RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 IFNA1P01562 189 aa5.18□□□□□ -1.58
SCARNA20.3-201ENST00000516913 AKR1C3P42330 323 aa5.18□□□□□ -1.58
SCARNA20.3-201ENST00000516913 KRTAP10-8P60410 259 aa5.18□□□□□ -1.58
SCARNA20.3-201ENST00000516913 MEF2BQ02080 365 aaPredicted RBP5.18□□□□□ -1.58
SCARNA20.3-201ENST00000516913 ELOBQ15370 118 aa5.18□□□□□ -1.58
SCARNA20.3-201ENST00000516913 ZNF56Q15929 161 aa5.18□□□□□ -1.58
SCARNA20.3-201ENST00000516913 SUMO4Q6EEV6 95 aa5.18□□□□□ -1.58
SCARNA20.3-201ENST00000516913 CLRN3Q8NCR9 226 aa5.18□□□□□ -1.58
SCARNA20.3-201ENST00000516913 SMDT1Q9H4I9 107 aa5.18□□□□□ -1.58
SCARNA20.3-201ENST00000516913 MANBALQ9NQG1 85 aa5.18□□□□□ -1.58
SCARNA20.3-201ENST00000516913 PLAC8Q9NZF1 115 aa5.18□□□□□ -1.58
SCARNA20.3-201ENST00000516913 TRBV20OR9-2A0A075B6H5 130 aa5.17□□□□□ -1.58
SCARNA20.3-201ENST00000516913 GAS8-AS1O95177 125 aa5.17□□□□□ -1.58
SCARNA20.3-201ENST00000516913 CXCL1P09341 107 aa5.17□□□□□ -1.58
SCARNA20.3-201ENST00000516913 FOXA3P55318 350 aaPredicted RBP5.17□□□□□ -1.58
SCARNA20.3-201ENST00000516913 UBE2G1P62253 170 aa5.17□□□□□ -1.58
SCARNA20.3-201ENST00000516913 REG3AQ06141 175 aa5.17□□□□□ -1.58
SCARNA20.3-201ENST00000516913 C14orf177Q52M58 125 aa5.17□□□□□ -1.58
SCARNA20.3-201ENST00000516913 Q6ZRU5 148 aa5.17□□□□□ -1.58
SCARNA20.3-201ENST00000516913 BAGE2Q86Y30 109 aa5.17□□□□□ -1.58
SCARNA20.3-201ENST00000516913 NKX6-2Q9C056 277 aaPredicted RBP5.17□□□□□ -1.58
SCARNA20.3-201ENST00000516913 hDV102S1A0JD36 115 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 C7orf77A4D0Y5 90 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 C19orf71A6NCJ1 209 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 ZNF727A8MUV8 499 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 F5H697 171 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 TMEM250H0YL14 139 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 NDUFS6O75380 124 aaKnown RBP5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 CRPP02741 224 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 RPL35P42766 123 aaKnown RBP5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 COX6A2Q02221 97 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 CBLN2Q8IUK8 224 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 C11orf52Q96A22 123 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 LINC00526Q96FQ7 95 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
SCARNA20.3-201ENST00000516913 K7EN84 100 aa5.15□□□□□ -1.59
SCARNA20.3-201ENST00000516913 RPL23P62829 140 aaKnown RBP5.15□□□□□ -1.59
SCARNA20.3-201ENST00000516913 SVBPQ8N300 66 aa5.15□□□□□ -1.59
SCARNA20.3-201ENST00000516913 LINC01600Q96MT4 127 aa5.15□□□□□ -1.59
SCARNA20.3-201ENST00000516913 YPEL4Q96NS1 127 aa5.15□□□□□ -1.59
SCARNA20.3-201ENST00000516913 TRBV25-1A0A075B6N4 114 aa5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 TRAV26-2A0A0B4J265 109 aa5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 A0A1B0GUV1 79 aa5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 FAM231BA6NCW3 169 aa5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 PDE6DO43924 150 aa5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 TAGLN2P37802 199 aaKnown RBP5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 SRSF9Q13242 221 aaKnown RBP eCLIP5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 TMEM241Q24JQ0 296 aa5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 HIGD2BQ4VC39 106 aa5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 SPANXN1Q5VSR9 72 aa5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 OCC1Q8TAD7 63 aa5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 SMIM7Q9BQ49 75 aa5.14□□□□□ -1.59
SCARNA20.3-201ENST00000516913 A0A096LNI7 61 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 IGHV1-24A0A0C4DH33 117 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 GAGE12HA6NDE8 117 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 SNAPINO95295 136 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 PRR3P79522 188 aaKnown RBP5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 LYZL1Q6UWQ5 148 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 LINC01551Q86U37 167 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 GATD1Q8NB37 220 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 ISOC2Q96AB3 205 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 RPL39LQ96EH5 51 aaKnown RBP5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 TCEAL7Q9BRU2 100 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 RPS10P5Q9NQ39 176 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 NAT8Q9UHE5 227 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 MUC17Q685J3 4493 aa5.13□□□□□ -1.59
SCARNA20.3-201ENST00000516913 IGHV3-64A0A075B6Q5 118 aa5.12□□□□□ -1.59
SCARNA20.3-201ENST00000516913 IGKV2-24A0A0C4DH68 120 aa5.12□□□□□ -1.59
SCARNA20.3-201ENST00000516913 COLCA2A8K830 154 aa5.12□□□□□ -1.59
SCARNA20.3-201ENST00000516913 MGPP08493 103 aa5.12□□□□□ -1.59
SCARNA20.3-201ENST00000516913 FOXI1Q12951 378 aa5.12□□□□□ -1.59
SCARNA20.3-201ENST00000516913 CENPWQ5EE01 88 aa5.12□□□□□ -1.59
SCARNA20.3-201ENST00000516913 KCNIP4Q6PIL6 250 aa5.12□□□□□ -1.59
SCARNA20.3-201ENST00000516913 FER1L6-AS1Q8NA97 138 aa5.12□□□□□ -1.59
SCARNA20.3-201ENST00000516913 OR2D3Q8NGH3 330 aa5.12□□□□□ -1.59
SCARNA20.3-201ENST00000516913 TMEM243Q9BU79 118 aa5.12□□□□□ -1.59
SCARNA20.3-201ENST00000516913 TPPP3Q9BW30 176 aa5.12□□□□□ -1.59
SCARNA20.3-201ENST00000516913 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 IGKV3OR2-268A0A0C4DH90 116 aa5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 A0A0J9YXV3 536 aa5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 IGKV2-29A2NJV5 120 aaPredicted RBP5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 NTF3P20783 257 aa5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 RHEBQ15382 184 aa5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 ADIRFQ15847 76 aa5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 RASL11AQ6T310 242 aa5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 GTSF1Q8WW33 167 aa5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 CHCHD10Q8WYQ3 142 aaPredicted RBP5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 RNF185Q96GF1 192 aa5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 AP1S3Q96PC3 154 aa5.11□□□□□ -1.59
SCARNA20.3-201ENST00000516913 GVQW2A0A096LPI5 108 aaPredicted RBP5.1□□□□□ -1.59
SCARNA20.3-201ENST00000516913 TRAV8-4A0A0B4J246 113 aa5.1□□□□□ -1.59
SCARNA20.3-201ENST00000516913 A0A1W2PNN7 141 aa5.1□□□□□ -1.59
SCARNA20.3-201ENST00000516913 P01737 135 aa5.1□□□□□ -1.59
SCARNA20.3-201ENST00000516913 S100A9P06702 114 aaKnown RBP5.1□□□□□ -1.59
SCARNA20.3-201ENST00000516913 MAJINQ3KP22 176 aa5.1□□□□□ -1.59
SCARNA20.3-201ENST00000516913 KRTAP11-1Q8IUC1 163 aa5.1□□□□□ -1.59
SCARNA20.3-201ENST00000516913 NUDT10Q8NFP7 164 aa5.1□□□□□ -1.59
SCARNA20.3-201ENST00000516913 NUDT11Q96G61 164 aa5.1□□□□□ -1.59
SCARNA20.3-201ENST00000516913 PGLYRP4Q96LB8 373 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms