RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 HSD11B1P28845 292 aa-2.3□□□□□ -2.78
RNU6-561P-201ENST00000516222 CCL18P55774 89 aa-2.3□□□□□ -2.78
RNU6-561P-201ENST00000516222 TCTAP57738 103 aa-2.3□□□□□ -2.78
RNU6-561P-201ENST00000516222 RGS21Q2M5E4 152 aa-2.3□□□□□ -2.78
RNU6-561P-201ENST00000516222 CCDC32Q9BV29 185 aa-2.3□□□□□ -2.78
RNU6-561P-201ENST00000516222 MED31Q9Y3C7 131 aa-2.3□□□□□ -2.78
RNU6-561P-201ENST00000516222 ANKRD11Q6UB99 2663 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-561P-201ENST00000516222 ADCY9O60503 1353 aa-2.31□□□□□ -2.78
RNU6-561P-201ENST00000516222 A6NIN4 97 aa-2.31□□□□□ -2.78
RNU6-561P-201ENST00000516222 PIPP12273 146 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-561P-201ENST00000516222 TMEM170BQ5T4T1 132 aa-2.31□□□□□ -2.78
RNU6-561P-201ENST00000516222 ATP11AUNQ6ZP68 121 aa-2.31□□□□□ -2.78
RNU6-561P-201ENST00000516222 TMED4Q7Z7H5 227 aa-2.31□□□□□ -2.78
RNU6-561P-201ENST00000516222 ADGRB1O14514 1584 aa-2.32□□□□□ -2.78
RNU6-561P-201ENST00000516222 POLA1P09884 1462 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-561P-201ENST00000516222 DNAH9Q9NYC9 4486 aa-2.32□□□□□ -2.78
RNU6-561P-201ENST00000516222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.32□□□□□ -2.78
RNU6-561P-201ENST00000516222 GNG3P63215 75 aa-2.32□□□□□ -2.78
RNU6-561P-201ENST00000516222 DHRS4L2Q6PKH6 230 aa-2.32□□□□□ -2.78
RNU6-561P-201ENST00000516222 APLNQ9ULZ1 77 aa-2.32□□□□□ -2.78
RNU6-561P-201ENST00000516222 ACACAQ13085 2346 aa-2.33□□□□□ -2.78
RNU6-561P-201ENST00000516222 M0R135 149 aa-2.33□□□□□ -2.78
RNU6-561P-201ENST00000516222 DEFA5Q01523 94 aa-2.33□□□□□ -2.78
RNU6-561P-201ENST00000516222 C9orf116Q5BN46 136 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-561P-201ENST00000516222 HRCT1Q6UXD1 115 aa-2.33□□□□□ -2.78
RNU6-561P-201ENST00000516222 ZNF818PQ6ZRF7 136 aa-2.33□□□□□ -2.78
RNU6-561P-201ENST00000516222 C10orf82Q8WW14 230 aa-2.33□□□□□ -2.78
RNU6-561P-201ENST00000516222 NDUFA12Q9UI09 145 aa-2.33□□□□□ -2.78
RNU6-561P-201ENST00000516222 STOML2Q9UJZ1 356 aa-2.33□□□□□ -2.78
RNU6-561P-201ENST00000516222 PLECQ15149 4684 aaKnown RBP-2.33□□□□□ -2.78
RNU6-561P-201ENST00000516222 DOCK1Q14185 1865 aa-2.33□□□□□ -2.78
RNU6-561P-201ENST00000516222 KIAA0556O60303 1618 aa-2.34□□□□□ -2.78
RNU6-561P-201ENST00000516222 ZZEF1O43149 2961 aa-2.34□□□□□ -2.78
RNU6-561P-201ENST00000516222 SPANXN1Q5VSR9 72 aa-2.34□□□□□ -2.78
RNU6-561P-201ENST00000516222 USMG5Q96IX5 58 aa-2.34□□□□□ -2.78
RNU6-561P-201ENST00000516222 TRAPPC2LQ9UL33 140 aa-2.34□□□□□ -2.78
RNU6-561P-201ENST00000516222 KNL1Q8NG31 2342 aa-2.34□□□□□ -2.78
RNU6-561P-201ENST00000516222 MGAM2Q2M2H8 2515 aa-2.34□□□□□ -2.78
RNU6-561P-201ENST00000516222 MUC22E2RYF6 1773 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-561P-201ENST00000516222 SMIM24O75264 130 aa-2.35□□□□□ -2.79
RNU6-561P-201ENST00000516222 LINC01545Q5VT33 79 aa-2.35□□□□□ -2.79
RNU6-561P-201ENST00000516222 DCUN1D2Q6PH85 259 aa-2.35□□□□□ -2.79
RNU6-561P-201ENST00000516222 VSTM2AQ8TAG5 236 aa-2.35□□□□□ -2.79
RNU6-561P-201ENST00000516222 CALML5Q9NZT1 146 aa-2.35□□□□□ -2.79
RNU6-561P-201ENST00000516222 PXDNQ92626 1479 aa-2.35□□□□□ -2.79
RNU6-561P-201ENST00000516222 MYOM3Q5VTT5 1437 aa-2.35□□□□□ -2.79
RNU6-561P-201ENST00000516222 VPS13BQ7Z7G8 4022 aa-2.35□□□□□ -2.79
RNU6-561P-201ENST00000516222 SBF2Q86WG5 1849 aa-2.35□□□□□ -2.79
RNU6-561P-201ENST00000516222 PRDM2Q13029 1718 aa-2.36□□□□□ -2.79
RNU6-561P-201ENST00000516222 TRBV7-4A0A0J9YYF1 115 aa-2.36□□□□□ -2.79
RNU6-561P-201ENST00000516222 E7EQ34 232 aa-2.36□□□□□ -2.79
RNU6-561P-201ENST00000516222 NIPSNAP2O75323 286 aa-2.36□□□□□ -2.79
RNU6-561P-201ENST00000516222 PPP1R17O96001 155 aa-2.36□□□□□ -2.79
RNU6-561P-201ENST00000516222 REEP5Q00765 189 aa-2.36□□□□□ -2.79
RNU6-561P-201ENST00000516222 SMIM20Q8N5G0 67 aa-2.36□□□□□ -2.79
RNU6-561P-201ENST00000516222 DNAJC15Q9Y5T4 150 aa-2.36□□□□□ -2.79
RNU6-561P-201ENST00000516222 DSPP15924 2871 aaKnown RBP-2.36□□□□□ -2.79
RNU6-561P-201ENST00000516222 DMXL1Q9Y485 3027 aa-2.36□□□□□ -2.79
RNU6-561P-201ENST00000516222 SLIT1O75093 1534 aa-2.37□□□□□ -2.79
RNU6-561P-201ENST00000516222 SCIMPQ6UWF3 145 aa-2.37□□□□□ -2.79
RNU6-561P-201ENST00000516222 NAA60Q9H7X0 242 aa-2.37□□□□□ -2.79
RNU6-561P-201ENST00000516222 DAPK1P53355 1430 aa-2.37□□□□□ -2.79
RNU6-561P-201ENST00000516222 MYH3P11055 1940 aa-2.37□□□□□ -2.79
RNU6-561P-201ENST00000516222 ADAMTS12P58397 1594 aa-2.37□□□□□ -2.79
RNU6-561P-201ENST00000516222 COL4A6Q14031 1691 aa-2.37□□□□□ -2.79
RNU6-561P-201ENST00000516222 PTPN23Q9H3S7 1636 aa-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 MYH8P13535 1937 aa-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 CPSF4LA6NMK7 179 aaKnown RBP-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 H3BNG1 76 aa-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 PITX3O75364 302 aa-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 HLA-DRB4P13762 266 aa-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 RPL7P18124 248 aaKnown RBP-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 CLLU1Q5K131 121 aa-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 STX12Q86Y82 276 aa-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 LINC00312Q9Y6C7 94 aa-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 HLA-DRB4X5D2U9 266 aa-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 WDR87Q6ZQQ6 2873 aa-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 ARHGEF12Q9NZN5 1544 aa-2.38□□□□□ -2.79
RNU6-561P-201ENST00000516222 CTXN2P0C2S0 81 aa-2.39□□□□□ -2.79
RNU6-561P-201ENST00000516222 POLR2HP52434 150 aaKnown RBP-2.39□□□□□ -2.79
RNU6-561P-201ENST00000516222 H1FX-AS1Q4G0G2 97 aa-2.39□□□□□ -2.79
RNU6-561P-201ENST00000516222 THEM6Q8WUY1 208 aa-2.39□□□□□ -2.79
RNU6-561P-201ENST00000516222 CCDC115Q96NT0 180 aa-2.39□□□□□ -2.79
RNU6-561P-201ENST00000516222 PARVGQ9HBI0 331 aa-2.39□□□□□ -2.79
RNU6-561P-201ENST00000516222 KALRNO60229 2985 aa-2.4□□□□□ -2.79
RNU6-561P-201ENST00000516222 SETBP1Q9Y6X0 1596 aa-2.4□□□□□ -2.79
RNU6-561P-201ENST00000516222 TROQ12816 1431 aaPredicted RBP-2.4□□□□□ -2.79
RNU6-561P-201ENST00000516222 TULP4Q9NRJ4 1543 aa-2.4□□□□□ -2.79
RNU6-561P-201ENST00000516222 SSSCA1O60232 199 aa-2.4□□□□□ -2.79
RNU6-561P-201ENST00000516222 SERPINB1P30740 379 aa-2.4□□□□□ -2.79
RNU6-561P-201ENST00000516222 S100A5P33763 92 aa-2.4□□□□□ -2.79
RNU6-561P-201ENST00000516222 MRPS25P82663 173 aaKnown RBP-2.4□□□□□ -2.79
RNU6-561P-201ENST00000516222 MAGOHBQ96A72 148 aaKnown RBP-2.4□□□□□ -2.79
RNU6-561P-201ENST00000516222 LYSTQ99698 3801 aa-2.4□□□□□ -2.79
RNU6-561P-201ENST00000516222 V9GYH0 126 aa-2.4□□□□□ -2.79
RNU6-561P-201ENST00000516222 RIF1Q5UIP0 2472 aaKnown RBP-2.41□□□□□ -2.79
RNU6-561P-201ENST00000516222 APOC3P02656 99 aa-2.41□□□□□ -2.8
RNU6-561P-201ENST00000516222 PPP1R2P3Q6NXS1 205 aa-2.41□□□□□ -2.8
RNU6-561P-201ENST00000516222 CTAGE3PQ8IX95 158 aa-2.41□□□□□ -2.8
RNU6-561P-201ENST00000516222 BANF2Q9H503 90 aa-2.41□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms