RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 S100A1P23297 94 aa5.73□□□□□ -1.49
HERC4-214ENST00000513996 CEBPGP53567 150 aa5.73□□□□□ -1.49
HERC4-214ENST00000513996 RBX1P62877 108 aa5.73□□□□□ -1.49
HERC4-214ENST00000513996 PEA15Q15121 130 aa5.73□□□□□ -1.49
HERC4-214ENST00000513996 TWIST1Q15672 202 aa5.73□□□□□ -1.49
HERC4-214ENST00000513996 IQCJQ1A5X6 159 aa5.73□□□□□ -1.49
HERC4-214ENST00000513996 RASL11AQ6T310 242 aa5.73□□□□□ -1.49
HERC4-214ENST00000513996 FAM231DQ6ZW35 169 aa5.73□□□□□ -1.49
HERC4-214ENST00000513996 SLC7A5P1Q8MH63 180 aa5.73□□□□□ -1.49
HERC4-214ENST00000513996 EIF5A2Q9GZV4 153 aaKnown RBP5.73□□□□□ -1.49
HERC4-214ENST00000513996 DPH3P1Q9H4G8 78 aa5.73□□□□□ -1.49
HERC4-214ENST00000513996 NIT2Q9NQR4 276 aa5.73□□□□□ -1.49
HERC4-214ENST00000513996 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.72□□□□□ -1.49
HERC4-214ENST00000513996 TRAV26-2A0A0B4J265 109 aa5.72□□□□□ -1.49
HERC4-214ENST00000513996 C9JQL5 133 aa5.72□□□□□ -1.49
HERC4-214ENST00000513996 SMR3BP02814 79 aaPredicted RBP5.72□□□□□ -1.49
HERC4-214ENST00000513996 ANGP03950 147 aaKnown RBP5.72□□□□□ -1.49
HERC4-214ENST00000513996 Q0VG73 95 aa5.72□□□□□ -1.49
HERC4-214ENST00000513996 ELOBQ15370 118 aa5.72□□□□□ -1.49
HERC4-214ENST00000513996 LINC01620Q4KN68 170 aa5.72□□□□□ -1.49
HERC4-214ENST00000513996 CFAP161Q6P656 301 aa5.72□□□□□ -1.49
HERC4-214ENST00000513996 KRTAP26-1Q6PEX3 210 aa5.72□□□□□ -1.49
HERC4-214ENST00000513996 GATD1Q8NB37 220 aa5.72□□□□□ -1.49
HERC4-214ENST00000513996 RMI2Q96E14 147 aa5.72□□□□□ -1.49
HERC4-214ENST00000513996 PGLYRP4Q96LB8 373 aa5.72□□□□□ -1.49
HERC4-214ENST00000513996 COX11Q9Y6N1 276 aa5.72□□□□□ -1.49
HERC4-214ENST00000513996 IGLV4-60A0A075B6I1 120 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 TRBV25-1A0A075B6N4 114 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 IGHV1-24A0A0C4DH33 117 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 H7C1H1 209 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 TMEM97Q5BJF2 176 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 KCNIP4Q6PIL6 250 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 LINC01551Q86U37 167 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 LINC00269Q8N2A0 174 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 SMIM7Q9BQ49 75 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 TMEM70Q9BUB7 260 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 GFRA4Q9GZZ7 299 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 PRR34Q9NV39 138 aa5.71□□□□□ -1.5
HERC4-214ENST00000513996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.71□□□□□ -1.5
HERC4-214ENST00000513996 TMEM218A2RU14 115 aa5.7□□□□□ -1.5
HERC4-214ENST00000513996 ZNF727A8MUV8 499 aa5.7□□□□□ -1.5
HERC4-214ENST00000513996 A8MWL6 223 aa5.7□□□□□ -1.5
HERC4-214ENST00000513996 EPM2AB3EWF7 344 aa5.7□□□□□ -1.5
HERC4-214ENST00000513996 ATP6V1G1O75348 118 aa5.7□□□□□ -1.5
HERC4-214ENST00000513996 GAS8-AS1O95177 125 aa5.7□□□□□ -1.5
HERC4-214ENST00000513996 SRSF3P84103 164 aaKnown RBP5.7□□□□□ -1.5
HERC4-214ENST00000513996 C10orf91Q5T1B1 145 aa5.7□□□□□ -1.5
HERC4-214ENST00000513996 CLPSL2Q6UWE3 100 aa5.7□□□□□ -1.5
HERC4-214ENST00000513996 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.7□□□□□ -1.5
HERC4-214ENST00000513996 C20orf203Q8NBC4 194 aa5.7□□□□□ -1.5
HERC4-214ENST00000513996 RPL39LQ96EH5 51 aaKnown RBP5.7□□□□□ -1.5
HERC4-214ENST00000513996 C1orf43Q9BWL3 253 aa5.7□□□□□ -1.5
HERC4-214ENST00000513996 OSTCQ9NRP0 149 aa5.7□□□□□ -1.5
HERC4-214ENST00000513996 PRSS47A8MTI9 375 aa5.69□□□□□ -1.5
HERC4-214ENST00000513996 FAM74A3Q4VXF1 159 aa5.69□□□□□ -1.5
HERC4-214ENST00000513996 Q5VSD8 79 aa5.69□□□□□ -1.5
HERC4-214ENST00000513996 Q6ZSA8 131 aa5.69□□□□□ -1.5
HERC4-214ENST00000513996 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
HERC4-214ENST00000513996 TMEM243Q9BU79 118 aa5.69□□□□□ -1.5
HERC4-214ENST00000513996 SEC11CQ9BY50 192 aa5.69□□□□□ -1.5
HERC4-214ENST00000513996 V9GYV3 84 aa5.69□□□□□ -1.5
HERC4-214ENST00000513996 A0A1B0GUV1 79 aa5.68□□□□□ -1.5
HERC4-214ENST00000513996 HIGD1CA8MV81 97 aa5.68□□□□□ -1.5
HERC4-214ENST00000513996 CRPP02741 224 aa5.68□□□□□ -1.5
HERC4-214ENST00000513996 PKIAP61925 76 aa5.68□□□□□ -1.5
HERC4-214ENST00000513996 MIAQ16674 131 aa5.68□□□□□ -1.5
HERC4-214ENST00000513996 TMEM241Q24JQ0 296 aa5.68□□□□□ -1.5
HERC4-214ENST00000513996 LCE3BQ5TA77 95 aa5.68□□□□□ -1.5
HERC4-214ENST00000513996 TSKUQ8WUA8 353 aa5.68□□□□□ -1.5
HERC4-214ENST00000513996 FRZBQ92765 325 aa5.68□□□□□ -1.5
HERC4-214ENST00000513996 ISOC2Q96AB3 205 aa5.68□□□□□ -1.5
HERC4-214ENST00000513996 RNF185Q96GF1 192 aa5.68□□□□□ -1.5
HERC4-214ENST00000513996 CARHSP1Q9Y2V2 147 aaKnown RBP5.68□□□□□ -1.5
HERC4-214ENST00000513996 VPS13BQ7Z7G8 4022 aa5.67□□□□□ -1.5
HERC4-214ENST00000513996 IGLV10-54A0A075B6I4 117 aa5.67□□□□□ -1.5
HERC4-214ENST00000513996 FAM231BA6NCW3 169 aa5.67□□□□□ -1.5
HERC4-214ENST00000513996 USP17L23D6RBM5 183 aa5.67□□□□□ -1.5
HERC4-214ENST00000513996 HLA-DQA1P01909 254 aa5.67□□□□□ -1.5
HERC4-214ENST00000513996 PRSS1P07477 247 aa5.67□□□□□ -1.5
HERC4-214ENST00000513996 RPL23P62829 140 aaKnown RBP5.67□□□□□ -1.5
HERC4-214ENST00000513996 REG3AQ06141 175 aa5.67□□□□□ -1.5
HERC4-214ENST00000513996 COTL1Q14019 142 aa5.67□□□□□ -1.5
HERC4-214ENST00000513996 NUP35Q8NFH5 326 aa5.67□□□□□ -1.5
HERC4-214ENST00000513996 A0A1B0GUT8 65 aa5.66□□□□□ -1.5
HERC4-214ENST00000513996 SDHAF1A6NFY7 115 aa5.66□□□□□ -1.5
HERC4-214ENST00000513996 RAB4AP20338 218 aa5.66□□□□□ -1.5
HERC4-214ENST00000513996 RPS10P46783 165 aaKnown RBP5.66□□□□□ -1.5
HERC4-214ENST00000513996 AMTP48728 403 aa5.66□□□□□ -1.5
HERC4-214ENST00000513996 SMIM15Q7Z3B0 74 aa5.66□□□□□ -1.5
HERC4-214ENST00000513996 TMEM191AQ9H0A3 160 aa5.66□□□□□ -1.5
HERC4-214ENST00000513996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.65□□□□□ -1.5
HERC4-214ENST00000513996 TRBV6-5A0A0K0K1A5 114 aa5.65□□□□□ -1.5
HERC4-214ENST00000513996 IGKV2-29A2NJV5 120 aaPredicted RBP5.65□□□□□ -1.5
HERC4-214ENST00000513996 F8W036 122 aa5.65□□□□□ -1.5
HERC4-214ENST00000513996 INAFM2P0DMQ5 153 aa5.65□□□□□ -1.5
HERC4-214ENST00000513996 PNRC1Q12796 327 aaPredicted RBP5.65□□□□□ -1.5
HERC4-214ENST00000513996 AMN1Q8IY45 258 aa5.65□□□□□ -1.5
HERC4-214ENST00000513996 TRAV8-4A0A0B4J246 113 aa5.64□□□□□ -1.51
HERC4-214ENST00000513996 SMKR1H3BMG3 65 aa5.64□□□□□ -1.51
HERC4-214ENST00000513996 NCR2O95944 276 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 430.5 ms