RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 C14orf178Q8N769 122 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-213ENST00000512665 C11orf21Q9P2W6 132 aa5.88□□□□□ -1.47
NEDD9-213ENST00000512665 PKIGQ9Y2B9 76 aa5.88□□□□□ -1.47
NEDD9-213ENST00000512665 TRBV20OR9-2A0A075B6H5 130 aa5.87□□□□□ -1.47
NEDD9-213ENST00000512665 A0A096LNI7 61 aa5.87□□□□□ -1.47
NEDD9-213ENST00000512665 PGPEP1LA6NFU8 196 aa5.87□□□□□ -1.47
NEDD9-213ENST00000512665 SRP19P09132 144 aaKnown RBP5.87□□□□□ -1.47
NEDD9-213ENST00000512665 RPS10P46783 165 aaKnown RBP5.87□□□□□ -1.47
NEDD9-213ENST00000512665 RAB14P61106 215 aa5.87□□□□□ -1.47
NEDD9-213ENST00000512665 BAGE2Q86Y30 109 aa5.87□□□□□ -1.47
NEDD9-213ENST00000512665 DERL1Q9BUN8 251 aa5.87□□□□□ -1.47
NEDD9-213ENST00000512665 MED9Q9NWA0 146 aa5.87□□□□□ -1.47
NEDD9-213ENST00000512665 TRBV10-1A0A0K0K1A3 114 aa5.86□□□□□ -1.47
NEDD9-213ENST00000512665 RAB19A4D1S5 217 aa5.86□□□□□ -1.47
NEDD9-213ENST00000512665 CXCL1P09341 107 aa5.86□□□□□ -1.47
NEDD9-213ENST00000512665 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
NEDD9-213ENST00000512665 CENPWQ5EE01 88 aa5.86□□□□□ -1.47
NEDD9-213ENST00000512665 FAM162BQ5T6X4 162 aa5.86□□□□□ -1.47
NEDD9-213ENST00000512665 EIF5A2Q9GZV4 153 aaKnown RBP5.86□□□□□ -1.47
NEDD9-213ENST00000512665 CDIP1Q9H305 208 aa5.86□□□□□ -1.47
NEDD9-213ENST00000512665 TRAV8-4A0A0B4J246 113 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 IGKV3D-20A0A0C4DH25 116 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 KRBOX1C9JBD0 128 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 C9JQL5 133 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 H0Y9J4 135 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 RHODO00212 210 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 SH2D1AO60880 128 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 P01737 135 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 CFC1BP0CG36 223 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 UBE2D3P61077 147 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 UBE2D2P62837 147 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 PEA15Q15121 130 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 FAM74A3Q4VXF1 159 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 LINC00269Q8N2A0 174 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 BIN3Q9NQY0 253 aa5.85□□□□□ -1.47
NEDD9-213ENST00000512665 A0A087WWL8 130 aa5.84□□□□□ -1.47
NEDD9-213ENST00000512665 C19orf71A6NCJ1 209 aa5.84□□□□□ -1.47
NEDD9-213ENST00000512665 CRYGAP11844 174 aa5.84□□□□□ -1.47
NEDD9-213ENST00000512665 GNG4P50150 75 aa5.84□□□□□ -1.47
NEDD9-213ENST00000512665 OCC1Q8TAD7 63 aa5.84□□□□□ -1.47
NEDD9-213ENST00000512665 TRBV7-3A0A075B6L6 115 aa5.83□□□□□ -1.48
NEDD9-213ENST00000512665 RNASE3P12724 160 aaKnown RBP5.83□□□□□ -1.48
NEDD9-213ENST00000512665 UBE2D1P51668 147 aa5.83□□□□□ -1.48
NEDD9-213ENST00000512665 RPL36AP83881 106 aaKnown RBP5.83□□□□□ -1.48
NEDD9-213ENST00000512665 CLPSL2Q6UWE3 100 aa5.83□□□□□ -1.48
NEDD9-213ENST00000512665 C15orf56Q8N910 161 aa5.83□□□□□ -1.48
NEDD9-213ENST00000512665 RPL36ALQ969Q0 106 aaKnown RBP5.83□□□□□ -1.48
NEDD9-213ENST00000512665 SSBP4Q9BWG4 385 aaPredicted RBP5.83□□□□□ -1.48
NEDD9-213ENST00000512665 IL36BQ9NZH7 164 aa5.83□□□□□ -1.48
NEDD9-213ENST00000512665 LINC00862A6NCI5 91 aa5.82□□□□□ -1.48
NEDD9-213ENST00000512665 B4DEV8 164 aa5.82□□□□□ -1.48
NEDD9-213ENST00000512665 K7EN84 100 aa5.82□□□□□ -1.48
NEDD9-213ENST00000512665 MT-ND6P03923 174 aa5.82□□□□□ -1.48
NEDD9-213ENST00000512665 RBX1P62877 108 aa5.82□□□□□ -1.48
NEDD9-213ENST00000512665 REG3AQ06141 175 aa5.82□□□□□ -1.48
NEDD9-213ENST00000512665 CFAP161Q6P656 301 aa5.82□□□□□ -1.48
NEDD9-213ENST00000512665 UQCC3Q6UW78 93 aa5.82□□□□□ -1.48
NEDD9-213ENST00000512665 FAM231DQ6ZW35 169 aa5.82□□□□□ -1.48
NEDD9-213ENST00000512665 OR10G8Q8NGN5 311 aa5.82□□□□□ -1.48
NEDD9-213ENST00000512665 SMIM7Q9BQ49 75 aa5.82□□□□□ -1.48
NEDD9-213ENST00000512665 CARHSP1Q9Y2V2 147 aaKnown RBP5.82□□□□□ -1.48
NEDD9-213ENST00000512665 ZNF727A8MUV8 499 aa5.81□□□□□ -1.48
NEDD9-213ENST00000512665 IGLV7-43P04211 117 aa5.81□□□□□ -1.48
NEDD9-213ENST00000512665 TMEM241Q24JQ0 296 aa5.81□□□□□ -1.48
NEDD9-213ENST00000512665 LINC01551Q86U37 167 aa5.81□□□□□ -1.48
NEDD9-213ENST00000512665 CHCHD5Q9BSY4 110 aa5.81□□□□□ -1.48
NEDD9-213ENST00000512665 SNAI2O43623 268 aa5.8□□□□□ -1.48
NEDD9-213ENST00000512665 OR5AL1P0C617 328 aa5.8□□□□□ -1.48
NEDD9-213ENST00000512665 IGLC6P0CF74 106 aa5.8□□□□□ -1.48
NEDD9-213ENST00000512665 RPS20P60866 119 aaKnown RBP5.8□□□□□ -1.48
NEDD9-213ENST00000512665 CT83Q5H943 113 aa5.8□□□□□ -1.48
NEDD9-213ENST00000512665 C1orf137Q5JT78 98 aa5.8□□□□□ -1.48
NEDD9-213ENST00000512665 NUDT10Q8NFP7 164 aa5.8□□□□□ -1.48
NEDD9-213ENST00000512665 NUDT11Q96G61 164 aa5.8□□□□□ -1.48
NEDD9-213ENST00000512665 OSTCQ9NRP0 149 aa5.8□□□□□ -1.48
NEDD9-213ENST00000512665 NAT8Q9UHE5 227 aa5.8□□□□□ -1.48
NEDD9-213ENST00000512665 GVQW2A0A096LPI5 108 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-213ENST00000512665 XKRY2A2RUG3 117 aa5.79□□□□□ -1.48
NEDD9-213ENST00000512665 M0R036 132 aa5.79□□□□□ -1.48
NEDD9-213ENST00000512665 ARMS2P0C7Q2 107 aa5.79□□□□□ -1.48
NEDD9-213ENST00000512665 LORP23490 312 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-213ENST00000512665 FOXA3P55318 350 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-213ENST00000512665 TMEM97Q5BJF2 176 aa5.79□□□□□ -1.48
NEDD9-213ENST00000512665 C4orf48Q5BLP8 95 aa5.79□□□□□ -1.48
NEDD9-213ENST00000512665 PRR27Q6MZM9 219 aa5.79□□□□□ -1.48
NEDD9-213ENST00000512665 CNFNQ9BYD5 112 aa5.79□□□□□ -1.48
NEDD9-213ENST00000512665 GFRA4Q9GZZ7 299 aa5.79□□□□□ -1.48
NEDD9-213ENST00000512665 F2Z2F3 143 aa5.78□□□□□ -1.48
NEDD9-213ENST00000512665 TSPAN13O95857 204 aa5.78□□□□□ -1.48
NEDD9-213ENST00000512665 S100A4P26447 101 aaKnown RBP5.78□□□□□ -1.48
NEDD9-213ENST00000512665 RPL23P62829 140 aaKnown RBP5.78□□□□□ -1.48
NEDD9-213ENST00000512665 LCE2CQ5TA81 110 aa5.78□□□□□ -1.48
NEDD9-213ENST00000512665 OR2D3Q8NGH3 330 aa5.78□□□□□ -1.48
NEDD9-213ENST00000512665 ISOC2Q96AB3 205 aa5.78□□□□□ -1.48
NEDD9-213ENST00000512665 RNASE7Q9H1E1 156 aaKnown RBP5.78□□□□□ -1.48
NEDD9-213ENST00000512665 JPT2Q9H910 190 aa5.78□□□□□ -1.48
NEDD9-213ENST00000512665 TMEM218A2RU14 115 aa5.77□□□□□ -1.49
NEDD9-213ENST00000512665 GRIFINA4D1Z8 144 aa5.77□□□□□ -1.49
NEDD9-213ENST00000512665 A8MWL6 223 aa5.77□□□□□ -1.49
NEDD9-213ENST00000512665 H3BVH4 76 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms