RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GAGE12FP0CL80 117 aa10.66□□□□□ -0.7
VCAN-211ENST00000513984 GAGE12GP0CL81 117 aa10.66□□□□□ -0.7
VCAN-211ENST00000513984 GAGE12IP0CL82 117 aa10.66□□□□□ -0.7
VCAN-211ENST00000513984 HINT1P49773 126 aaPredicted RBP10.66□□□□□ -0.7
VCAN-211ENST00000513984 CHCHD7Q9BUK0 85 aa10.66□□□□□ -0.7
VCAN-211ENST00000513984 TRBV7-3A0A075B6L6 115 aa10.65□□□□□ -0.7
VCAN-211ENST00000513984 TRGV2A0A075B6R0 118 aa10.65□□□□□ -0.7
VCAN-211ENST00000513984 A0A1B0GV90 55 aa10.65□□□□□ -0.7
VCAN-211ENST00000513984 SMIM9A6NGZ8 99 aa10.65□□□□□ -0.7
VCAN-211ENST00000513984 SIVA1O15304 175 aa10.65□□□□□ -0.7
VCAN-211ENST00000513984 PAPPA-AS1Q5QFB9 102 aa10.65□□□□□ -0.7
VCAN-211ENST00000513984 X6R8D5 127 aa10.65□□□□□ -0.7
VCAN-211ENST00000513984 CYSRT1A8MQ03 144 aa10.65□□□□□ -0.71
VCAN-211ENST00000513984 NPSP0C0P6 89 aa10.65□□□□□ -0.71
VCAN-211ENST00000513984 COTL1Q14019 142 aa10.65□□□□□ -0.71
VCAN-211ENST00000513984 SLC25A29Q8N8R3 303 aa10.65□□□□□ -0.71
VCAN-211ENST00000513984 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.71
VCAN-211ENST00000513984 IGLV4-3A0A075B6K6 122 aa10.64□□□□□ -0.71
VCAN-211ENST00000513984 APOC4P55056 127 aa10.64□□□□□ -0.71
VCAN-211ENST00000513984 RPL36AP83881 106 aaKnown RBP10.64□□□□□ -0.71
VCAN-211ENST00000513984 MPV17L2Q567V2 206 aa10.64□□□□□ -0.71
VCAN-211ENST00000513984 COL5A1-AS1Q5SY13 56 aa10.64□□□□□ -0.71
VCAN-211ENST00000513984 PHLDA1Q8WV24 401 aaPredicted RBP10.64□□□□□ -0.71
VCAN-211ENST00000513984 RPL36ALQ969Q0 106 aaKnown RBP10.64□□□□□ -0.71
VCAN-211ENST00000513984 TRRAPQ9Y4A5 3859 aa10.63□□□□□ -0.71
VCAN-211ENST00000513984 IGHV3-38A0A0C4DH36 116 aa10.63□□□□□ -0.71
VCAN-211ENST00000513984 C11orf86A6NJI1 115 aa10.63□□□□□ -0.71
VCAN-211ENST00000513984 C12orf54Q6X4T0 127 aa10.63□□□□□ -0.71
VCAN-211ENST00000513984 LINC00612Q8N6U2 182 aa10.63□□□□□ -0.71
VCAN-211ENST00000513984 OPRPNQ99935 248 aaPredicted RBP10.63□□□□□ -0.71
VCAN-211ENST00000513984 CRYBA4P53673 196 aa10.63□□□□□ -0.71
VCAN-211ENST00000513984 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
VCAN-211ENST00000513984 SPANXA1Q9NS26 97 aa10.63□□□□□ -0.71
VCAN-211ENST00000513984 TRBV6-4A0A1B0GX49 114 aa10.62□□□□□ -0.71
VCAN-211ENST00000513984 UBE2D3P61077 147 aa10.62□□□□□ -0.71
VCAN-211ENST00000513984 UBE2D2P62837 147 aa10.62□□□□□ -0.71
VCAN-211ENST00000513984 DAZ4Q86SG3 579 aaKnown RBP10.62□□□□□ -0.71
VCAN-211ENST00000513984 DAZ3Q9NR90 486 aaKnown RBP10.62□□□□□ -0.71
VCAN-211ENST00000513984 E9PLD3 99 aa10.61□□□□□ -0.71
VCAN-211ENST00000513984 TMEM97Q5BJF2 176 aa10.61□□□□□ -0.71
VCAN-211ENST00000513984 BVES-AS1Q5T3Y7 98 aa10.61□□□□□ -0.71
VCAN-211ENST00000513984 NFE4Q86UQ8 179 aa10.61□□□□□ -0.71
VCAN-211ENST00000513984 AMELXQ99217 191 aa10.61□□□□□ -0.71
VCAN-211ENST00000513984 TTTY13Q9BZ97 58 aa10.61□□□□□ -0.71
VCAN-211ENST00000513984 UBE2D4Q9Y2X8 147 aa10.61□□□□□ -0.71
VCAN-211ENST00000513984 EMP1P54849 157 aa10.61□□□□□ -0.71
VCAN-211ENST00000513984 VCX2Q9H322 139 aa10.61□□□□□ -0.71
VCAN-211ENST00000513984 HIGD1BQ9P298 99 aa10.61□□□□□ -0.71
VCAN-211ENST00000513984 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.6□□□□□ -0.71
VCAN-211ENST00000513984 TRGV4A0A0C4DH28 118 aa10.6□□□□□ -0.71
VCAN-211ENST00000513984 IGKV2-29A2NJV5 120 aaPredicted RBP10.6□□□□□ -0.71
VCAN-211ENST00000513984 FHL2Q14192 279 aa10.6□□□□□ -0.71
VCAN-211ENST00000513984 SHISA2Q6UWI4 295 aa10.6□□□□□ -0.71
VCAN-211ENST00000513984 DEFB135Q30KP9 77 aa10.59□□□□□ -0.71
VCAN-211ENST00000513984 PRIMA1Q86XR5 153 aa10.59□□□□□ -0.71
VCAN-211ENST00000513984 LURAP1LQ8IV03 231 aa10.59□□□□□ -0.71
VCAN-211ENST00000513984 C3orf56Q8N813 242 aa10.59□□□□□ -0.71
VCAN-211ENST00000513984 OR11H2Q8NH07 326 aa10.59□□□□□ -0.71
VCAN-211ENST00000513984 ZMAT5Q9UDW3 170 aaKnown RBP10.59□□□□□ -0.71
VCAN-211ENST00000513984 TRAV8-6A0A0B4J262 113 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 GAGE12JA6NER3 117 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 HSD52Q0P140 79 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 GAGE1Q13065 139 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 GAGE4Q13068 117 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 GAGE5Q13069 117 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 GAGE13Q4V321 117 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 CEMP1Q6PRD7 247 aaPredicted RBP10.58□□□□□ -0.72
VCAN-211ENST00000513984 CHAC1Q9BUX1 264 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 TIMM21Q9BVV7 248 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 TRBV25-1A0A075B6N4 114 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 IGHV4-30-4P0DP06 118 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 HERVK_113P61574 105 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 MAPKAPK5-AS1Q8N8E1 139 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 PRADC1Q9BSG0 188 aa10.58□□□□□ -0.72
VCAN-211ENST00000513984 NTM-AS1Q6ZSK4 140 aa10.57□□□□□ -0.72
VCAN-211ENST00000513984 GTSF1LQ9H1H1 148 aa10.57□□□□□ -0.72
VCAN-211ENST00000513984 LYRM9A8MSI8 78 aa10.56□□□□□ -0.72
VCAN-211ENST00000513984 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
VCAN-211ENST00000513984 DEFB130BP0DP73 79 aa10.56□□□□□ -0.72
VCAN-211ENST00000513984 DEFB130AP0DP74 79 aa10.56□□□□□ -0.72
VCAN-211ENST00000513984 MRPS36P82909 103 aaKnown RBP10.56□□□□□ -0.72
VCAN-211ENST00000513984 FBN1P35555 2871 aaKnown RBP10.56□□□□□ -0.72
VCAN-211ENST00000513984 LOC100131303A0A0U1RQF7 123 aa10.56□□□□□ -0.72
VCAN-211ENST00000513984 OXLD1Q5BKU9 147 aa10.56□□□□□ -0.72
VCAN-211ENST00000513984 TMEM170BQ5T4T1 132 aa10.56□□□□□ -0.72
VCAN-211ENST00000513984 SBSPONQ8IVN8 264 aa10.56□□□□□ -0.72
VCAN-211ENST00000513984 A0A0J9YXV3 536 aa10.55□□□□□ -0.72
VCAN-211ENST00000513984 MYMXA0A1B0GTQ4 84 aa10.55□□□□□ -0.72
VCAN-211ENST00000513984 Q6ZUT4 128 aa10.55□□□□□ -0.72
VCAN-211ENST00000513984 MIFP14174 115 aa10.54□□□□□ -0.72
VCAN-211ENST00000513984 ZNF22P17026 224 aaPredicted RBP10.54□□□□□ -0.72
VCAN-211ENST00000513984 SEC11AP67812 179 aa10.54□□□□□ -0.72
VCAN-211ENST00000513984 EGFEM1PQ0D2K5 195 aa10.54□□□□□ -0.72
VCAN-211ENST00000513984 FAM222AQ5U5X8 452 aa10.54□□□□□ -0.72
VCAN-211ENST00000513984 CSDC2Q9Y534 153 aaKnown RBP10.54□□□□□ -0.72
VCAN-211ENST00000513984 IGHV4-28A0A0C4DH34 117 aa10.54□□□□□ -0.72
VCAN-211ENST00000513984 Q8NAQ8 132 aa10.54□□□□□ -0.72
VCAN-211ENST00000513984 RNF183Q96D59 192 aa10.54□□□□□ -0.72
VCAN-211ENST00000513984 STAB1Q9NY15 2570 aa10.53□□□□□ -0.72
VCAN-211ENST00000513984 TMEM223A0PJW6 202 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms