RNA–Protein interactions for RNA: ENST00000514131.1

CSNK1G3-208, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 5

Gene CSNK1G3, Length 253 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-208ENST00000514131 ATP11AUNQ6ZP68 121 aa-1.84□□□□□ -2.7
CSNK1G3-208ENST00000514131 OR8I2Q8N0Y5 310 aa-1.84□□□□□ -2.7
CSNK1G3-208ENST00000514131 NRXN2Q9P2S2 1712 aa-1.84□□□□□ -2.7
CSNK1G3-208ENST00000514131 TACC2O95359 2948 aa-1.84□□□□□ -2.7
CSNK1G3-208ENST00000514131 SPINK4O60575 86 aa-1.85□□□□□ -2.71
CSNK1G3-208ENST00000514131 SMIM24O75264 130 aa-1.85□□□□□ -2.71
CSNK1G3-208ENST00000514131 HLA-DRB4P13762 266 aa-1.85□□□□□ -2.71
CSNK1G3-208ENST00000514131 COX6B1P14854 86 aa-1.85□□□□□ -2.71
CSNK1G3-208ENST00000514131 NDUFA12Q9UI09 145 aa-1.85□□□□□ -2.71
CSNK1G3-208ENST00000514131 HLA-DRB4X5D2U9 266 aa-1.85□□□□□ -2.71
CSNK1G3-208ENST00000514131 NBEAL2Q6ZNJ1 2754 aa-1.86□□□□□ -2.71
CSNK1G3-208ENST00000514131 CLPSL1A2RUU4 121 aa-1.86□□□□□ -2.71
CSNK1G3-208ENST00000514131 C10orf82Q8WW14 230 aa-1.86□□□□□ -2.71
CSNK1G3-208ENST00000514131 WDR7Q9Y4E6 1490 aa-1.87□□□□□ -2.71
CSNK1G3-208ENST00000514131 A0A1B0GV72 72 aa-1.87□□□□□ -2.71
CSNK1G3-208ENST00000514131 RPRMQ9NS64 109 aa-1.87□□□□□ -2.71
CSNK1G3-208ENST00000514131 PI4KAP42356 2102 aa-1.87□□□□□ -2.71
CSNK1G3-208ENST00000514131 LRP6O75581 1613 aa-1.88□□□□□ -2.71
CSNK1G3-208ENST00000514131 LAMC1P11047 1609 aa-1.88□□□□□ -2.71
CSNK1G3-208ENST00000514131 TEX15Q9BXT5 2789 aa-1.88□□□□□ -2.71
CSNK1G3-208ENST00000514131 YPEL1O60688 119 aa-1.88□□□□□ -2.71
CSNK1G3-208ENST00000514131 UBE2D1P51668 147 aa-1.88□□□□□ -2.71
CSNK1G3-208ENST00000514131 LINC01545Q5VT33 79 aa-1.88□□□□□ -2.71
CSNK1G3-208ENST00000514131 RPL7L1Q6DKI1 246 aaKnown RBP-1.88□□□□□ -2.71
CSNK1G3-208ENST00000514131 SDF2Q99470 211 aa-1.88□□□□□ -2.71
CSNK1G3-208ENST00000514131 PLECQ15149 4684 aaKnown RBP-1.88□□□□□ -2.71
CSNK1G3-208ENST00000514131 IQSEC2Q5JU85 1478 aa-1.88□□□□□ -2.71
CSNK1G3-208ENST00000514131 IFT172Q9UG01 1749 aa-1.88□□□□□ -2.71
CSNK1G3-208ENST00000514131 SMPXQ9UHP9 88 aa-1.89□□□□□ -2.71
CSNK1G3-208ENST00000514131 XIRP1Q702N8 1843 aaKnown RBP-1.89□□□□□ -2.71
CSNK1G3-208ENST00000514131 ANKRD11Q6UB99 2663 aaPredicted RBP-1.9□□□□□ -2.71
CSNK1G3-208ENST00000514131 A6NIN4 97 aa-1.9□□□□□ -2.71
CSNK1G3-208ENST00000514131 TMEM244Q5VVB8 128 aa-1.9□□□□□ -2.71
CSNK1G3-208ENST00000514131 LSM2Q9Y333 95 aaKnown RBP-1.9□□□□□ -2.71
CSNK1G3-208ENST00000514131 ARFGEF1Q9Y6D6 1849 aa-1.9□□□□□ -2.71
CSNK1G3-208ENST00000514131 LAMA3Q16787 3333 aa-1.9□□□□□ -2.71
CSNK1G3-208ENST00000514131 C9orf116Q5BN46 136 aaPredicted RBP-1.91□□□□□ -2.72
CSNK1G3-208ENST00000514131 DNAJC13O75165 2243 aa-1.91□□□□□ -2.72
CSNK1G3-208ENST00000514131 WNK3Q9BYP7 1800 aa-1.91□□□□□ -2.72
CSNK1G3-208ENST00000514131 H0YJX3 145 aa-1.92□□□□□ -2.72
CSNK1G3-208ENST00000514131 S100GP29377 79 aa-1.92□□□□□ -2.72
CSNK1G3-208ENST00000514131 AGPAT4-IT1Q9H0P7 198 aa-1.92□□□□□ -2.72
CSNK1G3-208ENST00000514131 TSC2P49815 1807 aa-1.92□□□□□ -2.72
CSNK1G3-208ENST00000514131 SIPA1L3O60292 1781 aaPredicted RBP-1.93□□□□□ -2.72
CSNK1G3-208ENST00000514131 PARP14Q460N5 1801 aa-1.93□□□□□ -2.72
CSNK1G3-208ENST00000514131 SPANXN1Q5VSR9 72 aa-1.93□□□□□ -2.72
CSNK1G3-208ENST00000514131 PLXNB2O15031 1838 aa-1.94□□□□□ -2.72
CSNK1G3-208ENST00000514131 ERCC6Q03468 1493 aa-1.94□□□□□ -2.72
CSNK1G3-208ENST00000514131 KDM3BQ7LBC6 1761 aa-1.94□□□□□ -2.72
CSNK1G3-208ENST00000514131 IFNA17P01571 189 aa-1.94□□□□□ -2.72
CSNK1G3-208ENST00000514131 PIRTP0C851 137 aa-1.94□□□□□ -2.72
CSNK1G3-208ENST00000514131 UBE2G1P62253 170 aa-1.94□□□□□ -2.72
CSNK1G3-208ENST00000514131 RPS28P62857 69 aaKnown RBP-1.94□□□□□ -2.72
CSNK1G3-208ENST00000514131 SMIM4Q8WVI0 70 aa-1.94□□□□□ -2.72
CSNK1G3-208ENST00000514131 PBRM1Q86U86 1689 aa-1.94□□□□□ -2.72
CSNK1G3-208ENST00000514131 BICRAQ9NZM4 1560 aa-1.94□□□□□ -2.72
CSNK1G3-208ENST00000514131 VPS13DQ5THJ4 4388 aa-1.94□□□□□ -2.72
CSNK1G3-208ENST00000514131 TFAMQ00059 246 aaKnown RBP-1.95□□□□□ -2.72
CSNK1G3-208ENST00000514131 SPTSSBQ8NFR3 76 aa-1.95□□□□□ -2.72
CSNK1G3-208ENST00000514131 DEFB105AQ8NG35 78 aa-1.95□□□□□ -2.72
CSNK1G3-208ENST00000514131 CTXND1A0A1B0GTU2 59 aa-1.96□□□□□ -2.72
CSNK1G3-208ENST00000514131 TNFP01375 233 aa-1.96□□□□□ -2.72
CSNK1G3-208ENST00000514131 CCL18P55774 89 aa-1.96□□□□□ -2.72
CSNK1G3-208ENST00000514131 VSTM2AQ8TAG5 236 aa-1.96□□□□□ -2.72
CSNK1G3-208ENST00000514131 CENPHQ9H3R5 247 aa-1.96□□□□□ -2.72
CSNK1G3-208ENST00000514131 LINC00312Q9Y6C7 94 aa-1.96□□□□□ -2.72
CSNK1G3-208ENST00000514131 LAMA1P25391 3075 aa-1.96□□□□□ -2.72
CSNK1G3-208ENST00000514131 PAPPAQ13219 1627 aa-1.96□□□□□ -2.72
CSNK1G3-208ENST00000514131 TRAV36DV7A0A075B6V5 113 aa-1.97□□□□□ -2.72
CSNK1G3-208ENST00000514131 M0R135 149 aa-1.97□□□□□ -2.72
CSNK1G3-208ENST00000514131 R4GMQ9 66 aa-1.97□□□□□ -2.72
CSNK1G3-208ENST00000514131 ANK3Q12955 4377 aaKnown RBP-1.97□□□□□ -2.73
CSNK1G3-208ENST00000514131 MGAM2Q2M2H8 2515 aa-1.98□□□□□ -2.73
CSNK1G3-208ENST00000514131 PPP1R17O96001 155 aa-1.98□□□□□ -2.73
CSNK1G3-208ENST00000514131 MIC13Q5XKP0 118 aa-1.98□□□□□ -2.73
CSNK1G3-208ENST00000514131 Q6JHZ5 121 aa-1.98□□□□□ -2.73
CSNK1G3-208ENST00000514131 ZNF818PQ6ZRF7 136 aa-1.98□□□□□ -2.73
CSNK1G3-208ENST00000514131 MAGOHBQ96A72 148 aaKnown RBP-1.98□□□□□ -2.73
CSNK1G3-208ENST00000514131 MTORP42345 2549 aa-1.98□□□□□ -2.73
CSNK1G3-208ENST00000514131 ITPR1Q14643 2758 aa-1.98□□□□□ -2.73
CSNK1G3-208ENST00000514131 MUC22E2RYF6 1773 aaPredicted RBP-1.99□□□□□ -2.73
CSNK1G3-208ENST00000514131 FABP1P07148 127 aa-1.99□□□□□ -2.73
CSNK1G3-208ENST00000514131 CMPK1P30085 196 aa-1.99□□□□□ -2.73
CSNK1G3-208ENST00000514131 DEFB135Q30KP9 77 aa-1.99□□□□□ -2.73
CSNK1G3-208ENST00000514131 SKA2Q8WVK7 121 aaPredicted RBP-1.99□□□□□ -2.73
CSNK1G3-208ENST00000514131 V9GYQ6 96 aa-1.99□□□□□ -2.73
CSNK1G3-208ENST00000514131 CCDC168Q8NDH2 2452 aa-1.99□□□□□ -2.73
CSNK1G3-208ENST00000514131 GOLGA4Q13439 2230 aaKnown RBP-2□□□□□ -2.73
CSNK1G3-208ENST00000514131 TRBV20-1A0A075B6N2 111 aa-2□□□□□ -2.73
CSNK1G3-208ENST00000514131 TNFSF15O95150 251 aa-2□□□□□ -2.73
CSNK1G3-208ENST00000514131 TMEM170BQ5T4T1 132 aa-2□□□□□ -2.73
CSNK1G3-208ENST00000514131 TCTE3Q8IZS6 198 aa-2□□□□□ -2.73
CSNK1G3-208ENST00000514131 HTTP42858 3142 aa-2.02□□□□□ -2.73
CSNK1G3-208ENST00000514131 RIF1Q5UIP0 2472 aaKnown RBP-2.02□□□□□ -2.73
CSNK1G3-208ENST00000514131 M0R129 80 aa-2.02□□□□□ -2.73
CSNK1G3-208ENST00000514131 SCTP09683 121 aa-2.02□□□□□ -2.73
CSNK1G3-208ENST00000514131 CTAGE3PQ8IX95 158 aa-2.02□□□□□ -2.73
CSNK1G3-208ENST00000514131 DEFB123Q8N688 67 aa-2.02□□□□□ -2.73
CSNK1G3-208ENST00000514131 HIGD1AQ9Y241 93 aa-2.02□□□□□ -2.73
CSNK1G3-208ENST00000514131 A0A1B0GX51 115 aa-2.03□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms