RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 NIT2Q9NQR4 276 aa9.33□□□□□ -0.92
SCARNA20.5-201ENST00000516991 PDE6DO43924 150 aa9.32□□□□□ -0.92
SCARNA20.5-201ENST00000516991 AMTP48728 403 aa9.32□□□□□ -0.92
SCARNA20.5-201ENST00000516991 EIF5AL1Q6IS14 154 aaKnown RBP9.32□□□□□ -0.92
SCARNA20.5-201ENST00000516991 IFNA1P01562 189 aa9.31□□□□□ -0.92
SCARNA20.5-201ENST00000516991 SULT1A2P50226 295 aa9.31□□□□□ -0.92
SCARNA20.5-201ENST00000516991 CFAP161Q6P656 301 aa9.31□□□□□ -0.92
SCARNA20.5-201ENST00000516991 CTRLP40313 264 aa9.3□□□□□ -0.92
SCARNA20.5-201ENST00000516991 MEF2BQ02080 365 aaPredicted RBP9.3□□□□□ -0.92
SCARNA20.5-201ENST00000516991 LYZL1Q6UWQ5 148 aa9.3□□□□□ -0.92
SCARNA20.5-201ENST00000516991 SPACA4Q8TDM5 124 aa9.3□□□□□ -0.92
SCARNA20.5-201ENST00000516991 DPH3Q96FX2 82 aa9.3□□□□□ -0.92
SCARNA20.5-201ENST00000516991 GFRA4Q9GZZ7 299 aa9.3□□□□□ -0.92
SCARNA20.5-201ENST00000516991 A0A087WYN8 130 aa9.29□□□□□ -0.92
SCARNA20.5-201ENST00000516991 RAB19A4D1S5 217 aa9.29□□□□□ -0.92
SCARNA20.5-201ENST00000516991 NTF3P20783 257 aa9.29□□□□□ -0.92
SCARNA20.5-201ENST00000516991 MT1HL1P0DM35 61 aa9.28□□□□□ -0.92
SCARNA20.5-201ENST00000516991 C9orf62Q8N4C0 152 aa9.28□□□□□ -0.92
SCARNA20.5-201ENST00000516991 C7orf33Q8WU49 177 aa9.28□□□□□ -0.92
SCARNA20.5-201ENST00000516991 CNFNQ9BYD5 112 aa9.28□□□□□ -0.92
SCARNA20.5-201ENST00000516991 MED9Q9NWA0 146 aa9.28□□□□□ -0.92
SCARNA20.5-201ENST00000516991 TRBV20OR9-2A0A075B6H5 130 aa9.27□□□□□ -0.93
SCARNA20.5-201ENST00000516991 SLPIP03973 132 aa9.27□□□□□ -0.93
SCARNA20.5-201ENST00000516991 CHTF8P0CG12 524 aa9.27□□□□□ -0.93
SCARNA20.5-201ENST00000516991 C15orf56Q8N910 161 aa9.27□□□□□ -0.93
SCARNA20.5-201ENST00000516991 PLAC8Q9NZF1 115 aa9.27□□□□□ -0.93
SCARNA20.5-201ENST00000516991 GAGE12HA6NDE8 117 aa9.26□□□□□ -0.93
SCARNA20.5-201ENST00000516991 NCR2O95944 276 aa9.26□□□□□ -0.93
SCARNA20.5-201ENST00000516991 BCL2P10415 239 aa9.26□□□□□ -0.93
SCARNA20.5-201ENST00000516991 TAGLN2P37802 199 aaKnown RBP9.26□□□□□ -0.93
SCARNA20.5-201ENST00000516991 AMMECR1LQ6DCA0 310 aa9.26□□□□□ -0.93
SCARNA20.5-201ENST00000516991 H7C423 109 aa9.25□□□□□ -0.93
SCARNA20.5-201ENST00000516991 RPS10P46783 165 aaKnown RBP9.25□□□□□ -0.93
SCARNA20.5-201ENST00000516991 TWIST1Q15672 202 aa9.25□□□□□ -0.93
SCARNA20.5-201ENST00000516991 SMIM15Q7Z3B0 74 aa9.25□□□□□ -0.93
SCARNA20.5-201ENST00000516991 NUDT10Q8NFP7 164 aa9.25□□□□□ -0.93
SCARNA20.5-201ENST00000516991 NUDT11Q96G61 164 aa9.25□□□□□ -0.93
SCARNA20.5-201ENST00000516991 RPP21Q9H633 154 aaKnown RBP9.25□□□□□ -0.93
SCARNA20.5-201ENST00000516991 IGKV3OR2-268A0A0C4DH90 116 aa9.24□□□□□ -0.93
SCARNA20.5-201ENST00000516991 NDUFS6O75380 124 aaKnown RBP9.24□□□□□ -0.93
SCARNA20.5-201ENST00000516991 GATD1Q8NB37 220 aa9.24□□□□□ -0.93
SCARNA20.5-201ENST00000516991 PKIGQ9Y2B9 76 aa9.24□□□□□ -0.93
SCARNA20.5-201ENST00000516991 GVQW2A0A096LPI5 108 aaPredicted RBP9.23□□□□□ -0.93
SCARNA20.5-201ENST00000516991 PHOX2AO14813 284 aa9.23□□□□□ -0.93
SCARNA20.5-201ENST00000516991 APCSP02743 223 aa9.23□□□□□ -0.93
SCARNA20.5-201ENST00000516991 HIGD2BQ4VC39 106 aa9.23□□□□□ -0.93
SCARNA20.5-201ENST00000516991 TEX261Q6UWH6 196 aa9.23□□□□□ -0.93
SCARNA20.5-201ENST00000516991 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
SCARNA20.5-201ENST00000516991 TRAV26-2A0A0B4J265 109 aa9.22□□□□□ -0.93
SCARNA20.5-201ENST00000516991 ZNF25P17030 456 aaPredicted RBP9.22□□□□□ -0.93
SCARNA20.5-201ENST00000516991 COX6A2Q02221 97 aa9.22□□□□□ -0.93
SCARNA20.5-201ENST00000516991 RNASEKQ6P5S7 137 aaKnown RBP9.22□□□□□ -0.93
SCARNA20.5-201ENST00000516991 UBR4Q5T4S7 5183 aa9.21□□□□□ -0.93
SCARNA20.5-201ENST00000516991 MAJINQ3KP22 176 aa9.21□□□□□ -0.94
SCARNA20.5-201ENST00000516991 Q6ZNX1 250 aa9.21□□□□□ -0.94
SCARNA20.5-201ENST00000516991 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.2□□□□□ -0.94
SCARNA20.5-201ENST00000516991 IGKV2-24A0A0C4DH68 120 aa9.2□□□□□ -0.94
SCARNA20.5-201ENST00000516991 IGKV2-29A2NJV5 120 aaPredicted RBP9.2□□□□□ -0.94
SCARNA20.5-201ENST00000516991 FGF6P10767 208 aa9.2□□□□□ -0.94
SCARNA20.5-201ENST00000516991 PRSS3P2Q8NHM4 247 aa9.2□□□□□ -0.94
SCARNA20.5-201ENST00000516991 RPL39LQ96EH5 51 aaKnown RBP9.2□□□□□ -0.94
SCARNA20.5-201ENST00000516991 BTF3L4Q96K17 158 aa9.2□□□□□ -0.94
SCARNA20.5-201ENST00000516991 RNASE7Q9H1E1 156 aaKnown RBP9.2□□□□□ -0.94
SCARNA20.5-201ENST00000516991 LINC00474Q9P2X8 69 aa9.2□□□□□ -0.94
SCARNA20.5-201ENST00000516991 SDHAF1A6NFY7 115 aa9.19□□□□□ -0.94
SCARNA20.5-201ENST00000516991 K7EN84 100 aa9.19□□□□□ -0.94
SCARNA20.5-201ENST00000516991 PRR3P79522 188 aaKnown RBP9.19□□□□□ -0.94
SCARNA20.5-201ENST00000516991 SLC51BQ86UW2 128 aa9.19□□□□□ -0.94
SCARNA20.5-201ENST00000516991 OR5A1Q8NGJ0 315 aa9.19□□□□□ -0.94
SCARNA20.5-201ENST00000516991 TMEM101Q96IK0 257 aa9.19□□□□□ -0.94
SCARNA20.5-201ENST00000516991 FAM210AQ96ND0 272 aa9.19□□□□□ -0.94
SCARNA20.5-201ENST00000516991 FOXI1Q12951 378 aa9.18□□□□□ -0.94
SCARNA20.5-201ENST00000516991 STPG4Q8N801 248 aa9.18□□□□□ -0.94
SCARNA20.5-201ENST00000516991 OCC1Q8TAD7 63 aa9.18□□□□□ -0.94
SCARNA20.5-201ENST00000516991 GTSF1Q8WW33 167 aa9.18□□□□□ -0.94
SCARNA20.5-201ENST00000516991 IGHV1-58A0A0C4DH39 117 aa9.17□□□□□ -0.94
SCARNA20.5-201ENST00000516991 TRBV6-5A0A0K0K1A5 114 aa9.17□□□□□ -0.94
SCARNA20.5-201ENST00000516991 A8MWL6 223 aa9.17□□□□□ -0.94
SCARNA20.5-201ENST00000516991 I3L3M4 83 aa9.17□□□□□ -0.94
SCARNA20.5-201ENST00000516991 PMCHP20382 165 aa9.17□□□□□ -0.94
SCARNA20.5-201ENST00000516991 A0A096LNI7 61 aa9.16□□□□□ -0.94
SCARNA20.5-201ENST00000516991 TMEM250H0YL14 139 aa9.16□□□□□ -0.94
SCARNA20.5-201ENST00000516991 GATCO43716 136 aaKnown RBP9.16□□□□□ -0.94
SCARNA20.5-201ENST00000516991 XCL1P47992 114 aa9.16□□□□□ -0.94
SCARNA20.5-201ENST00000516991 FAM231DQ6ZW35 169 aa9.16□□□□□ -0.94
SCARNA20.5-201ENST00000516991 TCTE3Q8IZS6 198 aa9.16□□□□□ -0.94
SCARNA20.5-201ENST00000516991 BORCS7Q96B45 105 aa9.16□□□□□ -0.94
SCARNA20.5-201ENST00000516991 MRAP2Q96G30 205 aa9.16□□□□□ -0.94
SCARNA20.5-201ENST00000516991 CARD19Q96LW7 228 aa9.16□□□□□ -0.94
SCARNA20.5-201ENST00000516991 LINC01600Q96MT4 127 aa9.16□□□□□ -0.94
SCARNA20.5-201ENST00000516991 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
SCARNA20.5-201ENST00000516991 CCL25O15444 150 aa9.15□□□□□ -0.94
SCARNA20.5-201ENST00000516991 CT83Q5H943 113 aa9.15□□□□□ -0.94
SCARNA20.5-201ENST00000516991 FAM231BA6NCW3 169 aa9.14□□□□□ -0.95
SCARNA20.5-201ENST00000516991 ESDP10768 282 aa9.14□□□□□ -0.95
SCARNA20.5-201ENST00000516991 FOXA3P55318 350 aaPredicted RBP9.14□□□□□ -0.95
SCARNA20.5-201ENST00000516991 SS18Q15532 418 aa9.14□□□□□ -0.95
SCARNA20.5-201ENST00000516991 MRPL52Q86TS9 123 aaKnown RBP9.14□□□□□ -0.95
SCARNA20.5-201ENST00000516991 ST20Q9HBF5 79 aa9.14□□□□□ -0.95
SCARNA20.5-201ENST00000516991 TSHBP01222 138 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms