RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	IGLC3	P0DOY3	106 aa		5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	GYPE	P15421	78 aa		5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	PNRC1	Q12796	327 aa	Predicted RBP	5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	FHL2	Q14192	279 aa		5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	CFAP126	Q5VTH2	177 aa		5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	MRPL54	Q6P161	138 aa	Known RBP	5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	DNAJC30	Q96LL9	226 aa		5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	AP1S3	Q96PC3	154 aa		5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	KRTAP17-1	Q9BYP8	105 aa		5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	RPP21	Q9H633	154 aa	Known RBP	5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	STARD9	Q9P2P6	4700 aa		5.23	□□□□□ -1.57
NR1I3-231	ENST00000512340	GAGE10	A6NGK3	116 aa		5.22	□□□□□ -1.57
NR1I3-231	ENST00000512340		F5H697	171 aa		5.22	□□□□□ -1.57
NR1I3-231	ENST00000512340		H7C1H1	209 aa		5.22	□□□□□ -1.57
NR1I3-231	ENST00000512340	TAX1BP3	O14907	124 aa		5.22	□□□□□ -1.57
NR1I3-231	ENST00000512340	GATA1	P15976	413 aa	Predicted RBP	5.22	□□□□□ -1.57
NR1I3-231	ENST00000512340	FAM74A4	Q5TZK3	123 aa		5.22	□□□□□ -1.57
NR1I3-231	ENST00000512340	OR13C6P	Q8NH95	151 aa		5.22	□□□□□ -1.57
NR1I3-231	ENST00000512340	OCC1	Q8TAD7	63 aa		5.22	□□□□□ -1.57
NR1I3-231	ENST00000512340	SCRT2	Q9NQ03	307 aa		5.22	□□□□□ -1.57
NR1I3-231	ENST00000512340	TRAV8-6	A0A0B4J262	113 aa		5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	TRBV10-1	A0A0K0K1A3	114 aa		5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	C19orf71	A6NCJ1	209 aa		5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	SRP19	P09132	144 aa	Known RBP	5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	RPL36A	P83881	106 aa	Known RBP	5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	ZNF56	Q15929	161 aa		5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	CT83	Q5H943	113 aa		5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	AMMECR1L	Q6DCA0	310 aa		5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	FAM231D	Q6ZW35	169 aa		5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	RPL36AL	Q969Q0	106 aa	Known RBP	5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	VSIG2	Q96IQ7	327 aa		5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	CYSLTR1	Q9Y271	337 aa		5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	PAM16	Q9Y3D7	125 aa		5.21	□□□□□ -1.58
NR1I3-231	ENST00000512340	TRBV20OR9-2	A0A075B6H5	130 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340		A0A096LPF7	62 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	IGHV3-73	A0A0B4J1V6	119 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	FAM231B	A6NCW3	169 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340		A6NDN8	102 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	GAGE12J	A6NER3	117 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340		B5MCH6	92 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340		K7EQD1	137 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	IGLV2-8	P01709	118 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	TIRAP	P58753	221 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	GAGE4	Q13068	117 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	ADIRF	Q15847	76 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	KCNIP4	Q6PIL6	250 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	ERAS	Q7Z444	233 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	SLC25A29	Q8N8R3	303 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	ATP6V0E2	Q8NHE4	81 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	ANAPC13	Q9BS18	74 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	UPK3B	Q9BT76	320 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	PPDPF	Q9H3Y8	114 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340	OSTC	Q9NRP0	149 aa		5.2	□□□□□ -1.58
NR1I3-231	ENST00000512340		A0A087WWL8	130 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340		K7EP34	96 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	NXPH4	O95158	308 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	PMCH	P20382	165 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	EVI2A	P22794	236 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	HINT1	P49773	126 aa	Predicted RBP	5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	TWIST1	Q15672	202 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	SPATA45	Q537H7	98 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	TMEM97	Q5BJF2	176 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	LYZL1	Q6UWQ5	148 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	C10orf126	Q8N4M7	172 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	OR10G8	Q8NGN5	311 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	OR10AG1	Q8NH19	301 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	GFRA4	Q9GZZ7	299 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	RNASE7	Q9H1E1	156 aa	Known RBP	5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340		Q9H8V8	135 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340	LINC00588	Q9Y4M8	146 aa		5.19	□□□□□ -1.58
NR1I3-231	ENST00000512340		K7EN84	100 aa		5.18	□□□□□ -1.58
NR1I3-231	ENST00000512340	MGP	P08493	103 aa		5.18	□□□□□ -1.58
NR1I3-231	ENST00000512340	IGLC6	P0CF74	106 aa		5.18	□□□□□ -1.58
NR1I3-231	ENST00000512340	ESRG	Q1W209	222 aa		5.18	□□□□□ -1.58
NR1I3-231	ENST00000512340	OR10J3	Q5JRS4	329 aa		5.18	□□□□□ -1.58
NR1I3-231	ENST00000512340	C1orf134	Q5TEV5	83 aa		5.18	□□□□□ -1.58
NR1I3-231	ENST00000512340	LYPD5	Q6UWN5	251 aa		5.18	□□□□□ -1.58
NR1I3-231	ENST00000512340	LINC00336	Q6ZUF6	198 aa		5.18	□□□□□ -1.58
NR1I3-231	ENST00000512340	TSKU	Q8WUA8	353 aa		5.18	□□□□□ -1.58
NR1I3-231	ENST00000512340	DPH3P1	Q9H4G8	78 aa		5.18	□□□□□ -1.58
NR1I3-231	ENST00000512340	HYDIN	Q4G0P3	5121 aa		5.18	□□□□□ -1.58
NR1I3-231	ENST00000512340	IGLV2-18	A0A075B6J9	118 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	TRBV7-3	A0A075B6L6	115 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	MUC21	A0A0G2JKD1	596 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	NBDY	A0A0U1RRE5	68 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	MUC21	A0A140T8X8	626 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340		A0A1B0GUT8	65 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340		A0A1B0GX51	115 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	CRYGD	P07320	174 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	NTF3	P20783	257 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	RPS28	P62857	69 aa	Known RBP	5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	RIG	Q13278	110 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	PMCHL1	Q16048	86 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	GAGE13	Q4V321	117 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	LELP1	Q5T871	98 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	NFE4	Q86UQ8	179 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	C14orf178	Q8N769	122 aa	Predicted RBP	5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	ZNRF2	Q8NHG8	242 aa		5.17	□□□□□ -1.58
NR1I3-231	ENST00000512340	SAMD10	Q9BYL1	202 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms