RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 HMGN1P05114 100 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 HIST1H1DP16402 221 aaKnown RBP0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 S100A7L2Q5SY68 101 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 C12orf73Q69YU5 71 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 UBE2DNLQ8IWF7 75 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 ARL11Q969Q4 196 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 PDCD10Q9BUL8 212 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 LINC00470Q9BZP3 86 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 RERGLQ9H628 205 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 PIEZO2Q9H5I5 2752 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 SIPA1L3O60292 1781 aaPredicted RBP0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 CASKIN1Q8WXD9 1431 aa0.04□□□□□ -2.4
TRAPPC11-210ENST00000513600 CFTRP13569 1480 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 FLNCQ14315 2725 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 BICRAQ9NZM4 1560 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 CACNA1AO00555 2505 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 DSTQ03001 7570 aaKnown RBP0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 TRAV13-2A0A0B4J235 113 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 A0A0D9SFI3 127 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 ZNF815PA8K554 130 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 HCG22E2RYF7 251 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 SPINK8P0C7L1 97 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 CCL18P55774 89 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 BTG2P78543 158 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 Q6AWC8 147 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 CNFNQ9BYD5 112 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 SERP1Q9Y6X1 66 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 U3KQA8 63 aa0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 FLNAP21333 2647 aaKnown RBP0.03□□□□□ -2.4
TRAPPC11-210ENST00000513600 CHD8Q9HCK8 2581 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 CSPG4Q6UVK1 2322 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 FAM25AB3EWG3 89 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 FAM25CB3EWG5 89 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 FAM25GB3EWG6 89 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 K7EP13 123 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 CFAP126Q5VTH2 177 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 SSBP3-AS1Q7Z2R9 100 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 Q8N8P6 123 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 C1orf54Q8WWF1 131 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 LSM10Q969L4 123 aaKnown RBP0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 AQP10Q96PS8 301 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 TSC22D3Q99576 134 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 CYP4F30PQ9H0H9 118 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 NAA60Q9H7X0 242 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 R4GMQ9 66 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 MYH8P13535 1937 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 ZNF609O15014 1411 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 WNK1Q9H4A3 2382 aa0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 MYH7P12883 1935 aa0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 GNG7O60262 68 aa0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 PPP1R17O96001 155 aa0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 FGF7P21781 194 aa0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 RBM3P98179 157 aaKnown RBP0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 MEIG1Q5JSS6 88 aa0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 C10orf128Q5T292 105 aa0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 LENEPQ9Y5L5 61 aa0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 IFT172Q9UG01 1749 aa0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 NWD2Q9ULI1 1742 aa0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 SPEF2Q9C093 1822 aa0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 M0R135 149 aa0□□□□□ -2.41
TRAPPC11-210ENST00000513600 NAIPQ13075 1403 aa0□□□□□ -2.41
TRAPPC11-210ENST00000513600 Q56UQ5 140 aa0□□□□□ -2.41
TRAPPC11-210ENST00000513600 PPIP5K1Q6PFW1 1433 aa0□□□□□ -2.41
TRAPPC11-210ENST00000513600 CSMD3Q7Z407 3707 aa0□□□□□ -2.41
TRAPPC11-210ENST00000513600 TTC9CQ8N5M4 171 aa0□□□□□ -2.41
TRAPPC11-210ENST00000513600 SMIM4Q8WVI0 70 aa0□□□□□ -2.41
TRAPPC11-210ENST00000513600 PPP3R2Q96LZ3 170 aa0□□□□□ -2.41
TRAPPC11-210ENST00000513600 FAM107BQ9H098 131 aa0□□□□□ -2.41
TRAPPC11-210ENST00000513600 ATRQ13535 2644 aa-0□□□□□ -2.41
TRAPPC11-210ENST00000513600 PATJQ8NI35 1801 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 MRC1P22897 1456 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 VWFP04275 2813 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 PKD1L1Q8TDX9 2849 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 SPAG11BQ08648 103 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 SPAG11AQ6PDA7 123 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 SCN3BQ9NY72 215 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 DNAJC13O75165 2243 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 DOCK1Q14185 1865 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 PLXNB2O15031 1838 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 WNK3Q9BYP7 1800 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 PRDM2Q13029 1718 aa-0.01□□□□□ -2.41
TRAPPC11-210ENST00000513600 BCL9LQ86UU0 1499 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 MBD5Q9P267 1494 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 TENM4Q6N022 2769 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 CTXND1A0A1B0GTU2 59 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 APOC2P02655 101 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 IFITM1P13164 125 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 C8orf59Q8N0T1 100 aaPredicted RBP-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 AMELXQ99217 191 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 SPANXDQ9BXN6 97 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 SPRR2GQ9BYE4 73 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 NPVFQ9HCQ7 196 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 PRO0255Q9UI72 69 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 V9GYH0 126 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 FOCADQ5VW36 1801 aa-0.02□□□□□ -2.41
TRAPPC11-210ENST00000513600 DOCK2Q92608 1830 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 KDM3BQ7LBC6 1761 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 PHLPP1O60346 1717 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 ARAP2Q8WZ64 1704 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms