□□□□□ -1.45
HMGB4-203ENST00000519684 TSPEAR-AS2P59090 65 aa6.02□□□□□ -1.45
HMGB4-203ENST00000519684 UBE2D3P61077 147 aa6.02□□□□□ -1.45
HMGB4-203ENST00000519684 UBE2D2P62837 147 aa6.02□□□□□ -1.45
HMGB4-203ENST00000519684 IGHV3-64A0A075B6Q5 118 aa6.01□□□□□ -1.45
HMGB4-203ENST00000519684 TRBV6-4A0A1B0GX49 114 aa6.01□□□□□ -1.45
HMGB4-203ENST00000519684 FABP2P12104 132 aa6.01□□□□□ -1.45
HMGB4-203ENST00000519684 SAMD5Q5TGI4 173 aa6.01□□□□□ -1.45
HMGB4-203ENST00000519684 FAM104AQ969W3 186 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms