RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 Q9H8V8 135 aa8.22□□□□□ -1.09
PCDHGA1-202ENST00000517417 MDFICQ9P1T7 246 aa8.22□□□□□ -1.09
PCDHGA1-202ENST00000517417 IGLV10-54A0A075B6I4 117 aa8.21□□□□□ -1.09
PCDHGA1-202ENST00000517417 K7EMT4 169 aa8.21□□□□□ -1.1
PCDHGA1-202ENST00000517417 HHLA3Q9XRX5 114 aa8.21□□□□□ -1.1
PCDHGA1-202ENST00000517417 ODF3BA8MYP8 253 aa8.21□□□□□ -1.1
PCDHGA1-202ENST00000517417 FOXI1Q12951 378 aa8.21□□□□□ -1.1
PCDHGA1-202ENST00000517417 SMIM20Q8N5G0 67 aa8.21□□□□□ -1.1
PCDHGA1-202ENST00000517417 CLUHP3Q96NS8 147 aa8.21□□□□□ -1.1
PCDHGA1-202ENST00000517417 A6NDX4 124 aa8.2□□□□□ -1.1
PCDHGA1-202ENST00000517417 DEFB4AO15263 64 aa8.2□□□□□ -1.1
PCDHGA1-202ENST00000517417 ADGRG4Q8IZF6 3080 aa8.2□□□□□ -1.1
PCDHGA1-202ENST00000517417 H3BMM0 161 aa8.2□□□□□ -1.1
PCDHGA1-202ENST00000517417 UBE2WQ96B02 151 aa8.2□□□□□ -1.1
PCDHGA1-202ENST00000517417 GYPEP15421 78 aa8.19□□□□□ -1.1
PCDHGA1-202ENST00000517417 C11orf21Q9P2W6 132 aa8.19□□□□□ -1.1
PCDHGA1-202ENST00000517417 PTH2Q96A98 100 aa8.19□□□□□ -1.1
PCDHGA1-202ENST00000517417 DNAJC30Q96LL9 226 aa8.19□□□□□ -1.1
PCDHGA1-202ENST00000517417 SMG1Q96Q15 3661 aaKnown RBP8.19□□□□□ -1.1
PCDHGA1-202ENST00000517417 PTPRBP23467 1997 aa8.19□□□□□ -1.1
PCDHGA1-202ENST00000517417 Q9HAA7 133 aa8.19□□□□□ -1.1
PCDHGA1-202ENST00000517417 C11orf86A6NJI1 115 aa8.18□□□□□ -1.1
PCDHGA1-202ENST00000517417 IGF1P05019 195 aa8.18□□□□□ -1.1
PCDHGA1-202ENST00000517417 NRACQ8N912 160 aa8.18□□□□□ -1.1
PCDHGA1-202ENST00000517417 FLNBO75369 2602 aaKnown RBP8.18□□□□□ -1.1
PCDHGA1-202ENST00000517417 A0A0J9YX75 114 aa8.18□□□□□ -1.1
PCDHGA1-202ENST00000517417 HIST2H2BCQ6DN03 193 aa8.18□□□□□ -1.1
PCDHGA1-202ENST00000517417 CNFNQ9BYD5 112 aa8.18□□□□□ -1.1
PCDHGA1-202ENST00000517417 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
PCDHGA1-202ENST00000517417 EDA2RQ9HAV5 297 aa8.18□□□□□ -1.1
PCDHGA1-202ENST00000517417 TRAV26-1A0A087WT03 109 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 CDSNQ15517 529 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 OVOL2Q9BRP0 275 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 CFC1BP0CG36 223 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 CFC1P0CG37 223 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 HIST2H2BDQ6DRA6 164 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 TEN1Q86WV5 123 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 DAND5Q8N907 189 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 NEXN-AS1Q8NBZ9 246 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 WFDC11Q8NEX6 87 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 OPRPNQ99935 248 aaPredicted RBP8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 C10orf99Q6UWK7 81 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 IGKV2D-24A0A075B6R9 120 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 DEFB135Q30KP9 77 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 NKAPP1Q8N9T2 125 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 ATP6V0E2Q8NHE4 81 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 ZMAT4Q9H898 229 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 SPANXA1Q9NS26 97 aa8.17□□□□□ -1.1
PCDHGA1-202ENST00000517417 CRYBA4P53673 196 aa8.16□□□□□ -1.1
PCDHGA1-202ENST00000517417 CARD19Q96LW7 228 aa8.16□□□□□ -1.1
PCDHGA1-202ENST00000517417 F8WEM9 126 aa8.16□□□□□ -1.1
PCDHGA1-202ENST00000517417 NTN5Q8WTR8 489 aaPredicted RBP8.16□□□□□ -1.1
PCDHGA1-202ENST00000517417 RELNP78509 3460 aa8.16□□□□□ -1.1
PCDHGA1-202ENST00000517417 A4D1N5 150 aa8.15□□□□□ -1.1
PCDHGA1-202ENST00000517417 B5MCH6 92 aa8.15□□□□□ -1.1
PCDHGA1-202ENST00000517417 F8W735 103 aaPredicted RBP8.15□□□□□ -1.1
PCDHGA1-202ENST00000517417 SOCS3O14543 225 aa8.15□□□□□ -1.1
PCDHGA1-202ENST00000517417 IGHG4P01861 327 aa8.15□□□□□ -1.1
PCDHGA1-202ENST00000517417 INSL3P51460 131 aa8.15□□□□□ -1.1
PCDHGA1-202ENST00000517417 C9orf66Q5T8R8 295 aa8.15□□□□□ -1.1
PCDHGA1-202ENST00000517417 CEMP1Q6PRD7 247 aaPredicted RBP8.15□□□□□ -1.1
PCDHGA1-202ENST00000517417 K7EQD1 137 aa8.15□□□□□ -1.1
PCDHGA1-202ENST00000517417 ANKRD29Q8N6D5 301 aa8.15□□□□□ -1.1
PCDHGA1-202ENST00000517417 TINCRA0A1B0GVN0 87 aa8.15□□□□□ -1.11
PCDHGA1-202ENST00000517417 NDUFA11Q86Y39 141 aa8.15□□□□□ -1.11
PCDHGA1-202ENST00000517417 LRRC75A-AS1Q8N1F1 130 aa8.15□□□□□ -1.11
PCDHGA1-202ENST00000517417 SLC25A29Q8N8R3 303 aa8.15□□□□□ -1.11
PCDHGA1-202ENST00000517417 C16orf74Q96GX8 76 aa8.15□□□□□ -1.11
PCDHGA1-202ENST00000517417 TRBV7-3A0A075B6L6 115 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 DNAJC9-AS1A6NH13 148 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 CRLF1O75462 422 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 INAFM2P0DMQ5 153 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 HERV-K104P63124 156 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 COX8CQ7Z4L0 72 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 MUSTN1Q8IVN3 82 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 RNF152Q8N8N0 203 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 C20orf173Q96LM9 149 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 TRAV13-2A0A0B4J235 113 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 TRAV25A0A0B4J276 109 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 TCL1BO95988 128 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 P0DMU3 169 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 FAM231AP0DMU4 169 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 FAM231CP0DMU5 169 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 HAMPP81172 84 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 ATP5G1P05496 136 aa8.14□□□□□ -1.11
PCDHGA1-202ENST00000517417 TRAV4A0A0B4J268 109 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 RS1O15537 224 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 SPART-AS1P0CW21 52 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 PRR9Q5T870 116 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 MT-ATP8P03928 68 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 SPATA25Q9BR10 227 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 IGHV3-30P01768 117 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 IGHV3-33P01772 117 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 IGHV3-30-3P0DP02 117 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 IGHV3-30-5P0DP03 117 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 PLA2G2AP14555 144 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 C11orf71Q6IPW1 123 aa8.13□□□□□ -1.11
PCDHGA1-202ENST00000517417 EBI3Q14213 229 aa8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 CLPSL1A2RUU4 121 aa8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 Q8N6K4 173 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms