RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 PRSS1P07477 247 aa13.78□□□□□ -0.2
ARFGEF1-206ENST00000519436 REG3AQ06141 175 aa13.78□□□□□ -0.2
ARFGEF1-206ENST00000519436 DEFB104AQ8WTQ1 72 aa13.78□□□□□ -0.2
ARFGEF1-206ENST00000519436 CHAC1Q9BUX1 264 aa13.78□□□□□ -0.2
ARFGEF1-206ENST00000519436 GFRA4Q9GZZ7 299 aa13.78□□□□□ -0.2
ARFGEF1-206ENST00000519436 DMBT1Q9UGM3 2413 aaPredicted RBP13.78□□□□□ -0.2
ARFGEF1-206ENST00000519436 TRAV26-2A0A0B4J265 109 aa13.77□□□□□ -0.21
ARFGEF1-206ENST00000519436 HLA-DQA1P01909 254 aa13.77□□□□□ -0.21
ARFGEF1-206ENST00000519436 A0A1B0GVG6 124 aa13.76□□□□□ -0.21
ARFGEF1-206ENST00000519436 LINC00528Q8N1L1 170 aa13.76□□□□□ -0.21
ARFGEF1-206ENST00000519436 A8MWL6 223 aa13.75□□□□□ -0.21
ARFGEF1-206ENST00000519436 CT83Q5H943 113 aa13.75□□□□□ -0.21
ARFGEF1-206ENST00000519436 COTL1Q14019 142 aa13.74□□□□□ -0.21
ARFGEF1-206ENST00000519436 DGAT2L7PQ6IED9 249 aa13.74□□□□□ -0.21
ARFGEF1-206ENST00000519436 CIRBP-AS1Q8TBR5 109 aa13.74□□□□□ -0.21
ARFGEF1-206ENST00000519436 RPL39LQ96EH5 51 aaKnown RBP13.74□□□□□ -0.21
ARFGEF1-206ENST00000519436 FAM210AQ96ND0 272 aa13.74□□□□□ -0.21
ARFGEF1-206ENST00000519436 IGLV10-54A0A075B6I4 117 aa13.73□□□□□ -0.21
ARFGEF1-206ENST00000519436 TRAV8-4A0A0B4J246 113 aa13.73□□□□□ -0.21
ARFGEF1-206ENST00000519436 AMTP48728 403 aa13.73□□□□□ -0.21
ARFGEF1-206ENST00000519436 CEBPGP53567 150 aa13.73□□□□□ -0.21
ARFGEF1-206ENST00000519436 LINC01551Q86U37 167 aa13.73□□□□□ -0.21
ARFGEF1-206ENST00000519436 EIF5A2Q9GZV4 153 aaKnown RBP13.73□□□□□ -0.21
ARFGEF1-206ENST00000519436 PLA2G1BP04054 148 aaKnown RBP13.72□□□□□ -0.21
ARFGEF1-206ENST00000519436 SRP19P09132 144 aaKnown RBP13.72□□□□□ -0.21
ARFGEF1-206ENST00000519436 C9orf163Q8N9P6 203 aa13.72□□□□□ -0.21
ARFGEF1-206ENST00000519436 SMIM7Q9BQ49 75 aa13.72□□□□□ -0.21
ARFGEF1-206ENST00000519436 KRTAP10-4P60372 401 aaPredicted RBP13.71□□□□□ -0.21
ARFGEF1-206ENST00000519436 SMIM15Q7Z3B0 74 aa13.71□□□□□ -0.21
ARFGEF1-206ENST00000519436 TEX261Q6UWH6 196 aa13.7□□□□□ -0.22
ARFGEF1-206ENST00000519436 TSKUQ8WUA8 353 aa13.7□□□□□ -0.22
ARFGEF1-206ENST00000519436 UBE2L6O14933 153 aa13.69□□□□□ -0.22
ARFGEF1-206ENST00000519436 GAS8-AS1O95177 125 aa13.69□□□□□ -0.22
ARFGEF1-206ENST00000519436 NCR2O95944 276 aa13.69□□□□□ -0.22
ARFGEF1-206ENST00000519436 CLRN3Q8NCR9 226 aa13.69□□□□□ -0.22
ARFGEF1-206ENST00000519436 OSTCQ9NRP0 149 aa13.69□□□□□ -0.22
ARFGEF1-206ENST00000519436 TRBV6-5A0A0K0K1A5 114 aa13.68□□□□□ -0.22
ARFGEF1-206ENST00000519436 SDHAF1A6NFY7 115 aa13.68□□□□□ -0.22
ARFGEF1-206ENST00000519436 ZNF727A8MUV8 499 aa13.68□□□□□ -0.22
ARFGEF1-206ENST00000519436 FAM231BA6NCW3 169 aa13.67□□□□□ -0.22
ARFGEF1-206ENST00000519436 HIGD1CA8MV81 97 aa13.67□□□□□ -0.22
ARFGEF1-206ENST00000519436 SDIM1Q6ZPB5 146 aa13.67□□□□□ -0.22
ARFGEF1-206ENST00000519436 A0A1B0GUT8 65 aa13.66□□□□□ -0.22
ARFGEF1-206ENST00000519436 SLPIP03973 132 aa13.66□□□□□ -0.22
ARFGEF1-206ENST00000519436 CNBPP62633 177 aaKnown RBP13.66□□□□□ -0.22
ARFGEF1-206ENST00000519436 RNF185Q96GF1 192 aa13.66□□□□□ -0.22
ARFGEF1-206ENST00000519436 TMEM191AQ9H0A3 160 aa13.66□□□□□ -0.22
ARFGEF1-206ENST00000519436 H7C423 109 aa13.65□□□□□ -0.22
ARFGEF1-206ENST00000519436 V9GYV3 84 aa13.65□□□□□ -0.22
ARFGEF1-206ENST00000519436 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.64□□□□□ -0.23
ARFGEF1-206ENST00000519436 IGKV2-29A2NJV5 120 aaPredicted RBP13.64□□□□□ -0.23
ARFGEF1-206ENST00000519436 C9JQL5 133 aa13.64□□□□□ -0.23
ARFGEF1-206ENST00000519436 PANO1I0J062 215 aa13.63□□□□□ -0.23
ARFGEF1-206ENST00000519436 I3L3M4 83 aa13.63□□□□□ -0.23
ARFGEF1-206ENST00000519436 RAB4AP20338 218 aa13.63□□□□□ -0.23
ARFGEF1-206ENST00000519436 BORCS7Q96B45 105 aa13.63□□□□□ -0.23
ARFGEF1-206ENST00000519436 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.63□□□□□ -0.23
ARFGEF1-206ENST00000519436 LRP1Q07954 4544 aaKnown RBP13.62□□□□□ -0.23
ARFGEF1-206ENST00000519436 hDV102S1A0JD36 115 aa13.62□□□□□ -0.23
ARFGEF1-206ENST00000519436 APCSP02743 223 aa13.62□□□□□ -0.23
ARFGEF1-206ENST00000519436 FGF6P10767 208 aa13.62□□□□□ -0.23
ARFGEF1-206ENST00000519436 ESDP10768 282 aa13.62□□□□□ -0.23
ARFGEF1-206ENST00000519436 POLR2KP53803 58 aaKnown RBP13.62□□□□□ -0.23
ARFGEF1-206ENST00000519436 ISOC2Q96AB3 205 aa13.62□□□□□ -0.23
ARFGEF1-206ENST00000519436 GAGE12HA6NDE8 117 aa13.61□□□□□ -0.23
ARFGEF1-206ENST00000519436 TSHBP01222 138 aa13.61□□□□□ -0.23
ARFGEF1-206ENST00000519436 PMCHP20382 165 aa13.61□□□□□ -0.23
ARFGEF1-206ENST00000519436 RPS10P46783 165 aaKnown RBP13.61□□□□□ -0.23
ARFGEF1-206ENST00000519436 RPL23P62829 140 aaKnown RBP13.61□□□□□ -0.23
ARFGEF1-206ENST00000519436 TMEM241Q24JQ0 296 aa13.61□□□□□ -0.23
ARFGEF1-206ENST00000519436 FAM74A3Q4VXF1 159 aa13.61□□□□□ -0.23
ARFGEF1-206ENST00000519436 NUP35Q8NFH5 326 aa13.61□□□□□ -0.23
ARFGEF1-206ENST00000519436 KRTAP29-1A8MX34 341 aaPredicted RBP13.6□□□□□ -0.23
ARFGEF1-206ENST00000519436 AMMECR1LQ6DCA0 310 aa13.6□□□□□ -0.23
ARFGEF1-206ENST00000519436 AMN1Q8IY45 258 aa13.6□□□□□ -0.23
ARFGEF1-206ENST00000519436 C15orf56Q8N910 161 aa13.6□□□□□ -0.23
ARFGEF1-206ENST00000519436 ST20Q9HBF5 79 aa13.6□□□□□ -0.23
ARFGEF1-206ENST00000519436 IGKV3OR2-268A0A0C4DH90 116 aa13.59□□□□□ -0.23
ARFGEF1-206ENST00000519436 SRSF3P84103 164 aaKnown RBP13.59□□□□□ -0.23
ARFGEF1-206ENST00000519436 CIRBPQ14011 172 aaKnown RBP13.59□□□□□ -0.23
ARFGEF1-206ENST00000519436 RNASEKQ6P5S7 137 aaKnown RBP13.59□□□□□ -0.23
ARFGEF1-206ENST00000519436 MRAP2Q96G30 205 aa13.59□□□□□ -0.23
ARFGEF1-206ENST00000519436 FAT3Q8TDW7 4589 aa13.59□□□□□ -0.23
ARFGEF1-206ENST00000519436 TRBV27A0A0K0K1C4 114 aa13.58□□□□□ -0.24
ARFGEF1-206ENST00000519436 ZNF25P17030 456 aaPredicted RBP13.58□□□□□ -0.24
ARFGEF1-206ENST00000519436 CHCHD10Q8WYQ3 142 aaPredicted RBP13.58□□□□□ -0.24
ARFGEF1-206ENST00000519436 TMEM242Q9NWH2 141 aa13.58□□□□□ -0.24
ARFGEF1-206ENST00000519436 PKHD1L1Q86WI1 4243 aa13.57□□□□□ -0.24
ARFGEF1-206ENST00000519436 RIGQ13278 110 aa13.57□□□□□ -0.24
ARFGEF1-206ENST00000519436 AP5S1Q9NUS5 200 aa13.57□□□□□ -0.24
ARFGEF1-206ENST00000519436 OR5A1Q8NGJ0 315 aa13.56□□□□□ -0.24
ARFGEF1-206ENST00000519436 CFAP161Q6P656 301 aa13.55□□□□□ -0.24
ARFGEF1-206ENST00000519436 NRACQ8N912 160 aa13.55□□□□□ -0.24
ARFGEF1-206ENST00000519436 NAT8Q9UHE5 227 aa13.55□□□□□ -0.24
ARFGEF1-206ENST00000519436 NAT8BQ9UHF3 227 aa13.55□□□□□ -0.24
ARFGEF1-206ENST00000519436 IGHV3-64A0A075B6Q5 118 aa13.54□□□□□ -0.24
ARFGEF1-206ENST00000519436 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.54□□□□□ -0.24
ARFGEF1-206ENST00000519436 SMIM27A0A1W2PRY6 76 aa13.54□□□□□ -0.24
ARFGEF1-206ENST00000519436 SMKR1H3BMG3 65 aa13.54□□□□□ -0.24
ARFGEF1-206ENST00000519436 J3QL48 77 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms