RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SIVA1O15304 175 aa6.68□□□□□ -1.34
TOPBP1-209ENST00000513818 IGHV3-30P01768 117 aa6.68□□□□□ -1.34
TOPBP1-209ENST00000513818 IGHV3-33P01772 117 aa6.68□□□□□ -1.34
TOPBP1-209ENST00000513818 IGHV3-30-3P0DP02 117 aa6.68□□□□□ -1.34
TOPBP1-209ENST00000513818 IGHV3-30-5P0DP03 117 aa6.68□□□□□ -1.34
TOPBP1-209ENST00000513818 S100PP25815 95 aa6.68□□□□□ -1.34
TOPBP1-209ENST00000513818 LELP1Q5T871 98 aa6.68□□□□□ -1.34
TOPBP1-209ENST00000513818 NTM-AS1Q6ZSK4 140 aa6.68□□□□□ -1.34
TOPBP1-209ENST00000513818 MRAP2Q96G30 205 aa6.68□□□□□ -1.34
TOPBP1-209ENST00000513818 DNAJC30Q96LL9 226 aa6.68□□□□□ -1.34
TOPBP1-209ENST00000513818 IMMP2LQ96T52 175 aa6.68□□□□□ -1.34
TOPBP1-209ENST00000513818 TGIF2-C20orf24A0A0A6YYL0 155 aa6.67□□□□□ -1.34
TOPBP1-209ENST00000513818 NBDYA0A0U1RRE5 68 aa6.67□□□□□ -1.34
TOPBP1-209ENST00000513818 USP17L23D6RBM5 183 aa6.67□□□□□ -1.34
TOPBP1-209ENST00000513818 S100A8P05109 93 aa6.67□□□□□ -1.34
TOPBP1-209ENST00000513818 NRACQ8N912 160 aa6.67□□□□□ -1.34
TOPBP1-209ENST00000513818 TRBV6-8A0A0A6YYG3 113 aa6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 TRAV8-6A0A0B4J262 113 aa6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 SDHAF1A6NFY7 115 aa6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 NPYP01303 97 aa6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 CKS2P33552 79 aa6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 Q6ZR54 194 aa6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 TMEM136Q6ZRR5 245 aa6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 DAZ4Q86SG3 579 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 CBLN2Q8IUK8 224 aa6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 DAZ3Q9NR90 486 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 TMEM242Q9NWH2 141 aa6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 EPPK1P58107 5090 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-209ENST00000513818 PKD1P98161 4303 aa6.65□□□□□ -1.34
TOPBP1-209ENST00000513818 DNAH10OSP0CZ25 163 aa6.65□□□□□ -1.34
TOPBP1-209ENST00000513818 GAGE6Q13070 117 aa6.65□□□□□ -1.34
TOPBP1-209ENST00000513818 ELOBQ15370 118 aa6.65□□□□□ -1.34
TOPBP1-209ENST00000513818 KIAA1644Q3SXP7 199 aa6.65□□□□□ -1.34
TOPBP1-209ENST00000513818 TMEM70Q9BUB7 260 aa6.65□□□□□ -1.34
TOPBP1-209ENST00000513818 ST20Q9HBF5 79 aa6.65□□□□□ -1.34
TOPBP1-209ENST00000513818 TRAV9-1A0A075B6T8 112 aa6.64□□□□□ -1.35
TOPBP1-209ENST00000513818 TRBV6-5A0A0K0K1A5 114 aa6.64□□□□□ -1.35
TOPBP1-209ENST00000513818 AMTP48728 403 aa6.64□□□□□ -1.35
TOPBP1-209ENST00000513818 COTL1Q14019 142 aa6.64□□□□□ -1.35
TOPBP1-209ENST00000513818 XP32Q5T750 250 aa6.64□□□□□ -1.35
TOPBP1-209ENST00000513818 SERTAD4-AS1Q5TG53 156 aa6.64□□□□□ -1.35
TOPBP1-209ENST00000513818 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-209ENST00000513818 CHCHD5Q9BSY4 110 aa6.64□□□□□ -1.35
TOPBP1-209ENST00000513818 TRBV25-1A0A075B6N4 114 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 IGHV1-24A0A0C4DH33 117 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 IGKV2-29A2NJV5 120 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 TMEM262E9PQX1 116 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 SCO1O75880 301 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 TSHBP01222 138 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 PMCHP20382 165 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 SUMO2P61956 95 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 MPV17L2Q567V2 206 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 LINC01556Q5JQF7 62 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 NIT1Q86X76 327 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 ORMDL3Q8N138 153 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 Q8N976 141 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 FRZBQ92765 325 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 PRELID3AQ96N28 172 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 DNAH5Q8TE73 4624 aa6.63□□□□□ -1.35
TOPBP1-209ENST00000513818 LOC389332A0A1B0GUA5 103 aa6.62□□□□□ -1.35
TOPBP1-209ENST00000513818 I3L3M4 83 aa6.62□□□□□ -1.35
TOPBP1-209ENST00000513818 APCSP02743 223 aa6.62□□□□□ -1.35
TOPBP1-209ENST00000513818 POLR2KP53803 58 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-209ENST00000513818 IQCJQ1A5X6 159 aa6.62□□□□□ -1.35
TOPBP1-209ENST00000513818 CLPSL2Q6UWE3 100 aa6.62□□□□□ -1.35
TOPBP1-209ENST00000513818 YPEL4Q96NS1 127 aa6.62□□□□□ -1.35
TOPBP1-209ENST00000513818 TMEM243Q9BU79 118 aa6.62□□□□□ -1.35
TOPBP1-209ENST00000513818 Q9HAA7 133 aa6.62□□□□□ -1.35
TOPBP1-209ENST00000513818 A0A087WX48 190 aa6.61□□□□□ -1.35
TOPBP1-209ENST00000513818 RTL8CO15255 209 aa6.61□□□□□ -1.35
TOPBP1-209ENST00000513818 HLA-DQA1P01909 254 aa6.61□□□□□ -1.35
TOPBP1-209ENST00000513818 TMEM97Q5BJF2 176 aa6.61□□□□□ -1.35
TOPBP1-209ENST00000513818 C6orf223Q8N319 242 aa6.61□□□□□ -1.35
TOPBP1-209ENST00000513818 CHCHD7Q9BUK0 85 aa6.61□□□□□ -1.35
TOPBP1-209ENST00000513818 SMIM2Q9BVW6 85 aa6.61□□□□□ -1.35
TOPBP1-209ENST00000513818 HECTD4Q9Y4D8 3996 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 TRBV24-1A0A075B6N3 115 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 TRBV27A0A0K0K1C4 114 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 UBE2L6O14933 153 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 TCAPO15273 167 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 PPBPP02775 128 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 FCER1GP30273 86 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 RBX1P62877 108 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 FABP9Q0Z7S8 132 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 C1orf134Q5TEV5 83 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 GNB1LQ9BYB4 327 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 SMCO4Q9NRQ5 59 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 KLK12Q9UKR0 248 aa6.6□□□□□ -1.35
TOPBP1-209ENST00000513818 IGLV4-60A0A075B6I1 120 aa6.59□□□□□ -1.35
TOPBP1-209ENST00000513818 VCYO14598 125 aa6.59□□□□□ -1.35
TOPBP1-209ENST00000513818 ATP6V1G1O75348 118 aa6.59□□□□□ -1.35
TOPBP1-209ENST00000513818 PPP1R17O96001 155 aa6.59□□□□□ -1.35
TOPBP1-209ENST00000513818 ANGP03950 147 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-209ENST00000513818 C20orf78Q9BR46 151 aa6.59□□□□□ -1.35
TOPBP1-209ENST00000513818 MAP1LC3AQ9H492 121 aa6.59□□□□□ -1.35
TOPBP1-209ENST00000513818 TRAV9-2A0A087WT02 112 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 IBA57-AS1B1ANH7 110 aa6.58□□□□□ -1.36
TOPBP1-209ENST00000513818 PHOX2AO14813 284 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 541.2 ms