RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 C15orf53Q8NAA6 179 aa6.62□□□□□ -1.35
SNF8-210ENST00000511214 TRAV4A0A0B4J268 109 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 TEX49A0A1B0GTD5 131 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 GAGE12JA6NER3 117 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 GAGE7O76087 117 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 NHLRC4P0CG21 123 aaPredicted RBP6.61□□□□□ -1.35
SNF8-210ENST00000511214 GAGE12FP0CL80 117 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 GAGE12GP0CL81 117 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 GAGE12IP0CL82 117 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 RBMY1A1P0DJD3 496 aaKnown RBP6.61□□□□□ -1.35
SNF8-210ENST00000511214 RBMY1CP0DJD4 496 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 HOXD3P31249 432 aaPredicted RBP6.61□□□□□ -1.35
SNF8-210ENST00000511214 GAGE4Q13068 117 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 RBMY1FQ15415 496 aaKnown RBP6.61□□□□□ -1.35
SNF8-210ENST00000511214 DEFB112Q30KQ8 113 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 LINC01356Q8N9X3 169 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 DUX3Q96PT4 197 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 CSDC2Q9Y534 153 aaKnown RBP6.61□□□□□ -1.35
SNF8-210ENST00000511214 DMXL1Q9Y485 3027 aa6.61□□□□□ -1.35
SNF8-210ENST00000511214 TRBV7-7A0A0K0K1E9 115 aa6.6□□□□□ -1.35
SNF8-210ENST00000511214 COX7A2LO14548 114 aa6.6□□□□□ -1.35
SNF8-210ENST00000511214 IGHV4-59P01825 116 aa6.6□□□□□ -1.35
SNF8-210ENST00000511214 GNLYP22749 145 aa6.6□□□□□ -1.35
SNF8-210ENST00000511214 TMEM95Q3KNT9 176 aa6.6□□□□□ -1.35
SNF8-210ENST00000511214 DUX5Q96PT3 197 aa6.6□□□□□ -1.35
SNF8-210ENST00000511214 IMUPQ9GZP8 106 aa6.6□□□□□ -1.35
SNF8-210ENST00000511214 BEX4Q9NWD9 120 aaPredicted RBP6.6□□□□□ -1.35
SNF8-210ENST00000511214 PEMTQ9UBM1 199 aa6.6□□□□□ -1.35
SNF8-210ENST00000511214 VPREB3Q9UKI3 123 aa6.6□□□□□ -1.35
SNF8-210ENST00000511214 MGAQ8IWI9 3026 aa6.6□□□□□ -1.35
SNF8-210ENST00000511214 ADARB2-AS1A8MUL3 147 aa6.59□□□□□ -1.35
SNF8-210ENST00000511214 DEFB131AP59861 70 aa6.59□□□□□ -1.35
SNF8-210ENST00000511214 HERV-K104P63124 156 aa6.59□□□□□ -1.35
SNF8-210ENST00000511214 C11orf72Q8NBR9 251 aa6.59□□□□□ -1.35
SNF8-210ENST00000511214 ABCA2Q9BZC7 2435 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 SPTBN2O15020 2390 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 SPTBN4Q9H254 2564 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.58□□□□□ -1.36
SNF8-210ENST00000511214 TRBV10-1A0A0K0K1A3 114 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 IGKV2-29A2NJV5 120 aaPredicted RBP6.58□□□□□ -1.36
SNF8-210ENST00000511214 RBMY1BA6NDE4 496 aaKnown RBP6.58□□□□□ -1.36
SNF8-210ENST00000511214 RBMY1EA6NEQ0 496 aaKnown RBP6.58□□□□□ -1.36
SNF8-210ENST00000511214 KNCNA6PVL3 124 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 CRLF1O75462 422 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 FSHBP01225 129 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 INSP01308 110 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 TRACP01848 142 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 RBMY1DP0C7P1 496 aaKnown RBP6.58□□□□□ -1.36
SNF8-210ENST00000511214 PROK1P58294 105 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 DGAT2L7PQ6IED9 249 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 CEMP1Q6PRD7 247 aaPredicted RBP6.58□□□□□ -1.36
SNF8-210ENST00000511214 Q6YL49 198 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 LINC00308Q8TCZ7 52 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 TMEM101Q96IK0 257 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 ZNF702PQ9H963 129 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 CDKN2A-AS1Q9UH64 79 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 PIEZO1Q92508 2521 aa6.58□□□□□ -1.36
SNF8-210ENST00000511214 BSNQ9UPA5 3926 aa6.57□□□□□ -1.36
SNF8-210ENST00000511214 IGHV3-73A0A0B4J1V6 119 aa6.57□□□□□ -1.36
SNF8-210ENST00000511214 PF4P02776 101 aa6.57□□□□□ -1.36
SNF8-210ENST00000511214 LY6DQ14210 128 aa6.57□□□□□ -1.36
SNF8-210ENST00000511214 FAM222AQ5U5X8 452 aa6.57□□□□□ -1.36
SNF8-210ENST00000511214 SHISA2Q6UWI4 295 aa6.57□□□□□ -1.36
SNF8-210ENST00000511214 C10orf99Q6UWK7 81 aa6.57□□□□□ -1.36
SNF8-210ENST00000511214 Q6ZSN1 163 aa6.57□□□□□ -1.36
SNF8-210ENST00000511214 Q8N2B8 174 aa6.57□□□□□ -1.36
SNF8-210ENST00000511214 CITED2Q99967 270 aaPredicted RBP6.57□□□□□ -1.36
SNF8-210ENST00000511214 TRAV25A0A0B4J276 109 aa6.56□□□□□ -1.36
SNF8-210ENST00000511214 DAZ2Q13117 558 aaKnown RBP6.56□□□□□ -1.36
SNF8-210ENST00000511214 DAZ4Q86SG3 579 aaKnown RBP6.56□□□□□ -1.36
SNF8-210ENST00000511214 IL17DQ8TAD2 202 aa6.56□□□□□ -1.36
SNF8-210ENST00000511214 CLEC2BQ92478 149 aa6.56□□□□□ -1.36
SNF8-210ENST00000511214 LINC01587Q99440 93 aa6.56□□□□□ -1.36
SNF8-210ENST00000511214 OVOL2Q9BRP0 275 aa6.56□□□□□ -1.36
SNF8-210ENST00000511214 MAP6D1Q9H9H5 199 aa6.56□□□□□ -1.36
SNF8-210ENST00000511214 DAZ3Q9NR90 486 aaKnown RBP6.56□□□□□ -1.36
SNF8-210ENST00000511214 HRNRQ86YZ3 2850 aaPredicted RBP6.55□□□□□ -1.36
SNF8-210ENST00000511214 IGHV3OR16-12A0A075B7B8 117 aa6.55□□□□□ -1.36
SNF8-210ENST00000511214 A0A096LNT2 108 aa6.55□□□□□ -1.36
SNF8-210ENST00000511214 B5MCH6 92 aa6.55□□□□□ -1.36
SNF8-210ENST00000511214 ATP5G1P05496 136 aa6.55□□□□□ -1.36
SNF8-210ENST00000511214 RNASE13Q5GAN3 156 aaKnown RBP6.55□□□□□ -1.36
SNF8-210ENST00000511214 LINC00242Q5T6M2 205 aa6.55□□□□□ -1.36
SNF8-210ENST00000511214 DAND5Q8N907 189 aa6.55□□□□□ -1.36
SNF8-210ENST00000511214 C4orf3Q8WVX3 66 aa6.55□□□□□ -1.36
SNF8-210ENST00000511214 Q9H8V8 135 aa6.55□□□□□ -1.36
SNF8-210ENST00000511214 BOD1L1Q8NFC6 3051 aa6.55□□□□□ -1.36
SNF8-210ENST00000511214 MED13LQ71F56 2210 aa6.54□□□□□ -1.36
SNF8-210ENST00000511214 SMG1Q96Q15 3661 aaKnown RBP6.54□□□□□ -1.36
SNF8-210ENST00000511214 ADGRG4Q8IZF6 3080 aa6.54□□□□□ -1.36
SNF8-210ENST00000511214 A8MZ25 164 aa6.54□□□□□ -1.36
SNF8-210ENST00000511214 SMIM1B2RUZ4 78 aa6.54□□□□□ -1.36
SNF8-210ENST00000511214 HTN1P15515 57 aa6.54□□□□□ -1.36
SNF8-210ENST00000511214 RPL36AP83881 106 aaKnown RBP6.54□□□□□ -1.36
SNF8-210ENST00000511214 SDIM1Q6ZPB5 146 aa6.54□□□□□ -1.36
SNF8-210ENST00000511214 LINC00643Q86TS7 51 aa6.54□□□□□ -1.36
SNF8-210ENST00000511214 RPL36ALQ969Q0 106 aaKnown RBP6.54□□□□□ -1.36
SNF8-210ENST00000511214 ZNF625Q96I27 306 aaPredicted RBP6.54□□□□□ -1.36
SNF8-210ENST00000511214 PRRC2AP48634 2157 aaKnown RBP6.54□□□□□ -1.36
SNF8-210ENST00000511214 SPTA1P02549 2419 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms