RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 APOC3P02656 99 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 IFITM1P13164 125 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 CCL18P55774 89 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 PPP3R1P63098 170 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 HAMPP81172 84 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 COMMD6Q7Z4G1 85 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 BAGE2Q86Y30 109 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 TSLPQ969D9 159 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 DOCK11Q5JSL3 2073 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 TANC1Q9C0D5 1861 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 PPIP5K1Q6PFW1 1433 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 MEGF8Q7Z7M0 2845 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 UBE2L5PA0A1B0GUS4 154 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 G3V318 75 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 CFDP00746 253 aaPredicted RBP0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 GNG4P50150 75 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 GNG11P61952 73 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 UBE2L3P68036 154 aaKnown RBP0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 DCDP81605 110 aaKnown RBP0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 COX17Q14061 63 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 WHAMMP3Q1A5X7 153 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 C2orf88Q9BSF0 95 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 DPH3P1Q9H4G8 78 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 UQCR10Q9UDW1 63 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 KDM6BO15054 1643 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 MYH6P13533 1939 aa0.22□□□□□ -2.37
TRAPPC11-207ENST00000511409 CASKIN1Q8WXD9 1431 aa0.21□□□□□ -2.38
TRAPPC11-207ENST00000511409 IGLC7A0M8Q6 106 aa0.21□□□□□ -2.38
TRAPPC11-207ENST00000511409 C20orf202A1L168 122 aa0.21□□□□□ -2.38
TRAPPC11-207ENST00000511409 CHKB-CPT1BH3BT56 60 aa0.21□□□□□ -2.38
TRAPPC11-207ENST00000511409 GTF2H5Q6ZYL4 71 aa0.21□□□□□ -2.38
TRAPPC11-207ENST00000511409 CNFNQ9BYD5 112 aa0.21□□□□□ -2.38
TRAPPC11-207ENST00000511409 FAIMQ9NVQ4 179 aa0.21□□□□□ -2.38
TRAPPC11-207ENST00000511409 SPCS1Q9Y6A9 102 aa0.21□□□□□ -2.38
TRAPPC11-207ENST00000511409 LINC01558Q9Y6Z2 57 aa0.21□□□□□ -2.38
TRAPPC11-207ENST00000511409 BDP1A6H8Y1 2624 aa0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 PLXNA2O75051 1894 aa0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 VIRMAQ69YN4 1812 aaKnown RBP0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 BICRAQ9NZM4 1560 aa0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 KIAA0100Q14667 2235 aaKnown RBP0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 TRAV22A0A0B4J277 110 aa0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 LINC00587B1AMM8 73 aa0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 HMGN4O00479 90 aa0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 SFT2D2O95562 160 aa0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 ATP5EP56381 51 aaPredicted RBP0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 UBA52P62987 128 aaKnown RBP0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 NDUFA4L2Q9NRX3 87 aa0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 LINC00474Q9P2X8 69 aa0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 U3KQA8 63 aa0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 ANKRD17O75179 2603 aaKnown RBP0.2□□□□□ -2.38
TRAPPC11-207ENST00000511409 MYO7AQ13402 2215 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 MED13LQ71F56 2210 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 SSC5DA1L4H1 1573 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 TPRP12270 2363 aaKnown RBP0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 NRXN2Q9P2S2 1712 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 ZNF142P52746 1687 aaPredicted RBP0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 H3BQ15 152 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 M0R3E3 92 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 BCE1O60756 84 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 S100PP25815 95 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 KRTDAPP60985 99 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 Q6JHZ5 121 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 AMELXQ99217 191 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 NXT2Q9NPJ8 142 aaKnown RBP0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 MANBALQ9NQG1 85 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 PRO0255Q9UI72 69 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 ARL2-SNX15V9GYD0 113 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 MAP2P11137 1827 aaKnown RBP0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 ZNF609O15014 1411 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 CPSF1Q10570 1443 aaKnown RBP0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 SMG6Q86US8 1419 aaKnown RBP0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 LAMC3Q9Y6N6 1575 aa0.19□□□□□ -2.38
TRAPPC11-207ENST00000511409 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 PHIPQ8WWQ0 1821 aa0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 NAP1L6A6NFF2 107 aa0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 MGPP08493 103 aa0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 IGLC1P0CG04 106 aa0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 TRAPPC2P0DI81 140 aa0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 TRAPPC2BP0DI82 140 aa0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 SNCAP37840 140 aa0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 Q8IZM0 81 aa0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 MYOM3Q5VTT5 1437 aa0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 AKAP11Q9UKA4 1901 aa0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 CADP27708 2225 aa0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 PTPRZ1P23471 2315 aaPredicted RBP0.18□□□□□ -2.38
TRAPPC11-207ENST00000511409 MRC1P22897 1456 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 GOLGA3Q08378 1498 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 MBD5Q9P267 1494 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 SHANK2Q9UPX8 1470 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 LRRC37A3O60309 1634 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 MUC22E2RYF6 1773 aaPredicted RBP0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 F5P12259 2224 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 A0A1B0GWA3 101 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 COX6CP09669 75 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 HSD52Q0P140 79 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 PIGYQ3MUY2 71 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 SFTA2Q6UW10 78 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 TMEM263Q8WUH6 116 aaKnown RBP0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 FAM167A-AS1Q96KT0 104 aa0.17□□□□□ -2.38
TRAPPC11-207ENST00000511409 C12orf57Q99622 126 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms