RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 NUDT11Q96G61 164 aa4.78□□□□□ -1.64
HTT-212ENST00000513639 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
HTT-212ENST00000513639 DPH3P1Q9H4G8 78 aa4.78□□□□□ -1.64
HTT-212ENST00000513639 PRR34Q9NV39 138 aa4.78□□□□□ -1.64
HTT-212ENST00000513639 TMEM250H0YL14 139 aa4.77□□□□□ -1.65
HTT-212ENST00000513639 UBE2L6O14933 153 aa4.77□□□□□ -1.65
HTT-212ENST00000513639 NKX2-5P52952 324 aaPredicted RBP4.77□□□□□ -1.65
HTT-212ENST00000513639 HAMPP81172 84 aa4.77□□□□□ -1.65
HTT-212ENST00000513639 SUMO4Q6EEV6 95 aa4.77□□□□□ -1.65
HTT-212ENST00000513639 Q6ZNX1 250 aa4.77□□□□□ -1.65
HTT-212ENST00000513639 OCC1Q8TAD7 63 aa4.77□□□□□ -1.65
HTT-212ENST00000513639 DEFB104AQ8WTQ1 72 aa4.77□□□□□ -1.65
HTT-212ENST00000513639 PGLYRP4Q96LB8 373 aa4.77□□□□□ -1.65
HTT-212ENST00000513639 TMEM243Q9BU79 118 aa4.77□□□□□ -1.65
HTT-212ENST00000513639 TRBV20OR9-2A0A075B6H5 130 aa4.76□□□□□ -1.65
HTT-212ENST00000513639 A8MWL6 223 aa4.76□□□□□ -1.65
HTT-212ENST00000513639 USP17L23D6RBM5 183 aa4.76□□□□□ -1.65
HTT-212ENST00000513639 REG3AQ06141 175 aa4.76□□□□□ -1.65
HTT-212ENST00000513639 COTL1Q14019 142 aa4.76□□□□□ -1.65
HTT-212ENST00000513639 AKAP14Q86UN6 197 aa4.76□□□□□ -1.65
HTT-212ENST00000513639 FAM210AQ96ND0 272 aa4.76□□□□□ -1.65
HTT-212ENST00000513639 CNFNQ9BYD5 112 aa4.76□□□□□ -1.65
HTT-212ENST00000513639 RPP21Q9H633 154 aaKnown RBP4.76□□□□□ -1.65
HTT-212ENST00000513639 GATCO43716 136 aaKnown RBP4.75□□□□□ -1.65
HTT-212ENST00000513639 HLA-DQA1P01909 254 aa4.75□□□□□ -1.65
HTT-212ENST00000513639 PRSS1P07477 247 aa4.75□□□□□ -1.65
HTT-212ENST00000513639 CTRLP40313 264 aa4.75□□□□□ -1.65
HTT-212ENST00000513639 FOXA3P55318 350 aaPredicted RBP4.75□□□□□ -1.65
HTT-212ENST00000513639 LINC01620Q4KN68 170 aa4.75□□□□□ -1.65
HTT-212ENST00000513639 CFAP161Q6P656 301 aa4.75□□□□□ -1.65
HTT-212ENST00000513639 SCXQ7RTU7 201 aa4.75□□□□□ -1.65
HTT-212ENST00000513639 C9orf163Q8N9P6 203 aa4.75□□□□□ -1.65
HTT-212ENST00000513639 CIRBP-AS1Q8TBR5 109 aa4.75□□□□□ -1.65
HTT-212ENST00000513639 BORCS7Q96B45 105 aa4.75□□□□□ -1.65
HTT-212ENST00000513639 RNASE7Q9H1E1 156 aaKnown RBP4.75□□□□□ -1.65
HTT-212ENST00000513639 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.74□□□□□ -1.65
HTT-212ENST00000513639 H7C423 109 aa4.74□□□□□ -1.65
HTT-212ENST00000513639 K7EN84 100 aa4.74□□□□□ -1.65
HTT-212ENST00000513639 NDUFS6O75380 124 aaKnown RBP4.74□□□□□ -1.65
HTT-212ENST00000513639 NCR2O95944 276 aa4.74□□□□□ -1.65
HTT-212ENST00000513639 AMTP48728 403 aa4.74□□□□□ -1.65
HTT-212ENST00000513639 FAM231DQ6ZW35 169 aa4.74□□□□□ -1.65
HTT-212ENST00000513639 GATD1Q8NB37 220 aa4.74□□□□□ -1.65
HTT-212ENST00000513639 LYPD6BQ8NI32 183 aa4.74□□□□□ -1.65
HTT-212ENST00000513639 DPH3Q96FX2 82 aa4.74□□□□□ -1.65
HTT-212ENST00000513639 EIF5A2Q9GZV4 153 aaKnown RBP4.74□□□□□ -1.65
HTT-212ENST00000513639 hDV102S1A0JD36 115 aa4.73□□□□□ -1.65
HTT-212ENST00000513639 FAM231BA6NCW3 169 aa4.73□□□□□ -1.65
HTT-212ENST00000513639 CNBPP62633 177 aaKnown RBP4.73□□□□□ -1.65
HTT-212ENST00000513639 CT83Q5H943 113 aa4.73□□□□□ -1.65
HTT-212ENST00000513639 AMMECR1LQ6DCA0 310 aa4.73□□□□□ -1.65
HTT-212ENST00000513639 KRTAP26-1Q6PEX3 210 aa4.73□□□□□ -1.65
HTT-212ENST00000513639 CLPSL2Q6UWE3 100 aa4.73□□□□□ -1.65
HTT-212ENST00000513639 ALKAL2Q6UX46 152 aa4.73□□□□□ -1.65
HTT-212ENST00000513639 C20orf203Q8NBC4 194 aa4.73□□□□□ -1.65
HTT-212ENST00000513639 IGLV4-60A0A075B6I1 120 aa4.72□□□□□ -1.65
HTT-212ENST00000513639 IGLV10-54A0A075B6I4 117 aa4.72□□□□□ -1.65
HTT-212ENST00000513639 KRTAP29-1A8MX34 341 aaPredicted RBP4.72□□□□□ -1.65
HTT-212ENST00000513639 I3L3M4 83 aa4.72□□□□□ -1.65
HTT-212ENST00000513639 PPP1R17O96001 155 aa4.72□□□□□ -1.65
HTT-212ENST00000513639 PMCHP20382 165 aa4.72□□□□□ -1.65
HTT-212ENST00000513639 CEBPGP53567 150 aa4.72□□□□□ -1.65
HTT-212ENST00000513639 SDIM1Q6ZPB5 146 aa4.72□□□□□ -1.65
HTT-212ENST00000513639 GTSF1Q8WW33 167 aa4.72□□□□□ -1.65
HTT-212ENST00000513639 TMEM101Q96IK0 257 aa4.72□□□□□ -1.65
HTT-212ENST00000513639 SMIM7Q9BQ49 75 aa4.72□□□□□ -1.65
HTT-212ENST00000513639 GFRA4Q9GZZ7 299 aa4.72□□□□□ -1.65
HTT-212ENST00000513639 IGHV3-64A0A075B6Q5 118 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 TRAV26-2A0A0B4J265 109 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 TRBV6-5A0A0K0K1A5 114 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 A0A1B0GUT8 65 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 SDHAF1A6NFY7 115 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 ZNF727A8MUV8 499 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 OXTP01178 125 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 APCSP02743 223 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 FAM74A3Q4VXF1 159 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 RNASEKQ6P5S7 137 aaKnown RBP4.71□□□□□ -1.66
HTT-212ENST00000513639 TSKUQ8WUA8 353 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 RNF185Q96GF1 192 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 BTF3L4Q96K17 158 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 ST20Q9HBF5 79 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 OSTCQ9NRP0 149 aa4.71□□□□□ -1.66
HTT-212ENST00000513639 VCYO14598 125 aa4.7□□□□□ -1.66
HTT-212ENST00000513639 ZNF25P17030 456 aaPredicted RBP4.7□□□□□ -1.66
HTT-212ENST00000513639 SMAGPQ0VAQ4 97 aa4.7□□□□□ -1.66
HTT-212ENST00000513639 RIGQ13278 110 aa4.7□□□□□ -1.66
HTT-212ENST00000513639 TMEM241Q24JQ0 296 aa4.7□□□□□ -1.66
HTT-212ENST00000513639 LINC01551Q86U37 167 aa4.7□□□□□ -1.66
HTT-212ENST00000513639 TMEM191AQ9H0A3 160 aa4.7□□□□□ -1.66
HTT-212ENST00000513639 IGKV3OR2-268A0A0C4DH90 116 aa4.69□□□□□ -1.66
HTT-212ENST00000513639 GAGE12HA6NDE8 117 aa4.69□□□□□ -1.66
HTT-212ENST00000513639 HIGD1CA8MV81 97 aa4.69□□□□□ -1.66
HTT-212ENST00000513639 FGF6P10767 208 aa4.69□□□□□ -1.66
HTT-212ENST00000513639 RPS10P46783 165 aaKnown RBP4.69□□□□□ -1.66
HTT-212ENST00000513639 RPL37AP61513 92 aaKnown RBP4.69□□□□□ -1.66
HTT-212ENST00000513639 SERTAD4-AS1Q5TG53 156 aa4.69□□□□□ -1.66
HTT-212ENST00000513639 RPL39LQ96EH5 51 aaKnown RBP4.69□□□□□ -1.66
HTT-212ENST00000513639 MRAP2Q96G30 205 aa4.69□□□□□ -1.66
HTT-212ENST00000513639 SMDT1Q9H4I9 107 aa4.69□□□□□ -1.66
HTT-212ENST00000513639 PKIGQ9Y2B9 76 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms