RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 NCR2O95944 276 aa8.46□□□□□ -1.06
CLCN3-210ENST00000515420 GCSHP23434 173 aa8.46□□□□□ -1.06
CLCN3-210ENST00000515420 RBX1P62877 108 aa8.46□□□□□ -1.06
CLCN3-210ENST00000515420 RIGQ13278 110 aa8.46□□□□□ -1.06
CLCN3-210ENST00000515420 ENHOQ6UWT2 76 aa8.46□□□□□ -1.06
CLCN3-210ENST00000515420 MAPKAPK5-AS1Q8N8E1 139 aa8.46□□□□□ -1.06
CLCN3-210ENST00000515420 NUP35Q8NFH5 326 aa8.46□□□□□ -1.06
CLCN3-210ENST00000515420 C1orf43Q9BWL3 253 aa8.46□□□□□ -1.06
CLCN3-210ENST00000515420 SMIM27A0A1W2PRY6 76 aa8.45□□□□□ -1.06
CLCN3-210ENST00000515420 GAGE6Q13070 117 aa8.45□□□□□ -1.06
CLCN3-210ENST00000515420 Q8N976 141 aa8.45□□□□□ -1.06
CLCN3-210ENST00000515420 MRAP2Q96G30 205 aa8.45□□□□□ -1.06
CLCN3-210ENST00000515420 HSPG2P98160 4391 aa8.45□□□□□ -1.06
CLCN3-210ENST00000515420 A0A1B0GW15 77 aa8.44□□□□□ -1.06
CLCN3-210ENST00000515420 SDHAF1A6NFY7 115 aa8.44□□□□□ -1.06
CLCN3-210ENST00000515420 AMTP48728 403 aa8.44□□□□□ -1.06
CLCN3-210ENST00000515420 WFDC2Q14508 124 aa8.44□□□□□ -1.06
CLCN3-210ENST00000515420 RPL39LQ96EH5 51 aaKnown RBP8.44□□□□□ -1.06
CLCN3-210ENST00000515420 H7C423 109 aa8.43□□□□□ -1.06
CLCN3-210ENST00000515420 UBE2L6O14933 153 aa8.43□□□□□ -1.06
CLCN3-210ENST00000515420 RAB4AP20338 218 aa8.43□□□□□ -1.06
CLCN3-210ENST00000515420 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLCN3-210ENST00000515420 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
CLCN3-210ENST00000515420 C14orf177Q52M58 125 aa8.43□□□□□ -1.06
CLCN3-210ENST00000515420 LINC00269Q8N2A0 174 aa8.43□□□□□ -1.06
CLCN3-210ENST00000515420 BAALCQ8WXS3 180 aa8.43□□□□□ -1.06
CLCN3-210ENST00000515420 RNF185Q96GF1 192 aa8.43□□□□□ -1.06
CLCN3-210ENST00000515420 APOBP04114 4563 aaKnown RBP8.42□□□□□ -1.06
CLCN3-210ENST00000515420 PPP1R17O96001 155 aa8.42□□□□□ -1.06
CLCN3-210ENST00000515420 REG3AQ06141 175 aa8.42□□□□□ -1.06
CLCN3-210ENST00000515420 PNRC1Q12796 327 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-210ENST00000515420 CLLU1Q5K131 121 aa8.42□□□□□ -1.06
CLCN3-210ENST00000515420 Q8N1X5 172 aa8.42□□□□□ -1.06
CLCN3-210ENST00000515420 C20orf203Q8NBC4 194 aa8.42□□□□□ -1.06
CLCN3-210ENST00000515420 TMEM70Q9BUB7 260 aa8.42□□□□□ -1.06
CLCN3-210ENST00000515420 ST20Q9HBF5 79 aa8.42□□□□□ -1.06
CLCN3-210ENST00000515420 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
CLCN3-210ENST00000515420 I3L3M4 83 aa8.41□□□□□ -1.06
CLCN3-210ENST00000515420 PPP1R2P9O14990 202 aa8.41□□□□□ -1.06
CLCN3-210ENST00000515420 APCSP02743 223 aa8.41□□□□□ -1.06
CLCN3-210ENST00000515420 AMN1Q8IY45 258 aa8.41□□□□□ -1.06
CLCN3-210ENST00000515420 PCLOQ9Y6V0 5065 aa8.4□□□□□ -1.06
CLCN3-210ENST00000515420 IGLV4-60A0A075B6I1 120 aa8.4□□□□□ -1.06
CLCN3-210ENST00000515420 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.06
CLCN3-210ENST00000515420 LECT2O14960 151 aa8.4□□□□□ -1.06
CLCN3-210ENST00000515420 S100A8P05109 93 aa8.4□□□□□ -1.06
CLCN3-210ENST00000515420 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.06
CLCN3-210ENST00000515420 FAM104BQ5XKR9 115 aa8.4□□□□□ -1.06
CLCN3-210ENST00000515420 LINC00862A6NCI5 91 aa8.39□□□□□ -1.07
CLCN3-210ENST00000515420 J3QL48 77 aa8.39□□□□□ -1.07
CLCN3-210ENST00000515420 ZNF25P17030 456 aaPredicted RBP8.39□□□□□ -1.07
CLCN3-210ENST00000515420 PMCHP20382 165 aa8.39□□□□□ -1.07
CLCN3-210ENST00000515420 XGP55808 180 aa8.39□□□□□ -1.07
CLCN3-210ENST00000515420 KRTAP26-1Q6PEX3 210 aa8.39□□□□□ -1.07
CLCN3-210ENST00000515420 CLPSL2Q6UWE3 100 aa8.39□□□□□ -1.07
CLCN3-210ENST00000515420 GAS8-AS1O95177 125 aa8.38□□□□□ -1.07
CLCN3-210ENST00000515420 HLA-DQA1P01909 254 aa8.38□□□□□ -1.07
CLCN3-210ENST00000515420 RPS10P46783 165 aaKnown RBP8.38□□□□□ -1.07
CLCN3-210ENST00000515420 HBBP68871 147 aa8.38□□□□□ -1.07
CLCN3-210ENST00000515420 AMMECR1LQ6DCA0 310 aa8.38□□□□□ -1.07
CLCN3-210ENST00000515420 ATP5L2Q7Z4Y8 100 aa8.38□□□□□ -1.07
CLCN3-210ENST00000515420 DEFB104AQ8WTQ1 72 aa8.38□□□□□ -1.07
CLCN3-210ENST00000515420 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-210ENST00000515420 A0A1B0GXF2 115 aa8.37□□□□□ -1.07
CLCN3-210ENST00000515420 USP17L23D6RBM5 183 aa8.37□□□□□ -1.07
CLCN3-210ENST00000515420 F8W036 122 aa8.37□□□□□ -1.07
CLCN3-210ENST00000515420 TSHBP01222 138 aa8.37□□□□□ -1.07
CLCN3-210ENST00000515420 ESDP10768 282 aa8.37□□□□□ -1.07
CLCN3-210ENST00000515420 CAMPP49913 170 aa8.37□□□□□ -1.07
CLCN3-210ENST00000515420 SUMO2P61956 95 aaKnown RBP8.37□□□□□ -1.07
CLCN3-210ENST00000515420 UQCC3Q6UW78 93 aa8.37□□□□□ -1.07
CLCN3-210ENST00000515420 NRACQ8N912 160 aa8.37□□□□□ -1.07
CLCN3-210ENST00000515420 ANAPC16Q96DE5 110 aa8.37□□□□□ -1.07
CLCN3-210ENST00000515420 TRBV24-1A0A075B6N3 115 aa8.36□□□□□ -1.07
CLCN3-210ENST00000515420 VCYO14598 125 aa8.36□□□□□ -1.07
CLCN3-210ENST00000515420 MT-ND4LP03901 98 aa8.36□□□□□ -1.07
CLCN3-210ENST00000515420 FGF6P10767 208 aa8.36□□□□□ -1.07
CLCN3-210ENST00000515420 RPL32P62910 135 aaKnown RBP8.36□□□□□ -1.07
CLCN3-210ENST00000515420 IFITM2Q01629 132 aa8.36□□□□□ -1.07
CLCN3-210ENST00000515420 MRPL51Q4U2R6 128 aaKnown RBP8.36□□□□□ -1.07
CLCN3-210ENST00000515420 Q6ZSA8 131 aa8.36□□□□□ -1.07
CLCN3-210ENST00000515420 CLRN3Q8NCR9 226 aa8.36□□□□□ -1.07
CLCN3-210ENST00000515420 C20orf78Q9BR46 151 aa8.36□□□□□ -1.07
CLCN3-210ENST00000515420 KRTAP17-1Q9BYP8 105 aa8.36□□□□□ -1.07
CLCN3-210ENST00000515420 TMEM242Q9NWH2 141 aa8.36□□□□□ -1.07
CLCN3-210ENST00000515420 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-210ENST00000515420 IGKV2-29A2NJV5 120 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-210ENST00000515420 C7orf77A4D0Y5 90 aa8.35□□□□□ -1.07
CLCN3-210ENST00000515420 TCAPO15273 167 aa8.35□□□□□ -1.07
CLCN3-210ENST00000515420 MRPL54Q6P161 138 aaKnown RBP8.35□□□□□ -1.07
CLCN3-210ENST00000515420 RNASEKQ6P5S7 137 aaKnown RBP8.35□□□□□ -1.07
CLCN3-210ENST00000515420 MRPL52Q86TS9 123 aaKnown RBP8.35□□□□□ -1.07
CLCN3-210ENST00000515420 BTF3L4Q96K17 158 aa8.35□□□□□ -1.07
CLCN3-210ENST00000515420 KIR2DL4Q99706 377 aa8.35□□□□□ -1.07
CLCN3-210ENST00000515420 KRTAP4-5Q9BYR2 181 aa8.35□□□□□ -1.07
CLCN3-210ENST00000515420 IGLV10-54A0A075B6I4 117 aa8.34□□□□□ -1.07
CLCN3-210ENST00000515420 SMKR1H3BMG3 65 aa8.34□□□□□ -1.07
CLCN3-210ENST00000515420 PHOX2AO14813 284 aa8.34□□□□□ -1.07
CLCN3-210ENST00000515420 PPBPP02775 128 aa8.34□□□□□ -1.07
CLCN3-210ENST00000515420 CKS2P33552 79 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms