RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 PDE6GP18545 87 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 PSMB8P28062 276 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 HOXD3P31249 432 aaPredicted RBP1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 LINC00315P59091 139 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 SPTBN1Q01082 2364 aaKnown RBP1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 CFHR3Q02985 330 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 LY6DQ14210 128 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 DEFB121Q5J5C9 76 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 LCE2AQ5TA79 106 aaPredicted RBP1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 SMIM20Q8N5G0 67 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 MUC7Q8TAX7 377 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 C16orf74Q96GX8 76 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 TMEM243Q9BU79 118 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 JPT2Q9H910 190 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 PKDREJQ9NTG1 2253 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 PRO0461Q9UI25 63 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 VPREB3Q9UKI3 123 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 CNOT1A5YKK6 2376 aaKnown RBP1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 ACACAQ13085 2346 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 MED13LQ71F56 2210 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 TRGV1A0A0A0MS02 117 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGHV3-73A0A0B4J1V6 119 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 TRAV13-1A0A0B4J241 112 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGHV4-61A0A0C4DH41 118 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 TEX49A0A1B0GTD5 131 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 TRBV6-4A0A1B0GX49 114 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 SMIM9A6NGZ8 99 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 IBA57-AS1B1ANH7 110 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 FAM229AH3BQW9 127 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 ATOX1O00244 68 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 LST1O00453 97 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 NDUFA7O95182 113 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 TRBV12-3P01733 135 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGHV4-59P01825 116 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 MT-ATP8P03928 68 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGHV4-38-2P0DP08 117 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 GNLYP22749 145 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 RPL28P46779 137 aaKnown RBP1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 NPC2P61916 151 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 COX17Q14061 63 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 DEFB114Q30KQ6 69 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 DEFB112Q30KQ8 113 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 BEAN1Q3B7T3 259 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 PRR9Q5T870 116 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 C9orf153Q5TBE3 101 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 GAGE2AQ6NT46 116 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 FAM19A3Q7Z5A8 133 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 ZNF575Q86XF7 245 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 LINC00482Q8N8I6 264 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 DAND5Q8N907 189 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 LINC00308Q8TCZ7 52 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 COX7B2Q8TF08 81 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 C4orf3Q8WVX3 66 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 OPRPNQ99935 248 aaPredicted RBP1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 CHCHD5Q9BSY4 110 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 UBL5Q9BZL1 73 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 Q9H8V8 135 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 SND1-IT1Q9HBX3 110 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 ORMDL1Q9P0S3 153 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 TOMM7Q9P0U1 55 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 UBE2D4Q9Y2X8 147 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 CEP250Q9BV73 2442 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 APC2O95996 2303 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 COL6A6A6NMZ7 2263 aa1.52□□□□□ -2.17
RNU1-40P-201ENST00000516816 RP1L1Q8IWN7 2480 aaPredicted RBP1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 NCOR1O75376 2440 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 SPTA1P02549 2419 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 WDR87Q6ZQQ6 2873 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGHV4-30-2A0A087WSY4 118 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 hADV29S1A0JD25 119 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGKV2-29A2NJV5 120 aaPredicted RBP1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 KNCNA6PVL3 124 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 K7EQD1 137 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 CCL24O00175 119 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 SPRY2O43597 315 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 BCE1O60756 84 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 INSL3P51460 131 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 XGP55808 180 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 HIST1H4AP62805 103 aaKnown RBP1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 RPS28P62857 69 aaKnown RBP1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 KRTAP19-4Q3LI73 84 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 FAM222AQ5U5X8 452 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 ATP5EP2Q5VTU8 51 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 TMEM61Q8N0U2 210 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 LINC01561Q8N1V8 128 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 C3orf22Q8N5N4 141 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 KIR2DL5BQ8NHK3 375 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 DEFB104AQ8WTQ1 72 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 DSCR8Q96T75 97 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 CHCHD7Q9BUK0 85 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 CDC42SE2Q9NRR3 84 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 XCL2Q9UBD3 114 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 CDKN2A-AS1Q9UH64 79 aa1.51□□□□□ -2.17
RNU1-40P-201ENST00000516816 CHD7Q9P2D1 2997 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 CACNA1BQ00975 2339 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 SORL1Q92673 2214 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGLV5-45A0A087WSX0 123 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGHV3-38A0A0C4DH36 116 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms