RNA–Protein interactions for RNA: ENST00000515011.5

PDE4D-223, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,175 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-223ENST00000515011 OPRPNQ99935 248 aaPredicted RBP16.43■□□□□ 0.22
PDE4D-223ENST00000515011 PYGO1Q9Y3Y4 419 aa16.43■□□□□ 0.22
PDE4D-223ENST00000515011 PRADC1Q9BSG0 188 aa16.43■□□□□ 0.22
PDE4D-223ENST00000515011 IGLV4-3A0A075B6K6 122 aa16.42■□□□□ 0.22
PDE4D-223ENST00000515011 EMP1P54849 157 aa16.42■□□□□ 0.22
PDE4D-223ENST00000515011 PLAC8L1A1L4L8 177 aa16.41■□□□□ 0.22
PDE4D-223ENST00000515011 A6NDN8 102 aa16.41■□□□□ 0.22
PDE4D-223ENST00000515011 NSD1Q96L73 2696 aaPredicted RBP16.41■□□□□ 0.22
PDE4D-223ENST00000515011 TRAV4A0A0B4J268 109 aa16.41■□□□□ 0.22
PDE4D-223ENST00000515011 NPSP0C0P6 89 aa16.41■□□□□ 0.22
PDE4D-223ENST00000515011 NFE4Q86UQ8 179 aa16.41■□□□□ 0.22
PDE4D-223ENST00000515011 FN1P02751 2386 aaKnown RBP16.4■□□□□ 0.22
PDE4D-223ENST00000515011 MYMXA0A1B0GTQ4 84 aa16.4■□□□□ 0.22
PDE4D-223ENST00000515011 ZNRF2Q8NHG8 242 aa16.4■□□□□ 0.22
PDE4D-223ENST00000515011 ZNF479Q96JC4 524 aa16.4■□□□□ 0.22
PDE4D-223ENST00000515011 CHCHD7Q9BUK0 85 aa16.4■□□□□ 0.22
PDE4D-223ENST00000515011 INSL3P51460 131 aa16.4■□□□□ 0.22
PDE4D-223ENST00000515011 HERVK_113P61574 105 aa16.4■□□□□ 0.22
PDE4D-223ENST00000515011 NOP10Q9NPE3 64 aaKnown RBP16.4■□□□□ 0.22
PDE4D-223ENST00000515011 C2CD3Q4AC94 2353 aa16.38■□□□□ 0.21
PDE4D-223ENST00000515011 F8P00451 2351 aa16.37■□□□□ 0.21
PDE4D-223ENST00000515011 CRYBA4P53673 196 aa16.37■□□□□ 0.21
PDE4D-223ENST00000515011 COTL1Q14019 142 aa16.37■□□□□ 0.21
PDE4D-223ENST00000515011 RRN3P1Q2M238 152 aa16.37■□□□□ 0.21
PDE4D-223ENST00000515011 FAM104AQ969W3 186 aa16.37■□□□□ 0.21
PDE4D-223ENST00000515011 VCX2Q9H322 139 aa16.37■□□□□ 0.21
PDE4D-223ENST00000515011 TAL2Q16559 108 aa16.37■□□□□ 0.21
PDE4D-223ENST00000515011 C9orf66Q5T8R8 295 aa16.37■□□□□ 0.21
PDE4D-223ENST00000515011 PHLDA1Q8WV24 401 aaPredicted RBP16.37■□□□□ 0.21
PDE4D-223ENST00000515011 NIPBLQ6KC79 2804 aaeCLIP16.36■□□□□ 0.21
PDE4D-223ENST00000515011 TRBV10-1A0A0K0K1A3 114 aa16.36■□□□□ 0.21
PDE4D-223ENST00000515011 AMELXQ99217 191 aa16.36■□□□□ 0.21
PDE4D-223ENST00000515011 OVOL2Q9BRP0 275 aa16.36■□□□□ 0.21
PDE4D-223ENST00000515011 SPANXA1Q9NS26 97 aa16.36■□□□□ 0.21
PDE4D-223ENST00000515011 JMJD1CQ15652 2540 aa16.36■□□□□ 0.21
PDE4D-223ENST00000515011 IGHV3-38A0A0C4DH36 116 aa16.36■□□□□ 0.21
PDE4D-223ENST00000515011 H3BRM9 83 aa16.36■□□□□ 0.21
PDE4D-223ENST00000515011 K7EQD1 137 aa16.36■□□□□ 0.21
PDE4D-223ENST00000515011 GCSHP23434 173 aa16.36■□□□□ 0.21
PDE4D-223ENST00000515011 TMEM170BQ5T4T1 132 aa16.36■□□□□ 0.21
PDE4D-223ENST00000515011 TEP1Q99973 2627 aaKnown RBP16.35■□□□□ 0.21
PDE4D-223ENST00000515011 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.35■□□□□ 0.21
PDE4D-223ENST00000515011 SPATA3Q8NHX4 192 aa16.35■□□□□ 0.21
PDE4D-223ENST00000515011 TM2D2Q9BX73 214 aa16.35■□□□□ 0.21
PDE4D-223ENST00000515011 TRBV7-3A0A075B6L6 115 aa16.34■□□□□ 0.21
PDE4D-223ENST00000515011 FXYD2P54710 66 aa16.34■□□□□ 0.21
PDE4D-223ENST00000515011 CEND1Q8N111 149 aa16.34■□□□□ 0.21
PDE4D-223ENST00000515011 CITED1Q99966 193 aa16.34■□□□□ 0.21
PDE4D-223ENST00000515011 UBE2D4Q9Y2X8 147 aa16.34■□□□□ 0.21
PDE4D-223ENST00000515011 ZNF815PA8K554 130 aa16.33■□□□□ 0.2
PDE4D-223ENST00000515011 UBE2V1Q13404 147 aa16.33■□□□□ 0.2
PDE4D-223ENST00000515011 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.32■□□□□ 0.2
PDE4D-223ENST00000515011 IGKV2-29A2NJV5 120 aaPredicted RBP16.32■□□□□ 0.2
PDE4D-223ENST00000515011 RPL36AP83881 106 aaKnown RBP16.32■□□□□ 0.2
PDE4D-223ENST00000515011 CEMP1Q6PRD7 247 aaPredicted RBP16.32■□□□□ 0.2
PDE4D-223ENST00000515011 RPL36ALQ969Q0 106 aaKnown RBP16.32■□□□□ 0.2
PDE4D-223ENST00000515011 GAGE12BA1L429 117 aa16.31■□□□□ 0.2
PDE4D-223ENST00000515011 CIDEAO60543 219 aa16.31■□□□□ 0.2
PDE4D-223ENST00000515011 GAGE7O76087 117 aa16.31■□□□□ 0.2
PDE4D-223ENST00000515011 GAGE12FP0CL80 117 aa16.31■□□□□ 0.2
PDE4D-223ENST00000515011 GAGE12GP0CL81 117 aa16.31■□□□□ 0.2
PDE4D-223ENST00000515011 GAGE12IP0CL82 117 aa16.31■□□□□ 0.2
PDE4D-223ENST00000515011 VAMP3Q15836 100 aa16.31■□□□□ 0.2
PDE4D-223ENST00000515011 A0A0J9YXV3 536 aa16.31■□□□□ 0.2
PDE4D-223ENST00000515011 SLC25A29Q8N8R3 303 aa16.31■□□□□ 0.2
PDE4D-223ENST00000515011 K7EP13 123 aa16.3■□□□□ 0.2
PDE4D-223ENST00000515011 ZNF22P17026 224 aaPredicted RBP16.3■□□□□ 0.2
PDE4D-223ENST00000515011 TRGV2A0A075B6R0 118 aa16.3■□□□□ 0.2
PDE4D-223ENST00000515011 TMEM223A0PJW6 202 aa16.3■□□□□ 0.2
PDE4D-223ENST00000515011 C9orf118A6NHY6 69 aa16.29■□□□□ 0.2
PDE4D-223ENST00000515011 HIST1H4GQ99525 98 aa16.29■□□□□ 0.2
PDE4D-223ENST00000515011 CCL25O15444 150 aa16.28■□□□□ 0.2
PDE4D-223ENST00000515011 PTTG1IPP53801 180 aa16.28■□□□□ 0.2
PDE4D-223ENST00000515011 TSPEAR-AS2P59090 65 aa16.28■□□□□ 0.2
PDE4D-223ENST00000515011 UBE2D3P61077 147 aa16.28■□□□□ 0.2
PDE4D-223ENST00000515011 UBE2D2P62837 147 aa16.28■□□□□ 0.2
PDE4D-223ENST00000515011 MRPS36P82909 103 aaKnown RBP16.28■□□□□ 0.2
PDE4D-223ENST00000515011 DAZ4Q86SG3 579 aaKnown RBP16.28■□□□□ 0.2
PDE4D-223ENST00000515011 DAZ3Q9NR90 486 aaKnown RBP16.28■□□□□ 0.2
PDE4D-223ENST00000515011 TIMM21Q9BVV7 248 aa16.28■□□□□ 0.2
PDE4D-223ENST00000515011 PLEKHB2Q96CS7 222 aa16.27■□□□□ 0.2
PDE4D-223ENST00000515011 SMIM13P0DJ93 91 aa16.27■□□□□ 0.19
PDE4D-223ENST00000515011 Q6ZUT4 128 aa16.27■□□□□ 0.19
PDE4D-223ENST00000515011 TRBV6-4A0A1B0GX49 114 aa16.26■□□□□ 0.19
PDE4D-223ENST00000515011 J3QQQ9 107 aa16.26■□□□□ 0.19
PDE4D-223ENST00000515011 LEPROTO15243 131 aa16.26■□□□□ 0.19
PDE4D-223ENST00000515011 RNASE13Q5GAN3 156 aaKnown RBP16.26■□□□□ 0.19
PDE4D-223ENST00000515011 AMMECR1LQ6DCA0 310 aa16.26■□□□□ 0.19
PDE4D-223ENST00000515011 SCGB1D4Q6XE38 83 aa16.26■□□□□ 0.19
PDE4D-223ENST00000515011 GAGE12JA6NER3 117 aa16.24■□□□□ 0.19
PDE4D-223ENST00000515011 GAGE4Q13068 117 aa16.24■□□□□ 0.19
PDE4D-223ENST00000515011 GAGE5Q13069 117 aa16.24■□□□□ 0.19
PDE4D-223ENST00000515011 GAGE13Q4V321 117 aa16.24■□□□□ 0.19
PDE4D-223ENST00000515011 RAB37Q96AX2 223 aa16.24■□□□□ 0.19
PDE4D-223ENST00000515011 LGALS3P17931 250 aaKnown RBP16.23■□□□□ 0.19
PDE4D-223ENST00000515011 NHP2Q9NX24 153 aaKnown RBP16.23■□□□□ 0.19
PDE4D-223ENST00000515011 TINCRA0A1B0GVN0 87 aa16.23■□□□□ 0.19
PDE4D-223ENST00000515011 NTM-AS1Q6ZSK4 140 aa16.23■□□□□ 0.19
PDE4D-223ENST00000515011 A0A0J9YY99 117 aa16.21■□□□□ 0.19
PDE4D-223ENST00000515011 H3BUT2 72 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms