RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 PRSS3P2Q8NHM4 247 aa4.87□□□□□ -1.63
SCARNA6-201ENST00000515982 UPK3BQ9BT76 320 aa4.87□□□□□ -1.63
SCARNA6-201ENST00000515982 SMIM2Q9BVW6 85 aa4.87□□□□□ -1.63
SCARNA6-201ENST00000515982 NXT2Q9NPJ8 142 aaKnown RBP4.87□□□□□ -1.63
SCARNA6-201ENST00000515982 MRPS16Q9Y3D3 137 aaKnown RBP4.87□□□□□ -1.63
SCARNA6-201ENST00000515982 LINC00588Q9Y4M8 146 aa4.87□□□□□ -1.63
SCARNA6-201ENST00000515982 H7C423 109 aa4.86□□□□□ -1.63
SCARNA6-201ENST00000515982 AMTP48728 403 aa4.86□□□□□ -1.63
SCARNA6-201ENST00000515982 RAB5BP61020 215 aa4.86□□□□□ -1.63
SCARNA6-201ENST00000515982 SMAGPQ0VAQ4 97 aa4.86□□□□□ -1.63
SCARNA6-201ENST00000515982 TMEM18Q96B42 140 aa4.86□□□□□ -1.63
SCARNA6-201ENST00000515982 TMEM243Q9BU79 118 aa4.86□□□□□ -1.63
SCARNA6-201ENST00000515982 Q9H8V8 135 aa4.86□□□□□ -1.63
SCARNA6-201ENST00000515982 IGLV2-18A0A075B6J9 118 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 TRAV9-2A0A087WT02 112 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 TMEM262E9PQX1 116 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 K7EP13 123 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 UBE2L6O14933 153 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 SIVA1O15304 175 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 LY6G6CO95867 125 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 TSHBP01222 138 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 LINC00614P0C842 121 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 IFI27P40305 119 aaPredicted RBP4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 LAGE3Q14657 143 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 ORMDL2Q53FV1 153 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 NTM-AS1Q6ZSK4 140 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 FA2HQ7L5A8 372 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 CHCHD5Q9BSY4 110 aa4.85□□□□□ -1.63
SCARNA6-201ENST00000515982 HERC2O95714 4834 aa4.84□□□□□ -1.63
SCARNA6-201ENST00000515982 A0A087WX48 190 aa4.84□□□□□ -1.63
SCARNA6-201ENST00000515982 LINC01549A6NIU2 74 aa4.84□□□□□ -1.63
SCARNA6-201ENST00000515982 C1orf196B1AJZ1 125 aa4.84□□□□□ -1.63
SCARNA6-201ENST00000515982 ESDP10768 282 aa4.84□□□□□ -1.63
SCARNA6-201ENST00000515982 Q0VG73 95 aa4.84□□□□□ -1.63
SCARNA6-201ENST00000515982 NIT1Q86X76 327 aa4.84□□□□□ -1.63
SCARNA6-201ENST00000515982 BAGE3Q86Y29 109 aa4.84□□□□□ -1.63
SCARNA6-201ENST00000515982 C18orf32Q8TCD1 76 aa4.84□□□□□ -1.63
SCARNA6-201ENST00000515982 LINC00476Q8WZB0 136 aa4.84□□□□□ -1.63
SCARNA6-201ENST00000515982 CHCHD7Q9BUK0 85 aa4.84□□□□□ -1.63
SCARNA6-201ENST00000515982 LYSTQ99698 3801 aa4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 A0A1B0GUV1 79 aa4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 DNAH10OSP0CZ25 163 aa4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 GAGE6Q13070 117 aa4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 LINC01556Q5JQF7 62 aa4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 AMMECR1LQ6DCA0 310 aa4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 DGAT2L7PQ6IED9 249 aa4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 C20orf203Q8NBC4 194 aa4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 DEFB104AQ8WTQ1 72 aa4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 CHCHD1Q96BP2 118 aaKnown RBP4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 AP5S1Q9NUS5 200 aa4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 CSMD3Q7Z407 3707 aa4.83□□□□□ -1.64
SCARNA6-201ENST00000515982 LINC01546A6NGU7 62 aa4.82□□□□□ -1.64
SCARNA6-201ENST00000515982 ZNF25P17030 456 aaPredicted RBP4.82□□□□□ -1.64
SCARNA6-201ENST00000515982 TTC32Q5I0X7 151 aa4.82□□□□□ -1.64
SCARNA6-201ENST00000515982 RNASEKQ6P5S7 137 aaKnown RBP4.82□□□□□ -1.64
SCARNA6-201ENST00000515982 WFDC10BQ8IUB3 73 aa4.82□□□□□ -1.64
SCARNA6-201ENST00000515982 C10orf126Q8N4M7 172 aa4.82□□□□□ -1.64
SCARNA6-201ENST00000515982 TMEM101Q96IK0 257 aa4.82□□□□□ -1.64
SCARNA6-201ENST00000515982 TIMM21Q9BVV7 248 aa4.82□□□□□ -1.64
SCARNA6-201ENST00000515982 CYSLTR1Q9Y271 337 aa4.82□□□□□ -1.64
SCARNA6-201ENST00000515982 CSDC2Q9Y534 153 aaKnown RBP4.82□□□□□ -1.64
SCARNA6-201ENST00000515982 PCLOQ9Y6V0 5065 aa4.82□□□□□ -1.64
SCARNA6-201ENST00000515982 RYR1P21817 5038 aa4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 IGKV2-29A2NJV5 120 aaPredicted RBP4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 IGHV3-30P01768 117 aa4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 IGHV3-33P01772 117 aa4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 IGHV3-30-3P0DP02 117 aa4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 IGHV3-30-5P0DP03 117 aa4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 FGF6P10767 208 aa4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 BTF3P20290 206 aaKnown RBP4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 RBX1P62877 108 aa4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 MRPL52Q86TS9 123 aaKnown RBP4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 OR5A1Q8NGJ0 315 aa4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
SCARNA6-201ENST00000515982 STARD9Q9P2P6 4700 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 NBDYA0A0U1RRE5 68 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 IBA57-AS1B1ANH7 110 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HIST1H2BKO60814 126 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HSBP1O75506 76 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 ANGP03950 147 aaKnown RBP4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HIST1H2BJP06899 126 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 NPSP0C0P6 89 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HIST1H2BOP23527 126 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HIST1H2BBP33778 126 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HIST1H2BDP58876 126 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HIST1H2BCP62807 126 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HIST2H2BEQ16778 126 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 PAPPA-AS1Q5QFB9 102 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 C2orf66Q6UXQ4 117 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HIST1H2BHQ93079 126 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HIST1H2BNQ99877 126 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 HIST1H2BMQ99879 126 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 SPANXA1Q9NS26 97 aa4.8□□□□□ -1.64
SCARNA6-201ENST00000515982 TRAV8-3A0A0A6YYJ7 113 aa4.79□□□□□ -1.64
SCARNA6-201ENST00000515982 HBDP02042 147 aa4.79□□□□□ -1.64
SCARNA6-201ENST00000515982 RPL39P62891 51 aaKnown RBP4.79□□□□□ -1.64
SCARNA6-201ENST00000515982 MRPS36P82909 103 aaKnown RBP4.79□□□□□ -1.64
SCARNA6-201ENST00000515982 MPV17L2Q567V2 206 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms