RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 WFDC10AQ9H1F0 79 aa6.98□□□□□ -1.29
POLR2J3-215ENST00000511313 MUC21A0A0G2JKD1 596 aa6.97□□□□□ -1.29
POLR2J3-215ENST00000511313 MUC21A0A140T8X8 626 aa6.97□□□□□ -1.29
POLR2J3-215ENST00000511313 NBDYA0A0U1RRE5 68 aa6.97□□□□□ -1.29
POLR2J3-215ENST00000511313 TIMM17AQ99595 171 aa6.97□□□□□ -1.29
POLR2J3-215ENST00000511313 MDFICQ9P1T7 246 aa6.97□□□□□ -1.29
POLR2J3-215ENST00000511313 C12orf74Q32Q52 190 aa6.97□□□□□ -1.29
POLR2J3-215ENST00000511313 CYYR1Q96J86 154 aa6.97□□□□□ -1.29
POLR2J3-215ENST00000511313 SORL1Q92673 2214 aa6.97□□□□□ -1.29
POLR2J3-215ENST00000511313 IGLV2-18A0A075B6J9 118 aa6.97□□□□□ -1.29
POLR2J3-215ENST00000511313 LINC01545Q5VT33 79 aa6.97□□□□□ -1.29
POLR2J3-215ENST00000511313 OR10D4PQ8NGN7 298 aa6.97□□□□□ -1.29
POLR2J3-215ENST00000511313 IGLV4-69A0A075B6H9 119 aa6.96□□□□□ -1.29
POLR2J3-215ENST00000511313 LINC01561Q8N1V8 128 aa6.96□□□□□ -1.3
POLR2J3-215ENST00000511313 PSMB2P49721 201 aa6.96□□□□□ -1.3
POLR2J3-215ENST00000511313 GAGE12HA6NDE8 117 aa6.96□□□□□ -1.3
POLR2J3-215ENST00000511313 RPL18AQ02543 176 aaKnown RBP6.96□□□□□ -1.3
POLR2J3-215ENST00000511313 SYCNQ0VAF6 134 aa6.96□□□□□ -1.3
POLR2J3-215ENST00000511313 MRPL51Q4U2R6 128 aaKnown RBP6.96□□□□□ -1.3
POLR2J3-215ENST00000511313 COX8CQ7Z4L0 72 aa6.96□□□□□ -1.3
POLR2J3-215ENST00000511313 ZNF479Q96JC4 524 aa6.96□□□□□ -1.3
POLR2J3-215ENST00000511313 FOXA3P55318 350 aaPredicted RBP6.95□□□□□ -1.3
POLR2J3-215ENST00000511313 A6NDN8 102 aa6.95□□□□□ -1.3
POLR2J3-215ENST00000511313 M0R2N4 97 aa6.95□□□□□ -1.3
POLR2J3-215ENST00000511313 XCL1P47992 114 aa6.95□□□□□ -1.3
POLR2J3-215ENST00000511313 IGKCP01834 107 aa6.95□□□□□ -1.3
POLR2J3-215ENST00000511313 UBE2AP49459 152 aa6.95□□□□□ -1.3
POLR2J3-215ENST00000511313 A8MTW9 85 aa6.94□□□□□ -1.3
POLR2J3-215ENST00000511313 KRTAP10-11P60412 298 aa6.94□□□□□ -1.3
POLR2J3-215ENST00000511313 CBLN2Q8IUK8 224 aa6.94□□□□□ -1.3
POLR2J3-215ENST00000511313 ZNF726P1Q15940 193 aa6.94□□□□□ -1.3
POLR2J3-215ENST00000511313 ATRAIDQ6UW56 229 aa6.94□□□□□ -1.3
POLR2J3-215ENST00000511313 CD164L2Q6UWJ8 174 aa6.94□□□□□ -1.3
POLR2J3-215ENST00000511313 ETDCA0A1B0GVM5 59 aa6.93□□□□□ -1.3
POLR2J3-215ENST00000511313 UBE2D1P51668 147 aa6.93□□□□□ -1.3
POLR2J3-215ENST00000511313 KRTAP10-3P60369 221 aa6.93□□□□□ -1.3
POLR2J3-215ENST00000511313 Q8NAQ8 132 aa6.93□□□□□ -1.3
POLR2J3-215ENST00000511313 RNF185Q96GF1 192 aa6.93□□□□□ -1.3
POLR2J3-215ENST00000511313 CHAC1Q9BUX1 264 aa6.93□□□□□ -1.3
POLR2J3-215ENST00000511313 C16orf90A8MZG2 172 aa6.93□□□□□ -1.3
POLR2J3-215ENST00000511313 UBE2D3P61077 147 aa6.93□□□□□ -1.3
POLR2J3-215ENST00000511313 UBE2D2P62837 147 aa6.93□□□□□ -1.3
POLR2J3-215ENST00000511313 NIT1Q86X76 327 aa6.92□□□□□ -1.3
POLR2J3-215ENST00000511313 MRPS12O15235 138 aaKnown RBP6.92□□□□□ -1.3
POLR2J3-215ENST00000511313 IGLC6P0CF74 106 aa6.92□□□□□ -1.3
POLR2J3-215ENST00000511313 C9JQL5 133 aa6.92□□□□□ -1.3
POLR2J3-215ENST00000511313 REG3GQ6UW15 175 aa6.92□□□□□ -1.3
POLR2J3-215ENST00000511313 Q6ZVH6 145 aa6.92□□□□□ -1.3
POLR2J3-215ENST00000511313 A0A1B0GUV1 79 aa6.92□□□□□ -1.3
POLR2J3-215ENST00000511313 X6R8D5 127 aa6.92□□□□□ -1.3
POLR2J3-215ENST00000511313 GAGE2BQ13066 116 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 FHL2Q14192 279 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 LYPD5Q6UWN5 251 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 C20orf203Q8NBC4 194 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 CHCHD10Q8WYQ3 142 aaPredicted RBP6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 V9GYV3 84 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 C19orf71A6NCJ1 209 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 MRPS36P82909 103 aaKnown RBP6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 GDF5OSQ5U4N7 250 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 C2orf48Q96LS8 159 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 NOTCH3Q9UM47 2321 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 NEXN-AS1Q8NBZ9 246 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 PYGO1Q9Y3Y4 419 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 POLQO75417 2590 aa6.91□□□□□ -1.3
POLR2J3-215ENST00000511313 TLN2Q9Y4G6 2542 aa6.9□□□□□ -1.3
POLR2J3-215ENST00000511313 FN1P02751 2386 aaKnown RBP6.9□□□□□ -1.3
POLR2J3-215ENST00000511313 ZNF815PA8K554 130 aa6.9□□□□□ -1.3
POLR2J3-215ENST00000511313 SSBP4Q9BWG4 385 aaPredicted RBP6.9□□□□□ -1.3
POLR2J3-215ENST00000511313 ARHGAP32A7KAX9 2087 aa6.9□□□□□ -1.3
POLR2J3-215ENST00000511313 RBX1P62877 108 aa6.9□□□□□ -1.3
POLR2J3-215ENST00000511313 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.31
POLR2J3-215ENST00000511313 STPG4Q8N801 248 aa6.9□□□□□ -1.31
POLR2J3-215ENST00000511313 LYPD6BQ8NI32 183 aa6.9□□□□□ -1.31
POLR2J3-215ENST00000511313 WDFY4Q6ZS81 3184 aa6.9□□□□□ -1.31
POLR2J3-215ENST00000511313 LCE6AA0A183 80 aa6.89□□□□□ -1.31
POLR2J3-215ENST00000511313 COX7B2Q8TF08 81 aa6.89□□□□□ -1.31
POLR2J3-215ENST00000511313 UPK3BQ9BT76 320 aa6.89□□□□□ -1.31
POLR2J3-215ENST00000511313 WNK1Q9H4A3 2382 aa6.89□□□□□ -1.31
POLR2J3-215ENST00000511313 IFITM1P13164 125 aa6.89□□□□□ -1.31
POLR2J3-215ENST00000511313 LINC00269Q8N2A0 174 aa6.89□□□□□ -1.31
POLR2J3-215ENST00000511313 IGKV3D-20A0A0C4DH25 116 aa6.89□□□□□ -1.31
POLR2J3-215ENST00000511313 HIST1H4GQ99525 98 aa6.89□□□□□ -1.31
POLR2J3-215ENST00000511313 TRAV13-2A0A0B4J235 113 aa6.89□□□□□ -1.31
POLR2J3-215ENST00000511313 TRBV30A0A0K0K1B3 111 aa6.88□□□□□ -1.31
POLR2J3-215ENST00000511313 IBA57-AS1B1ANH7 110 aa6.88□□□□□ -1.31
POLR2J3-215ENST00000511313 J3QR89 54 aa6.88□□□□□ -1.31
POLR2J3-215ENST00000511313 RBMY1FQ15415 496 aaKnown RBP6.88□□□□□ -1.31
POLR2J3-215ENST00000511313 TMEM126AQ9H061 195 aa6.88□□□□□ -1.31
POLR2J3-215ENST00000511313 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
POLR2J3-215ENST00000511313 KIAA1644Q3SXP7 199 aa6.88□□□□□ -1.31
POLR2J3-215ENST00000511313 LINC00476Q8WZB0 136 aa6.88□□□□□ -1.31
POLR2J3-215ENST00000511313 C5orf52A6NGY3 159 aa6.88□□□□□ -1.31
POLR2J3-215ENST00000511313 WDR87Q6ZQQ6 2873 aa6.87□□□□□ -1.31
POLR2J3-215ENST00000511313 RPL28P46779 137 aaKnown RBP6.87□□□□□ -1.31
POLR2J3-215ENST00000511313 CSDC2Q9Y534 153 aaKnown RBP6.87□□□□□ -1.31
POLR2J3-215ENST00000511313 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.87□□□□□ -1.31
POLR2J3-215ENST00000511313 IGKV2-29A2NJV5 120 aaPredicted RBP6.87□□□□□ -1.31
POLR2J3-215ENST00000511313 F8VRH5 84 aa6.87□□□□□ -1.31
POLR2J3-215ENST00000511313 M0QY20 66 aa6.86□□□□□ -1.31
POLR2J3-215ENST00000511313 CASC10Q5T4H9 136 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms