RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 COL8A2P25067 703 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 RPL28P46779 137 aaKnown RBP1.89□□□□□ -2.11
VPS13B-207ENST00000518569 HINT1P49773 126 aaPredicted RBP1.89□□□□□ -2.11
VPS13B-207ENST00000518569 SUPT4H1P63272 117 aaKnown RBP1.89□□□□□ -2.11
VPS13B-207ENST00000518569 ZNF345Q14585 488 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 KISS1Q15726 138 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 ESRGQ1W209 222 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 ZNF660Q6AZW8 331 aaPredicted RBP1.89□□□□□ -2.11
VPS13B-207ENST00000518569 HEPN1Q6WQI6 88 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 COMMD6Q7Z4G1 85 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 ST20-AS1Q8NBB2 130 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 DYNLRB2Q8TF09 96 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 TRGV9Q99603 122 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 NABP2Q9BQ15 211 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 MRPL35Q9NZE8 188 aaKnown RBP1.89□□□□□ -2.11
VPS13B-207ENST00000518569 CNOT1A5YKK6 2376 aaKnown RBP1.89□□□□□ -2.11
VPS13B-207ENST00000518569 IGSF10Q6WRI0 2623 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 WDFY3Q8IZQ1 3526 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 DOCK8Q8NF50 2099 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 SIPA1L1O43166 1804 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 CFAP46Q8IYW2 2715 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 SPAG17Q6Q759 2223 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 COL12A1Q99715 3063 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 A0A0B4J2C4 111 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 A0A1W2PPM0 123 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 HMSDA8MTL9 139 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 H7C2G1 150 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 GNRH2O43555 120 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 IGLV7-43P04211 117 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 TDRG1Q3Y452 100 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 LGALSLQ3ZCW2 172 aaPredicted RBP1.88□□□□□ -2.11
VPS13B-207ENST00000518569 CASC2Q6XLA1 102 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 Q6ZS52 159 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 C2orf91Q6ZV80 131 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 C3orf56Q8N813 242 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 OR8B3Q8NGG8 313 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 MUC7Q8TAX7 377 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 FAM213BQ8TBF2 198 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 MUCL1Q96DR8 90 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 TMEM141Q96I45 108 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 OR8B2Q96RD0 313 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 NDUFB11Q9NX14 153 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 FREM2Q5SZK8 3169 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 PATJQ8NI35 1801 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 OTOGLQ3ZCN5 2332 aa1.88□□□□□ -2.11
VPS13B-207ENST00000518569 MYH4Q9Y623 1939 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 KALRNO60229 2985 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 A0A087WWC5 75 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 CRYM-AS1A6NIL9 109 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 A6NN06 94 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 LHBP01229 141 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 IGHV3-53P01767 116 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 ACYP1P07311 99 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 BAALC-AS2P0C853 105 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 GNG11P61952 73 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 UBE2G1P62253 170 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 MPV17LQ2QL34 196 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 SPATA45Q537H7 98 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 BVES-AS1Q5T3Y7 98 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 FP248Q71RG6 208 aaPredicted RBP1.87□□□□□ -2.11
VPS13B-207ENST00000518569 SERP2Q8N6R1 65 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 Q8N8P6 123 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 DOCK6Q96HP0 2047 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 TEX15Q9BXT5 2789 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 HECTD1Q9ULT8 2610 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 U3KQK5 164 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 MYH6P13533 1939 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 TRIP11Q15643 1979 aa1.87□□□□□ -2.11
VPS13B-207ENST00000518569 ITPR3Q14573 2671 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 NCKAP5O14513 1909 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 GREB1Q4ZG55 1949 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 DENND4CQ5VZ89 1909 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 UTP20O75691 2785 aaKnown RBP1.86□□□□□ -2.11
VPS13B-207ENST00000518569 IGLV3-9A0A075B6K5 115 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 LOC107984156A0A0G2JMH3 177 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 C19orf71A6NCJ1 209 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 IBA57-AS1B1ANH7 110 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 K7EM74 188 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 CRPP02741 224 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 CCKP06307 115 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 SNRPFP62306 86 aaKnown RBP1.86□□□□□ -2.11
VPS13B-207ENST00000518569 RHOHQ15669 191 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 Q1T7F1 81 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 PSMG4Q5JS54 123 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 SLC48A1Q6P1K1 146 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 C2orf82Q6UX34 121 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 ARL17AQ8IVW1 177 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 TMEM105Q8N8V8 129 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 TMEM254Q8TBM7 123 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 C20orf78Q9BR46 151 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 CYP4F30PQ9H0H9 118 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 NXT2Q9NPJ8 142 aaKnown RBP1.86□□□□□ -2.11
VPS13B-207ENST00000518569 HHLA3Q9XRX5 114 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 FAM215AQ9Y5M1 114 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 DOPEY1Q5JWR5 2465 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 ZNF462Q96JM2 2506 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 SDK1Q7Z5N4 2213 aa1.86□□□□□ -2.11
VPS13B-207ENST00000518569 PDCD11Q14690 1871 aaKnown RBP1.86□□□□□ -2.11
VPS13B-207ENST00000518569 IGHV3OR16-8A0A075B7F1 116 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 TRAV3A0A0B4J244 114 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms