RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 BIN3Q9NQY0 253 aa5.56□□□□□ -1.52
PDGFC-206ENST00000510982 AP5S1Q9NUS5 200 aa5.56□□□□□ -1.52
PDGFC-206ENST00000510982 PANO1I0J062 215 aa5.55□□□□□ -1.52
PDGFC-206ENST00000510982 PDE6DO43924 150 aa5.55□□□□□ -1.52
PDGFC-206ENST00000510982 SULT1A2P50226 295 aa5.55□□□□□ -1.52
PDGFC-206ENST00000510982 HNRNPA3P51991 378 aaKnown RBP5.55□□□□□ -1.52
PDGFC-206ENST00000510982 MEF2BQ02080 365 aaPredicted RBP5.55□□□□□ -1.52
PDGFC-206ENST00000510982 COTL1Q14019 142 aa5.55□□□□□ -1.52
PDGFC-206ENST00000510982 TWIST1Q15672 202 aa5.55□□□□□ -1.52
PDGFC-206ENST00000510982 C9orf62Q8N4C0 152 aa5.55□□□□□ -1.52
PDGFC-206ENST00000510982 NUDT10Q8NFP7 164 aa5.55□□□□□ -1.52
PDGFC-206ENST00000510982 NUDT11Q96G61 164 aa5.55□□□□□ -1.52
PDGFC-206ENST00000510982 GFRA4Q9GZZ7 299 aa5.55□□□□□ -1.52
PDGFC-206ENST00000510982 IGHV3-64A0A075B6Q5 118 aa5.54□□□□□ -1.52
PDGFC-206ENST00000510982 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.54□□□□□ -1.52
PDGFC-206ENST00000510982 SLPIP03973 132 aa5.54□□□□□ -1.52
PDGFC-206ENST00000510982 AMTP48728 403 aa5.54□□□□□ -1.52
PDGFC-206ENST00000510982 CNBPP62633 177 aaKnown RBP5.54□□□□□ -1.52
PDGFC-206ENST00000510982 WDR73Q6P4I2 378 aa5.54□□□□□ -1.52
PDGFC-206ENST00000510982 PGLYRP4Q96LB8 373 aa5.54□□□□□ -1.52
PDGFC-206ENST00000510982 PLA2G2DQ9UNK4 145 aa5.54□□□□□ -1.52
PDGFC-206ENST00000510982 TRBV20OR9-2A0A075B6H5 130 aa5.53□□□□□ -1.52
PDGFC-206ENST00000510982 IGKV3OR2-268A0A0C4DH90 116 aa5.53□□□□□ -1.52
PDGFC-206ENST00000510982 BCL2P10415 239 aa5.53□□□□□ -1.52
PDGFC-206ENST00000510982 CFAP161Q6P656 301 aa5.53□□□□□ -1.52
PDGFC-206ENST00000510982 A0A087WYN8 130 aa5.52□□□□□ -1.53
PDGFC-206ENST00000510982 TRAV26-2A0A0B4J265 109 aa5.52□□□□□ -1.53
PDGFC-206ENST00000510982 GAGE12HA6NDE8 117 aa5.52□□□□□ -1.53
PDGFC-206ENST00000510982 CHTF8P0CG12 524 aa5.52□□□□□ -1.53
PDGFC-206ENST00000510982 CIRBPQ14011 172 aaKnown RBP5.52□□□□□ -1.53
PDGFC-206ENST00000510982 AMMECR1LQ6DCA0 310 aa5.52□□□□□ -1.53
PDGFC-206ENST00000510982 GATD1Q8NB37 220 aa5.52□□□□□ -1.53
PDGFC-206ENST00000510982 OCC1Q8TAD7 63 aa5.52□□□□□ -1.53
PDGFC-206ENST00000510982 RNASE7Q9H1E1 156 aaKnown RBP5.52□□□□□ -1.53
PDGFC-206ENST00000510982 LORP23490 312 aaPredicted RBP5.51□□□□□ -1.53
PDGFC-206ENST00000510982 TAGLN2P37802 199 aaKnown RBP5.51□□□□□ -1.53
PDGFC-206ENST00000510982 CTRLP40313 264 aa5.51□□□□□ -1.53
PDGFC-206ENST00000510982 RPS10P46783 165 aaKnown RBP5.51□□□□□ -1.53
PDGFC-206ENST00000510982 COX6A2Q02221 97 aa5.51□□□□□ -1.53
PDGFC-206ENST00000510982 RNASEKQ6P5S7 137 aaKnown RBP5.51□□□□□ -1.53
PDGFC-206ENST00000510982 Q6ZRU5 148 aa5.51□□□□□ -1.53
PDGFC-206ENST00000510982 SMIM15Q7Z3B0 74 aa5.51□□□□□ -1.53
PDGFC-206ENST00000510982 RNF185Q96GF1 192 aa5.51□□□□□ -1.53
PDGFC-206ENST00000510982 CNFNQ9BYD5 112 aa5.51□□□□□ -1.53
PDGFC-206ENST00000510982 RPP21Q9H633 154 aaKnown RBP5.51□□□□□ -1.53
PDGFC-206ENST00000510982 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
PDGFC-206ENST00000510982 LRP1Q07954 4544 aaKnown RBP5.51□□□□□ -1.53
PDGFC-206ENST00000510982 FOXA3P55318 350 aaPredicted RBP5.5□□□□□ -1.53
PDGFC-206ENST00000510982 HIGD2BQ4VC39 106 aa5.5□□□□□ -1.53
PDGFC-206ENST00000510982 TEX261Q6UWH6 196 aa5.5□□□□□ -1.53
PDGFC-206ENST00000510982 Q6ZNX1 250 aa5.5□□□□□ -1.53
PDGFC-206ENST00000510982 SLC51BQ86UW2 128 aa5.5□□□□□ -1.53
PDGFC-206ENST00000510982 SPACA4Q8TDM5 124 aa5.5□□□□□ -1.53
PDGFC-206ENST00000510982 CHCHD10Q8WYQ3 142 aaPredicted RBP5.5□□□□□ -1.53
PDGFC-206ENST00000510982 RPL39LQ96EH5 51 aaKnown RBP5.5□□□□□ -1.53
PDGFC-206ENST00000510982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.49□□□□□ -1.53
PDGFC-206ENST00000510982 IGKV2-29A2NJV5 120 aaPredicted RBP5.49□□□□□ -1.53
PDGFC-206ENST00000510982 H7C423 109 aa5.49□□□□□ -1.53
PDGFC-206ENST00000510982 K7EN84 100 aa5.49□□□□□ -1.53
PDGFC-206ENST00000510982 NCR2O95944 276 aa5.49□□□□□ -1.53
PDGFC-206ENST00000510982 APCSP02743 223 aa5.49□□□□□ -1.53
PDGFC-206ENST00000510982 FGF6P10767 208 aa5.49□□□□□ -1.53
PDGFC-206ENST00000510982 PMCHP20382 165 aa5.49□□□□□ -1.53
PDGFC-206ENST00000510982 MAJINQ3KP22 176 aa5.49□□□□□ -1.53
PDGFC-206ENST00000510982 C15orf56Q8N910 161 aa5.49□□□□□ -1.53
PDGFC-206ENST00000510982 C7orf33Q8WU49 177 aa5.49□□□□□ -1.53
PDGFC-206ENST00000510982 GTSF1Q8WW33 167 aa5.49□□□□□ -1.53
PDGFC-206ENST00000510982 IGKV2-24A0A0C4DH68 120 aa5.48□□□□□ -1.53
PDGFC-206ENST00000510982 SDHAF1A6NFY7 115 aa5.48□□□□□ -1.53
PDGFC-206ENST00000510982 A8MWL6 223 aa5.48□□□□□ -1.53
PDGFC-206ENST00000510982 I3L3M4 83 aa5.48□□□□□ -1.53
PDGFC-206ENST00000510982 PHOX2AO14813 284 aa5.48□□□□□ -1.53
PDGFC-206ENST00000510982 GATCO43716 136 aaKnown RBP5.48□□□□□ -1.53
PDGFC-206ENST00000510982 NDUFS6O75380 124 aaKnown RBP5.48□□□□□ -1.53
PDGFC-206ENST00000510982 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
PDGFC-206ENST00000510982 TCTE3Q8IZS6 198 aa5.48□□□□□ -1.53
PDGFC-206ENST00000510982 PRSS3P2Q8NHM4 247 aa5.48□□□□□ -1.53
PDGFC-206ENST00000510982 BTF3L4Q96K17 158 aa5.48□□□□□ -1.53
PDGFC-206ENST00000510982 PLAC8Q9NZF1 115 aa5.48□□□□□ -1.53
PDGFC-206ENST00000510982 FAM231BA6NCW3 169 aa5.47□□□□□ -1.53
PDGFC-206ENST00000510982 XP32Q5T750 250 aa5.47□□□□□ -1.53
PDGFC-206ENST00000510982 LYPD6BQ8NI32 183 aa5.47□□□□□ -1.53
PDGFC-206ENST00000510982 TMEM101Q96IK0 257 aa5.47□□□□□ -1.53
PDGFC-206ENST00000510982 GVQW2A0A096LPI5 108 aaPredicted RBP5.46□□□□□ -1.54
PDGFC-206ENST00000510982 TMEM250H0YL14 139 aa5.46□□□□□ -1.54
PDGFC-206ENST00000510982 ZNF25P17030 456 aaPredicted RBP5.46□□□□□ -1.54
PDGFC-206ENST00000510982 XCL1P47992 114 aa5.46□□□□□ -1.54
PDGFC-206ENST00000510982 CEBPGP53567 150 aa5.46□□□□□ -1.54
PDGFC-206ENST00000510982 BLOC1S1P78537 153 aa5.46□□□□□ -1.54
PDGFC-206ENST00000510982 FOXI1Q12951 378 aa5.46□□□□□ -1.54
PDGFC-206ENST00000510982 FAM231DQ6ZW35 169 aa5.46□□□□□ -1.54
PDGFC-206ENST00000510982 STPG4Q8N801 248 aa5.46□□□□□ -1.54
PDGFC-206ENST00000510982 OR5A1Q8NGJ0 315 aa5.46□□□□□ -1.54
PDGFC-206ENST00000510982 BORCS7Q96B45 105 aa5.46□□□□□ -1.54
PDGFC-206ENST00000510982 ST20Q9HBF5 79 aa5.46□□□□□ -1.54
PDGFC-206ENST00000510982 TRBV6-5A0A0K0K1A5 114 aa5.45□□□□□ -1.54
PDGFC-206ENST00000510982 LINC00959A0A1B0GUT2 108 aa5.45□□□□□ -1.54
PDGFC-206ENST00000510982 CCL25O15444 150 aa5.45□□□□□ -1.54
PDGFC-206ENST00000510982 GAS8-AS1O95177 125 aa5.45□□□□□ -1.54
PDGFC-206ENST00000510982 SS18Q15532 418 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms