RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 HIVEP2P31629 2446 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 TRBV7-3A0A075B6L6 115 aa5.92□□□□□ -1.46
CPNE4-211ENST00000514439 IGLV1-51P01701 117 aa5.92□□□□□ -1.46
CPNE4-211ENST00000514439 NFE4Q86UQ8 179 aa5.92□□□□□ -1.46
CPNE4-211ENST00000514439 PHLDA1Q8WV24 401 aaPredicted RBP5.92□□□□□ -1.46
CPNE4-211ENST00000514439 PLEKHB2Q96CS7 222 aa5.92□□□□□ -1.46
CPNE4-211ENST00000514439 WFDC10AQ9H1F0 79 aa5.92□□□□□ -1.46
CPNE4-211ENST00000514439 GAGE10A6NGK3 116 aa5.92□□□□□ -1.46
CPNE4-211ENST00000514439 LCE2BO14633 110 aa5.92□□□□□ -1.46
CPNE4-211ENST00000514439 RNASE8Q8TDE3 154 aaKnown RBP5.92□□□□□ -1.46
CPNE4-211ENST00000514439 HECTD1Q9ULT8 2610 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 TRGV1A0A0A0MS02 117 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 A0A1W2PPM0 123 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 GIG44P09565 113 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-211ENST00000514439 TSPEAR-AS2P59090 65 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 SCGB1D4Q6XE38 83 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 C19orf73Q9NVV2 129 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 PYGO1Q9Y3Y4 419 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 JMJD1CQ15652 2540 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 K7EP34 96 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 LY6G6DO95868 133 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 CMC4P56277 68 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-211ENST00000514439 CEMP1Q6PRD7 247 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-211ENST00000514439 FAM104AQ969W3 186 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 DNAJC30Q96LL9 226 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 CHCHD7Q9BUK0 85 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 VCX2Q9H322 139 aa5.91□□□□□ -1.46
CPNE4-211ENST00000514439 NIPBLQ6KC79 2804 aaeCLIP5.91□□□□□ -1.46
CPNE4-211ENST00000514439 GCN1Q92616 2671 aaKnown RBP5.9□□□□□ -1.46
CPNE4-211ENST00000514439 IGHV3-38A0A0C4DH36 116 aa5.9□□□□□ -1.46
CPNE4-211ENST00000514439 A0A0J9YXV3 536 aa5.9□□□□□ -1.46
CPNE4-211ENST00000514439 ZNF22P17026 224 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-211ENST00000514439 SAMD5Q5TGI4 173 aa5.9□□□□□ -1.46
CPNE4-211ENST00000514439 GTF2H5Q6ZYL4 71 aa5.9□□□□□ -1.46
CPNE4-211ENST00000514439 TMEM263Q8WUH6 116 aaKnown RBP5.9□□□□□ -1.46
CPNE4-211ENST00000514439 FAM110AQ9BQ89 295 aa5.9□□□□□ -1.46
CPNE4-211ENST00000514439 SETXQ7Z333 2677 aaKnown RBP5.9□□□□□ -1.47
CPNE4-211ENST00000514439 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.9□□□□□ -1.47
CPNE4-211ENST00000514439 TMEM223A0PJW6 202 aa5.9□□□□□ -1.47
CPNE4-211ENST00000514439 IGKV2-29A2NJV5 120 aaPredicted RBP5.9□□□□□ -1.47
CPNE4-211ENST00000514439 RPL35AP18077 110 aaKnown RBP5.9□□□□□ -1.47
CPNE4-211ENST00000514439 KRTAP10-3P60369 221 aa5.9□□□□□ -1.47
CPNE4-211ENST00000514439 C12orf74Q32Q52 190 aa5.9□□□□□ -1.47
CPNE4-211ENST00000514439 Q6ZTI0 123 aa5.9□□□□□ -1.47
CPNE4-211ENST00000514439 ZNF479Q96JC4 524 aa5.9□□□□□ -1.47
CPNE4-211ENST00000514439 AMELXQ99217 191 aa5.9□□□□□ -1.47
CPNE4-211ENST00000514439 NOTCH2Q04721 2471 aa5.89□□□□□ -1.47
CPNE4-211ENST00000514439 J3QQQ9 107 aa5.89□□□□□ -1.47
CPNE4-211ENST00000514439 FABP2P12104 132 aa5.89□□□□□ -1.47
CPNE4-211ENST00000514439 COTL1Q14019 142 aa5.89□□□□□ -1.47
CPNE4-211ENST00000514439 RNASE13Q5GAN3 156 aaKnown RBP5.89□□□□□ -1.47
CPNE4-211ENST00000514439 SPANXA1Q9NS26 97 aa5.89□□□□□ -1.47
CPNE4-211ENST00000514439 UBE2D4Q9Y2X8 147 aa5.89□□□□□ -1.47
CPNE4-211ENST00000514439 SPCS1Q9Y6A9 102 aa5.89□□□□□ -1.47
CPNE4-211ENST00000514439 A0A0J9YY99 117 aa5.88□□□□□ -1.47
CPNE4-211ENST00000514439 GAGE12BA1L429 117 aa5.88□□□□□ -1.47
CPNE4-211ENST00000514439 CRYBA4P53673 196 aa5.88□□□□□ -1.47
CPNE4-211ENST00000514439 NDUFA11Q86Y39 141 aa5.88□□□□□ -1.47
CPNE4-211ENST00000514439 IGHV3-64A0A075B6Q5 118 aa5.88□□□□□ -1.47
CPNE4-211ENST00000514439 A0A1B0GWB2 263 aa5.88□□□□□ -1.47
CPNE4-211ENST00000514439 LGALS3P17931 250 aaKnown RBP5.88□□□□□ -1.47
CPNE4-211ENST00000514439 SRSF9Q13242 221 aaKnown RBP eCLIP5.88□□□□□ -1.47
CPNE4-211ENST00000514439 NOP10Q9NPE3 64 aaKnown RBP5.88□□□□□ -1.47
CPNE4-211ENST00000514439 NOTCH3Q9UM47 2321 aa5.88□□□□□ -1.47
CPNE4-211ENST00000514439 TRAV4A0A0B4J268 109 aa5.87□□□□□ -1.47
CPNE4-211ENST00000514439 PLAC8L1A1L4L8 177 aa5.87□□□□□ -1.47
CPNE4-211ENST00000514439 IGLL5B9A064 214 aa5.87□□□□□ -1.47
CPNE4-211ENST00000514439 K7EQD1 137 aa5.87□□□□□ -1.47
CPNE4-211ENST00000514439 LEPROTO15243 131 aa5.87□□□□□ -1.47
CPNE4-211ENST00000514439 PF4P02776 101 aa5.87□□□□□ -1.47
CPNE4-211ENST00000514439 MRPS36P82909 103 aaKnown RBP5.87□□□□□ -1.47
CPNE4-211ENST00000514439 Q6ZUT4 128 aa5.87□□□□□ -1.47
CPNE4-211ENST00000514439 OR5A1Q8NGJ0 315 aa5.87□□□□□ -1.47
CPNE4-211ENST00000514439 C16orf74Q96GX8 76 aa5.87□□□□□ -1.47
CPNE4-211ENST00000514439 DAZ2Q13117 558 aaKnown RBP5.87□□□□□ -1.47
CPNE4-211ENST00000514439 CSNK1G2-AS1Q8NCQ2 148 aa5.87□□□□□ -1.47
CPNE4-211ENST00000514439 C1QTNF4Q9BXJ3 329 aa5.87□□□□□ -1.47
CPNE4-211ENST00000514439 LINC00482Q8N8I6 264 aa5.86□□□□□ -1.47
CPNE4-211ENST00000514439 SPANXB1Q9NS25 103 aaPredicted RBP5.86□□□□□ -1.47
CPNE4-211ENST00000514439 TRBV10-1A0A0K0K1A3 114 aa5.86□□□□□ -1.47
CPNE4-211ENST00000514439 TMEM238LA0A1B0GVL6 79 aa5.86□□□□□ -1.47
CPNE4-211ENST00000514439 A6NJY4 79 aa5.86□□□□□ -1.47
CPNE4-211ENST00000514439 INAFM1C9JVW0 142 aa5.86□□□□□ -1.47
CPNE4-211ENST00000514439 RPL36AP83881 106 aaKnown RBP5.86□□□□□ -1.47
CPNE4-211ENST00000514439 SLC25A29Q8N8R3 303 aa5.86□□□□□ -1.47
CPNE4-211ENST00000514439 RPL36ALQ969Q0 106 aaKnown RBP5.86□□□□□ -1.47
CPNE4-211ENST00000514439 OTOGQ6ZRI0 2925 aa5.86□□□□□ -1.47
CPNE4-211ENST00000514439 TINCRA0A1B0GVN0 87 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 GAGE7O76087 117 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 GAGE12FP0CL80 117 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 GAGE12GP0CL81 117 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 GAGE12IP0CL82 117 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 UBE2D1P51668 147 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 RRN3P1Q2M238 152 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 TRGV2A0A075B6R0 118 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 TRAV8-3A0A0A6YYJ7 113 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 IGHV3-30P01768 117 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 IGHV3-30-3P0DP02 117 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 IGHV3-30-5P0DP03 117 aa5.85□□□□□ -1.47
CPNE4-211ENST00000514439 TIMM21Q9BVV7 248 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms