RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 NTF3P20783 257 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 SRIP30626 198 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 CKS2P33552 79 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 CTRLP40313 264 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 HNRNPA3P51991 378 aaKnown RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 EMP1P54849 157 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 CCL18P55774 89 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 FXYD7P58549 80 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 UBE2V1Q13404 147 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 ELOBQ15370 118 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 ZNF56Q15929 161 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 MRPL23Q16540 153 aaKnown RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 MUC21Q5SSG8 566 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 C10orf91Q5T1B1 145 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 FAM74A4Q5TZK3 123 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 GDF5OSQ5U4N7 250 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 FAM222AQ5U5X8 452 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 LYZL1Q6UWQ5 148 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 AMTNQ6UX39 209 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 LINC00322Q6ZN03 302 aaPredicted RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 DAZ4Q86SG3 579 aaKnown RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 ORMDL3Q8N138 153 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 FAM24BQ8N5W8 94 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 ZFAND2AQ8N6M9 145 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 MAPKAPK5-AS1Q8N8E1 139 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 PGLYRP4Q96LB8 373 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 C18orf15Q96N68 181 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 TM2D3Q9BRN9 247 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 DERL1Q9BUN8 251 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 GNB1LQ9BYB4 327 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 CNFNQ9BYD5 112 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 TMEM191AQ9H0A3 160 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 RNASE7Q9H1E1 156 aaKnown RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 NOP10Q9NPE3 64 aaKnown RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 NXT2Q9NPJ8 142 aaKnown RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 DAZ3Q9NR90 486 aaKnown RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 GSN-AS1Q9NRJ2 163 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 PRO0255Q9UI72 69 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 HHLA3Q9XRX5 114 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 TRAPPC1Q9Y5R8 145 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 ICOSQ9Y6W8 199 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 TENM1Q9UKZ4 2725 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 TRBV20OR9-2A0A075B6H5 130 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 TRBV7-3A0A075B6L6 115 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 TRBV25-1A0A075B6N4 114 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 IGHV3-16A0A0C4DH30 117 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 GRIFINA4D1Z8 144 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 C1orf196B1AJZ1 125 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 F5H768 121 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 K7EIL1 84 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 K7EN84 100 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 K7EQD1 137 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 CCL25O15444 150 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 CRXO43186 299 aaPredicted RBP1.29□□□□□ -2.2
CCNC-208ENST00000519617 GNRH2O43555 120 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 SPINK4O60575 86 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 ATP6V1G1O75348 118 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 EIF3GO75821 320 aaKnown RBP eCLIP1.29□□□□□ -2.2
CCNC-208ENST00000519617 NXPH4O95158 308 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 IGLV2-8P01709 118 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 IGHV3-53P01767 116 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 S100A6P06703 90 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 MGPP08493 103 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 P0DMU3 169 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 FAM231AP0DMU4 169 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 FAM231CP0DMU5 169 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 HTN3P15516 51 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 FCER1GP30273 86 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 RPS10P46783 165 aaKnown RBP1.29□□□□□ -2.2
CCNC-208ENST00000519617 SEC11AP67812 179 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 FABP9Q0Z7S8 132 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 COTL1Q14019 142 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 ORMDL2Q53FV1 153 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 OR10J3Q5JRS4 329 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 AMMECR1LQ6DCA0 310 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 Q6ZN92 141 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 FA2HQ7L5A8 372 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 NEGR1Q7Z3B1 354 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 SBSPONQ8IVN8 264 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 UBE2DNLQ8IWF7 75 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 SLC7A5P1Q8MH63 180 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 C1orf158Q8N1D5 194 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 C10orf126Q8N4M7 172 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 Q8NAQ8 132 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 C11orf72Q8NBR9 251 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 CSNK1G2-AS1Q8NCQ2 148 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 NUP35Q8NFH5 326 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 RMI2Q96E14 147 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 TMEM101Q96IK0 257 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 C9orf85Q96MD7 179 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 C20orf78Q9BR46 151 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 CHCHD7Q9BUK0 85 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 WFDC10AQ9H1F0 79 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 GTSF1LQ9H1H1 148 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 MAP1LC3AQ9H492 121 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 EDA2RQ9HAV5 297 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 ST20Q9HBF5 79 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 NIT2Q9NQR4 276 aa1.29□□□□□ -2.2
CCNC-208ENST00000519617 PKIGQ9Y2B9 76 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms